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Aliases for JDP2 Gene

Aliases for JDP2 Gene

  • Jun Dimerization Protein 2 2 3
  • Progesterone Receptor Co-Activator 2 3
  • JUNDM2 3

External Ids for JDP2 Gene

Previous GeneCards Identifiers for JDP2 Gene

  • GC14P073410
  • GC14P069722
  • GC14P073884
  • GC14P073888
  • GC14P074964
  • GC14P075894
  • GC14P056063

Summaries for JDP2 Gene

GeneCards Summary for JDP2 Gene

JDP2 (Jun Dimerization Protein 2) is a Protein Coding gene. Diseases associated with JDP2 include skeletal muscle neoplasm. Among its related pathways are ATF-2 transcription factor network and Tacrolimus/Cyclosporine Pathway, Pharmacodynamics. GO annotations related to this gene include sequence-specific DNA binding transcription factor activity and protein heterodimerization activity. An important paralog of this gene is ATF3.

UniProtKB/Swiss-Prot for JDP2 Gene

  • Component of the AP-1 transcription factor that represses transactivation mediated by the Jun family of proteins. Involved in a variety of transcriptional responses associated with AP-1 such as UV-induced apoptosis, cell differentiation, tumorigenesis and antitumogeneris. Can also function as a repressor by recruiting histone deacetylase 3/HDAC3 to the promoter region of JUN. May control transcription via direct regulation of the modification of histones and the assembly of chromatin.

Gene Wiki entry for JDP2 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for JDP2 Gene

Genomics for JDP2 Gene

Regulatory Elements for JDP2 Gene

Genomic Location for JDP2 Gene

Start:
75,427,716 bp from pter
End:
75,474,111 bp from pter
Size:
46,396 bases
Orientation:
Plus strand

Genomic View for JDP2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for JDP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for JDP2 Gene

Proteins for JDP2 Gene

  • Protein details for JDP2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8WYK2-JDP2_HUMAN
    Recommended name:
    Jun dimerization protein 2
    Protein Accession:
    Q8WYK2
    Secondary Accessions:
    • J3KN58
    • O95430
    • Q9UIE4

    Protein attributes for JDP2 Gene

    Size:
    163 amino acids
    Molecular mass:
    18704 Da
    Quaternary structure:
    • Forms a homodimer or heterodimer with JUN, JUNB, JUND, CEBPG and ATF2 thereby inhibiting transactivation by JUN, ATF2 and CEBPG (By similarity). Binds multiple DNA elements such as cAMP-response element (CRE) and TPA response element (TRE) either as homodimer or heterodimer (By similarity). Interacts with IRF2BP1.

    Alternative splice isoforms for JDP2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for JDP2 Gene

Proteomics data for JDP2 Gene at MOPED

Post-translational modifications for JDP2 Gene

  • Phosphorylation of Thr-148 by MAPK8 in response to different stress conditions such as, UV irradiation, oxidatives stress and anisomycin treatments.
  • Polyubiquitinated; probably by IRF2BP1.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for JDP2 Gene

Domains for JDP2 Gene

Gene Families for JDP2 Gene

HGNC:
  • bZIP :basic leucine zipper proteins

Protein Domains for JDP2 Gene

Suggested Antigen Peptide Sequences for JDP2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8WYK2

UniProtKB/Swiss-Prot:

JDP2_HUMAN :
  • Q8WYK2
Domain:
  • Contains 1 bZIP (basic-leucine zipper) domain.
Family:
  • Belongs to the bZIP family. ATF subfamily.
genes like me logo Genes that share domains with JDP2: view

Function for JDP2 Gene

Molecular function for JDP2 Gene

UniProtKB/Swiss-Prot Function: Component of the AP-1 transcription factor that represses transactivation mediated by the Jun family of proteins. Involved in a variety of transcriptional responses associated with AP-1 such as UV-induced apoptosis, cell differentiation, tumorigenesis and antitumogeneris. Can also function as a repressor by recruiting histone deacetylase 3/HDAC3 to the promoter region of JUN. May control transcription via direct regulation of the modification of histones and the assembly of chromatin.

Gene Ontology (GO) - Molecular Function for JDP2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding --
GO:0003682 chromatin binding IEA --
GO:0003690 double-stranded DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IEA --
GO:0005515 protein binding IPI 18671972
genes like me logo Genes that share ontologies with JDP2: view
genes like me logo Genes that share phenotypes with JDP2: view

Animal Models for JDP2 Gene

MGI Knock Outs for JDP2:

No data available for Enzyme Numbers (IUBMB) , miRNA , Transcription Factor Targeting and HOMER Transcription for JDP2 Gene

Localization for JDP2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for JDP2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for JDP2 Gene COMPARTMENTS Subcellular localization image for JDP2 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for JDP2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005654 nucleoplasm IDA --
genes like me logo Genes that share ontologies with JDP2: view

Pathways for JDP2 Gene

genes like me logo Genes that share pathways with JDP2: view

Pathways by source for JDP2 Gene

1 BioSystems pathway for JDP2 Gene
1 PharmGKB pathway for JDP2 Gene

Gene Ontology (GO) - Biological Process for JDP2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription from RNA polymerase II promoter IEA --
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated --
GO:0031065 positive regulation of histone deacetylation IEA --
GO:0045599 negative regulation of fat cell differentiation IEA --
genes like me logo Genes that share ontologies with JDP2: view

