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Aliases for LILRB5 Gene

Aliases for LILRB5 Gene

  • Leukocyte Immunoglobulin-Like Receptor, Subfamily B (With TM And ITIM Domains), Member 5 2 3
  • LIR8 3 4 6
  • Leukocyte Immunoglobulin-Like Receptor 8 3 4
  • CD85 Antigen-Like Family Member C 3 4
  • LIR-8 3 4
  • Leukocyte Immunoglobulin-Like Receptor Subfamily B Member 5 3
  • CD85c Antigen 4
  • CD85C 3

External Ids for LILRB5 Gene

Previous GeneCards Identifiers for LILRB5 Gene

  • GC19M055617
  • GC19M055178
  • GC19M059430
  • GC19M059446
  • GC19M054754
  • GC19M051081

Summaries for LILRB5 Gene

Entrez Gene Summary for LILRB5 Gene

  • This gene is a member of the leukocyte immunoglobulin-like receptor (LIR) family, which is found in a gene cluster at chromosomal region 19q13.4. The encoded protein belongs to the subfamily B class of LIR receptors which contain two or four extracellular immunoglobulin domains, a transmembrane domain, and two to four cytoplasmic immunoreceptor tyrosine-based inhibitory motifs (ITIMs). Several other LIR subfamily B receptors are expressed on immune cells where they bind to MHC class I molecules on antigen-presenting cells and inhibit stimulation of an immune response. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

GeneCards Summary for LILRB5 Gene

LILRB5 (Leukocyte Immunoglobulin-Like Receptor, Subfamily B (With TM And ITIM Domains), Member 5) is a Protein Coding gene. Among its related pathways are Class I MHC mediated antigen processing and presentation and Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell. GO annotations related to this gene include transmembrane signaling receptor activity. An important paralog of this gene is KIR2DL4.

UniProtKB/Swiss-Prot for LILRB5 Gene

  • May act as receptor for class I MHC antigens

Gene Wiki entry for LILRB5 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LILRB5 Gene

Genomics for LILRB5 Gene

Regulatory Elements for LILRB5 Gene

Genomic Location for LILRB5 Gene

Start:
54,249,431 bp from pter
End:
54,257,304 bp from pter
Size:
7,874 bases
Orientation:
Minus strand

Genomic View for LILRB5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LILRB5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LILRB5 Gene

Proteins for LILRB5 Gene

  • Protein details for LILRB5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O75023-LIRB5_HUMAN
    Recommended name:
    Leukocyte immunoglobulin-like receptor subfamily B member 5
    Protein Accession:
    O75023
    Secondary Accessions:
    • Q8N760

    Protein attributes for LILRB5 Gene

    Size:
    590 amino acids
    Molecular mass:
    64126 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for LILRB5 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for LILRB5 Gene

Proteomics data for LILRB5 Gene at MOPED

Post-translational modifications for LILRB5 Gene

  • Glycosylation at Asn139, Asn279, and Asn339
  • Modification sites at PhosphoSitePlus

Other Protein References for LILRB5 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for LILRB5 Gene

Domains for LILRB5 Gene

Gene Families for LILRB5 Gene

HGNC:
  • CD :CD molecules
  • IGD :Immunoglobulin superfamily / Immunoglobulin-like domain containing
  • LILR :Leukocyte immunoglobulin-like receptors

Protein Domains for LILRB5 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for LILRB5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

O75023

UniProtKB/Swiss-Prot:

LIRB5_HUMAN :
  • O75023
Domain:
  • Contains 2 copies of a cytoplasmic motif that is referred to as the immunoreceptor tyrosine-based inhibitor motif (ITIM). This motif is involved in modulation of cellular responses. The phosphorylated ITIM motif can bind the SH2 domain of several SH2-containing phosphatases
  • Contains 4 Ig-like C2-type (immunoglobulin-like) domains.
genes like me logo Genes that share domains with LILRB5: view

Function for LILRB5 Gene

Molecular function for LILRB5 Gene

GENATLAS Biochemistry: leukocyte immunoglobulin-like receptor,subfamily B,member 5,expressed restrictively on natural killer cells,related to the Fc alpha receptor and natural killed inhibitory receptor superfamily
UniProtKB/Swiss-Prot Function: May act as receptor for class I MHC antigens

Gene Ontology (GO) - Molecular Function for LILRB5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004888 transmembrane signaling receptor activity TAS 9548455
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with LILRB5: view

miRNA for LILRB5 Gene

miRTarBase miRNAs that target LILRB5

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for LILRB5 Gene

Localization for LILRB5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for LILRB5 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for LILRB5 Gene COMPARTMENTS Subcellular localization image for LILRB5 gene
Compartment Confidence
plasma membrane 3
cytosol 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for LILRB5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with LILRB5: view

Pathways for LILRB5 Gene

genes like me logo Genes that share pathways with LILRB5: view

Pathways by source for LILRB5 Gene

Interacting Proteins for LILRB5 Gene

Selected Interacting proteins: O75023-LIRB5_HUMAN for LILRB5 Gene via I2D

Symbol External ID(s) Details
CREB3

Gene Ontology (GO) - Biological Process for LILRB5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002376 immune system process IEA --
GO:0006952 defense response TAS 9548455
GO:0007166 cell surface receptor signaling pathway TAS 9548455
genes like me logo Genes that share ontologies with LILRB5: view

