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Aliases for AKAP11 Gene

Aliases for AKAP11 Gene

  • A-Kinase Anchoring Protein 11 2 3 5
  • Protein Phosphatase 1, Regulatory Subunit 44 2 3
  • Protein Kinase A Anchoring Protein 11 2 3
  • A-Kinase Anchoring Protein, 220kDa 2 3
  • A Kinase (PRKA) Anchor Protein 11 2 3
  • A-Kinase Anchor Protein 220 KDa 3 4
  • AKAP 220 2 4
  • AKAP-11 3 4
  • AKAP220 3 4
  • PRKA11 3 4
  • Protein Kinase A-Anchoring Protein 11 4
  • A Kinase Anchor Protein 220 KDa 3
  • A-Kinase Anchor Protein 11 3
  • KIAA0629 4
  • HAKAP220 4
  • PPP1R44 3

External Ids for AKAP11 Gene

Previous GeneCards Identifiers for AKAP11 Gene

  • GC13P040846
  • GC13P036832
  • GC13P041782
  • GC13P040644
  • GC13P041744
  • GC13P042846
  • GC13P023649

Summaries for AKAP11 Gene

Entrez Gene Summary for AKAP11 Gene

  • The A-kinase anchor proteins (AKAPs) are a group of structurally diverse proteins, which have the common function of binding to the regulatory subunit of protein kinase A (PKA) and confining the holoenzyme to discrete locations within the cell. This gene encodes a member of the AKAP family. The encoded protein is expressed at high levels throughout spermatogenesis and in mature sperm. It binds the RI and RII subunits of PKA in testis. It may serve a function in cell cycle control of both somatic cells and germ cells in addition to its putative role in spermatogenesis and sperm function. [provided by RefSeq, Jul 2008]

GeneCards Summary for AKAP11 Gene

AKAP11 (A-Kinase Anchoring Protein 11) is a Protein Coding gene. Among its related pathways are Activation of cAMP-Dependent PKA and DAG and IP3 signaling. GO annotations related to this gene include protein kinase A binding and protein phosphatase 1 binding. An important paralog of this gene is SPHKAP.

UniProtKB/Swiss-Prot for AKAP11 Gene

  • Binds to type II regulatory subunits of protein kinase A and anchors/targets them.

Gene Wiki entry for AKAP11 Gene

Additional gene information for AKAP11 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AKAP11 Gene

Genomics for AKAP11 Gene

Regulatory Elements for AKAP11 Gene

Enhancers for AKAP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H042270 1.7 FANTOM5 Ensembl ENCODE 19.5 +2.3 2296 6 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF207 AKAP11 NAA16 TNFSF11 DGKH GC13M042285
GH13H042354 1.5 FANTOM5 Ensembl ENCODE dbSUPER 15.3 +83.9 83906 2 CTCF STAT1 ZBED1 MAX JUNB BATF ZIC2 RAD21 POLR2A EED TNFSF11 AKAP11 DGKH VWA8 FABP3P2 LINC02341
GH13H042279 1 Ensembl ENCODE 15 +7.8 7832 0 LEF1 ZSCAN4 MAX ZFHX2 FOXK2 EGR1 ATF7 RUNX3 IKZF2 CREM AKAP11 GC13M042285
GH13H042333 0.7 ENCODE 16.8 +62.7 62726 0 CTCF CBFB NR2F1 TRIM22 BATF RAD21 NFIC IKZF1 EED ZNF143 AKAP11 GC13M042285 LINC02341
GH13H042391 1.6 FANTOM5 Ensembl ENCODE dbSUPER 6.3 +122.5 122495 4 PKNOX1 ZNF687 L3MBTL2 CBFB USF2 MNT FOSL1 GATA3 POLR2A EED TNFSF11 AKAP11 DGKH GC13M042401 FABP3P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around AKAP11 on UCSC Golden Path with GeneCards custom track

Promoters for AKAP11 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000061902 619 2201 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF207

Genomic Location for AKAP11 Gene

Chromosome:
13
Start:
42,271,481 bp from pter
End:
42,323,267 bp from pter
Size:
51,787 bases
Orientation:
Plus strand

Genomic View for AKAP11 Gene

Genes around AKAP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AKAP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AKAP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AKAP11 Gene