Compounds for JDP2 Gene

(1) HMDB Compounds for JDP2 Gene

Compound Synonyms Cas Number PubMed IDs
Cyclic AMP
  • Cyclic AMP
60-92-4

(3) Novoseek inferred chemical compound relationships for JDP2 Gene

Compound -log(P) Hits PubMed IDs
leucine 50.4 6
12-o-tetradecanoylphorbol 13-acetate 41.2 2
retinoic acid 22.1 2
genes like me logo Genes that share compounds with JDP2: view

Transcripts for JDP2 Gene

Unigene Clusters for JDP2 Gene

Jun dimerization protein 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for JDP2 Gene

No ASD Table

Relevant External Links for JDP2 Gene

GeneLoc Exon Structure for
JDP2
ECgene alternative splicing isoforms for
JDP2

Expression for JDP2 Gene

mRNA expression in normal human tissues for JDP2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for JDP2 Gene

This gene is overexpressed in Whole Blood (4.5).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for JDP2 Gene

SOURCE GeneReport for Unigene cluster for JDP2 Gene Hs.196482

genes like me logo Genes that share expressions with JDP2: view

No data available for mRNA Expression by UniProt/SwissProt for JDP2 Gene

Orthologs for JDP2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for JDP2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia JDP2 35
  • 99.23 (n)
  • 99.43 (a)
JDP2 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia JDP2 35
  • 91 (n)
  • 97.55 (a)
JDP2 36
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia JDP2 35
  • 91.42 (n)
  • 96.49 (a)
JDP2 36
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Jdp2 35
  • 89.98 (n)
  • 96.32 (a)
Jdp2 16
Jdp2 36
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia JDP2 36
  • 93 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia JDP2 36
  • 84 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Jdp2 35
  • 89.37 (n)
  • 96.32 (a)
chicken
(Gallus gallus)
Aves JDP2 35
  • 85.07 (n)
  • 93.25 (a)
JDP2 36
  • 93 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia JDP2 36
  • 76 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii JDP2 36
  • 64 (a)
OneToOne
LOC570258 35
  • 74.12 (n)
  • 78.88 (a)
wufb12f11 35
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 23 (a)
OneToMany
Species with no ortholog for JDP2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for JDP2 Gene

ENSEMBL:
Gene Tree for JDP2 (if available)
TreeFam:
Gene Tree for JDP2 (if available)

Paralogs for JDP2 Gene

Paralogs for JDP2 Gene

Selected SIMAP similar genes for JDP2 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with JDP2: view

Variants for JDP2 Gene

Sequence variations from dbSNP and Humsavar for JDP2 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs3625 - 75,437,957(+) TGACC(A/G)CAGGC reference, missense
rs8215 -- 75,469,814(+) GCCTC(C/T)TCACC utr-variant-3-prime
rs9348 -- 75,469,763(-) GCCTC(A/G)GTGCC utr-variant-3-prime
rs9878 -- 75,469,644(+) CAGCC(A/C/G)CCCAG utr-variant-3-prime
rs10057 -- 75,470,319(-) CACAA(C/T)GGCCG utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for JDP2 Gene

Variant ID Type Subtype PubMed ID
esv22667 CNV Loss 19812545

Relevant External Links for JDP2 Gene

HapMap Linkage Disequilibrium report
JDP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for JDP2 Gene

Disorders for JDP2 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for JDP2 Gene including...

Search for JDP2 Gene in MalaCards »

(1) University of Copenhagen DISEASES for JDP2 Gene

Relevant External Links for JDP2

Genetic Association Database (GAD)
JDP2
Human Genome Epidemiology (HuGE) Navigator
JDP2
genes like me logo Genes that share disorders with JDP2: view

No data available for UniProtKB/Swiss-Prot for JDP2 Gene

Publications for JDP2 Gene

  1. Depletion of the AP-1 repressor JDP2 induces cell death similar to apoptosis. (PMID: 16026868) Lerdrup M. … Kallunki T. (Biochim. Biophys. Acta 2005) 3 4 23
  2. Phosphorylation of two eukaryotic transcription factors, Jun dimerization protein 2 and activation transcription factor 2, in Escherichia coli by Jun N-terminal kinase 1. (PMID: 18307971) Murata T. … Yokoyama K.K. (Anal. Biochem. 2008) 3 4 23
  3. IRF2-binding protein-1 is a JDP2 ubiquitin ligase and an inhibitor of ATF2-dependent transcription. (PMID: 18671972) Kimura M. (FEBS Lett. 2008) 3 4 23
  4. A progesterone receptor co-activator (JDP2) mediates activity through interaction with residues in the carboxyl-terminal extension of the DNA binding domain. (PMID: 19553667) Hill K.K. … Edwards D.P. (J. Biol. Chem. 2009) 3 23
  5. JDP2, a repressor of AP-1, recruits a histone deacetylase 3 complex to inhibit the retinoic acid-induced differentiation of F9 cells. (PMID: 12052888) Jin C. … Yokoyama K.K. (Mol. Cell. Biol. 2002) 2 3

Products for JDP2 Gene

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