Transcripts for LILRB5 Gene

mRNA/cDNA for LILRB5 Gene

Unigene Clusters for LILRB5 Gene

Leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LILRB5 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15
SP1:
SP2:
SP3:
SP4: - - -
SP5: -
SP6: - -
SP7:
SP8: -

Relevant External Links for LILRB5 Gene

GeneLoc Exon Structure for
LILRB5
ECgene alternative splicing isoforms for
LILRB5

Expression for LILRB5 Gene

mRNA expression in normal human tissues for LILRB5 Gene

mRNA differential expression in normal tissues according to GTEx for LILRB5 Gene

This gene is overexpressed in Spleen (12.4), Adipose - Visceral (Omentum) (4.9), and Adipose - Subcutaneous (4.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for LILRB5 Gene

SOURCE GeneReport for Unigene cluster for LILRB5 Gene Hs.655338

mRNA Expression by UniProt/SwissProt for LILRB5 Gene

O75023-LIRB5_HUMAN
Tissue specificity: Detected in a natural killer (NK) cells.
genes like me logo Genes that share expressions with LILRB5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for LILRB5 Gene

Orthologs for LILRB5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for LILRB5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LILRB5 35
  • 95.76 (n)
  • 93.05 (a)
LILRB5 36
  • 88 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 53 (a)
ManyToMany
-- 36
  • 38 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
-- 36
  • 50 (a)
ManyToMany
-- 36
  • 63 (a)
ManyToMany
-- 36
  • 45 (a)
ManyToMany
-- 36
  • 46 (a)
ManyToMany
-- 36
  • 40 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 56 (a)
ManyToMany
LILRA4 36
  • 55 (a)
ManyToMany
LOC510520 35
  • 74.35 (n)
  • 62.47 (a)
dog
(Canis familiaris)
Mammalia -- 36
  • 49 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm15448 16
Lilra5 36
  • 44 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 18 (a)
OneToMany
Species with no ortholog for LILRB5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for LILRB5 Gene

ENSEMBL:
Gene Tree for LILRB5 (if available)
TreeFam:
Gene Tree for LILRB5 (if available)

Paralogs for LILRB5 Gene

genes like me logo Genes that share paralogs with LILRB5: view

Variants for LILRB5 Gene

Sequence variations from dbSNP and Humsavar for LILRB5 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs72087 -- 54,252,279(-) CTGGG(A/G)GGGGT intron-variant
rs380731 -- 54,255,708(-) AGGAG(A/G)CCCCG intron-variant
rs392289 -- 54,259,231(-) tctcg(C/T)ctcac upstream-variant-2KB
rs393600 -- 54,255,239(-) ACAGG(C/T)CCTGC intron-variant
rs393665 -- 54,251,997(-) AATCC(A/T)GCAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LILRB5 Gene

Variant ID Type Subtype PubMed ID
esv2718812 CNV Deletion 23290073
nsv510774 CNV Loss 20534489
dgv1118e1 CNV Complex 17122850
nsv428371 CNV Gain+Loss 18775914
dgv1119e1 CNV Complex 17122850
nsv2546 CNV Loss 18451855
dgv1120e1 CNV Complex 17122850
dgv1121e1 CNV Complex 17122850
nsv912399 CNV Loss 21882294
nsv183 CNV Loss 15895083
dgv4003n71 CNV Loss 21882294
nsv912402 CNV Gain 21882294
esv1003658 CNV Gain 20482838
dgv1124e1 CNV Complex 17122850
dgv1125e1 CNV Complex 17122850
esv2718860 CNV Deletion 23290073
dgv434n27 CNV Gain 19166990
nsv817870 CNV Gain 17921354
dgv4004n71 CNV Loss 21882294
nsv2548 CNV Insertion 18451855
nsv528370 CNV Loss 19592680
nsv435704 CNV Deletion 17901297
esv2718863 CNV Deletion 23290073

Relevant External Links for LILRB5 Gene

HapMap Linkage Disequilibrium report
LILRB5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for LILRB5 Gene

Disorders for LILRB5 Gene

Relevant External Links for LILRB5

Human Genome Epidemiology (HuGE) Navigator
LILRB5
genes like me logo Genes that share disorders with LILRB5: view

No data available for UniProtKB/Swiss-Prot for LILRB5 Gene

Publications for LILRB5 Gene

  1. A family of human lymphoid and myeloid Ig-like receptors, some of which bind to MHC class I molecules. (PMID: 9548455) Borges L. … Cosman D. (J. Immunol. 1997) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. (PMID: 16335952) Liu T. … Smith R.D. (J. Proteome Res. 2005) 3 4
  5. Differential expression of leukocyte immunoglobulin-like receptors on cord-blood-derived human mast cell progenitors and mature mast cells. (PMID: 17998301) Tedla N. … Arm J.P. (J. Leukoc. Biol. 2008) 3

Products for LILRB5 Gene

Sources for LILRB5 Gene

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