Proteins for AKAP11 Gene

  • Protein details for AKAP11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UKA4-AKA11_HUMAN
    Recommended name:
    A-kinase anchor protein 11
    Protein Accession:
    Q9UKA4
    Secondary Accessions:
    • O75124
    • Q9NUK7

    Protein attributes for AKAP11 Gene

    Size:
    1901 amino acids
    Molecular mass:
    210512 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA92117.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for AKAP11 Gene

Post-translational modifications for AKAP11 Gene

  • Ubiquitination at Lys560
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for AKAP11 Gene

Domains & Families for AKAP11 Gene

Gene Families for AKAP11 Gene

Protein Domains for AKAP11 Gene

Suggested Antigen Peptide Sequences for AKAP11 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9UKA4

UniProtKB/Swiss-Prot:

AKA11_HUMAN :
  • RII-alpha binding site, predicted to form an amphipathic helix, could participate in protein-protein interactions with a complementary surface on the R-subunit dimer.
  • Belongs to the AKAP110 family.
Domain:
  • RII-alpha binding site, predicted to form an amphipathic helix, could participate in protein-protein interactions with a complementary surface on the R-subunit dimer.
Family:
  • Belongs to the AKAP110 family.
genes like me logo Genes that share domains with AKAP11: view

Function for AKAP11 Gene

Molecular function for AKAP11 Gene

GENATLAS Biochemistry:
A kinase (PRKA,regulating subunit RIIA) anchor protein 11,expressed in brain,related to rat A kinase anchoring protein AKAP220
UniProtKB/Swiss-Prot Function:
Binds to type II regulatory subunits of protein kinase A and anchors/targets them.

Phenotypes From GWAS Catalog for AKAP11 Gene

Gene Ontology (GO) - Molecular Function for AKAP11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 27484798
GO:0008157 protein phosphatase 1 binding TAS 10209101
GO:0051018 protein kinase A binding TAS 10209101
genes like me logo Genes that share ontologies with AKAP11: view
genes like me logo Genes that share phenotypes with AKAP11: view

Animal Models for AKAP11 Gene

MGI Knock Outs for AKAP11:

Animal Model Products

CRISPR Products

miRNA for AKAP11 Gene

miRTarBase miRNAs that target AKAP11

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for AKAP11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for AKAP11 Gene

Localization for AKAP11 Gene

Subcellular locations from UniProtKB/Swiss-Prot for AKAP11 Gene

Cytoplasm. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Note=Cytoplasmic in premeiotic pachytene spermatocytes and in the centrosome of developing postmeiotic germ cells, while a midpiece/centrosome localization was found in elongating spermatocytes and mature sperm.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for AKAP11 gene
Compartment Confidence
plasma membrane 5
cytoskeleton 5
nucleus 5
cytosol 5
peroxisome 3
mitochondrion 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (2)
  • Nucleoli (2)
  • Plasma membrane (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for AKAP11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IEA --
GO:0005777 peroxisome IBA --
GO:0005815 microtubule organizing center IEA --
GO:0005829 cytosol IDA --
genes like me logo Genes that share ontologies with AKAP11: view

Pathways & Interactions for AKAP11 Gene

genes like me logo Genes that share pathways with AKAP11: view

Pathways by source for AKAP11 Gene

1 BioSystems pathway for AKAP11 Gene
1 GeneGo (Thomson Reuters) pathway for AKAP11 Gene

Gene Ontology (GO) - Biological Process for AKAP11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0010738 regulation of protein kinase A signaling IBA --
GO:0035556 intracellular signal transduction TAS 10209101
genes like me logo Genes that share ontologies with AKAP11: view

No data available for SIGNOR curated interactions for AKAP11 Gene

Drugs & Compounds for AKAP11 Gene

No Compound Related Data Available

Transcripts for AKAP11 Gene

mRNA/cDNA for AKAP11 Gene

Unigene Clusters for AKAP11 Gene

A kinase (PRKA) anchor protein 11:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for AKAP11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for AKAP11 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b ^ 10 ^ 11a · 11b ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16a · 16b ^ 17 ^ 18a · 18b · 18c
SP1: - -
SP2: -
SP3: - -
SP4: -
SP5:
SP6: - - -
SP7: - -
SP8:
SP9:

Relevant External Links for AKAP11 Gene

GeneLoc Exon Structure for
AKAP11
ECgene alternative splicing isoforms for
AKAP11

Expression for AKAP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AKAP11 Gene

Protein differential expression in normal tissues from HIPED for AKAP11 Gene

This gene is overexpressed in Adrenal (18.1), Testis (15.8), Fetal heart (13.4), and Peripheral blood mononuclear cells (7.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for AKAP11 Gene



Protein tissue co-expression partners for AKAP11 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of AKAP11 Gene:

AKAP11

SOURCE GeneReport for Unigene cluster for AKAP11 Gene:

Hs.105105

mRNA Expression by UniProt/SwissProt for AKAP11 Gene:

Q9UKA4-AKA11_HUMAN
Tissue specificity: Expressed in heart, brain, lung, liver, kidney, testis and ovary. Weakly expressed in skeletal muscle, pancreas and spleen.

Evidence on tissue expression from TISSUES for AKAP11 Gene

  • Nervous system(4.7)
  • Liver(4.2)
genes like me logo Genes that share expression patterns with AKAP11: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for AKAP11 Gene

Orthologs for AKAP11 Gene

This gene was present in the common ancestor of chordates.

Orthologs for AKAP11 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia AKAP11 34 33
  • 99.39 (n)
OneToOne
dog
(Canis familiaris)
Mammalia AKAP11 33 34
  • 86.92 (n)
cow
(Bos Taurus)
Mammalia AKAP11 33 34
  • 84.67 (n)
mouse
(Mus musculus)
Mammalia Akap11 16 34 33
  • 81.43 (n)
rat
(Rattus norvegicus)
Mammalia Akap11 33
  • 81.23 (n)
oppossum
(Monodelphis domestica)
Mammalia AKAP11 34
  • 55 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia AKAP11 34
  • 49 (a)
OneToOne
chicken
(Gallus gallus)
Aves AKAP11 33 34
  • 65.78 (n)
lizard
(Anolis carolinensis)
Reptilia AKAP11 34
  • 42 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia akap11 33
  • 58.47 (n)
Str.612 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.30220 33
zebrafish
(Danio rerio)
Actinopterygii akap11 33 34
  • 55.59 (n)
Species where no ortholog for AKAP11 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for AKAP11 Gene

ENSEMBL:
Gene Tree for AKAP11 (if available)
TreeFam:
Gene Tree for AKAP11 (if available)

Paralogs for AKAP11 Gene

Paralogs for AKAP11 Gene

(1) SIMAP similar genes for AKAP11 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with AKAP11: view

Variants for AKAP11 Gene

Sequence variations from dbSNP and Humsavar for AKAP11 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000093202 -- 42,310,490(+) GTTGC(A/C)TCTGT intron-variant
rs1000225085 -- 42,291,475(+) CTCGA(A/C)CTCCT intron-variant
rs1000289280 -- 42,297,421(+) TATGC(A/C)AGTAC intron-variant
rs1000301739 -- 42,285,304(+) CTCTC(C/G)AGTAG intron-variant
rs1000333971 -- 42,285,105(+) CTGAC(-/GGT)GGGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for AKAP11 Gene

Variant ID Type Subtype PubMed ID
esv3350440 CNV duplication 20981092
nsv1126341 CNV deletion 24896259
nsv832590 CNV gain 17160897
nsv832591 CNV gain 17160897

Variation tolerance for AKAP11 Gene

Residual Variation Intolerance Score: 73.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.92; 74.41% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for AKAP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AKAP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for AKAP11 Gene

Disorders for AKAP11 Gene

Relevant External Links for AKAP11

Genetic Association Database (GAD)
AKAP11
Human Genome Epidemiology (HuGE) Navigator
AKAP11
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
AKAP11

No disorders were found for AKAP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AKAP11 Gene

Publications for AKAP11 Gene

  1. Localization of a novel human A-kinase-anchoring protein, hAKAP220, during spermatogenesis. (PMID: 10864471) Reinton N … Taskén K (Developmental biology 2000) 3 4 22 60
  2. Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PMID: 9734811) Ishikawa K … Ohara O (DNA research : an international journal for rapid publication of reports on genes and genomes 1998) 2 3 4 60
  3. Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies. (PMID: 19801982) Rivadeneira F … Genetic Factors for Osteoporosis (GEFOS) Consortium (Nature genetics 2009) 3 45 60
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 60
  5. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A … Ross MT (Nature 2004) 3 4 60

Products for AKAP11 Gene

Sources for AKAP11 Gene

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