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Aliases for MAGED2 Gene

Aliases for MAGED2 Gene

  • MAGE Family Member D2 2 3 5
  • Hepatocellular Carcinoma-Associated Protein JCL-1 3 4
  • Breast Cancer-Associated Gene 1 Protein 3 4
  • Melanoma Antigen Family D2 2 3
  • MAGE-D2 Antigen 3 4
  • BCG-1 3 4
  • 11B6 3 4
  • BCG1 3 4
  • Hepatocellular Carcinoma-Associated Protein HCA10 2
  • Hepatocellular Carcinoma Associated Protein 2
  • Breast Cancer Associated Gene 1 2
  • Melanoma-Associated Antigen D2 2
  • Melanoma Antigen Family D, 2 3
  • MAGE-D2 3
  • HCA10 3

External Ids for MAGED2 Gene

Previous GeneCards Identifiers for MAGED2 Gene

  • GC0XP051686
  • GC0XP052772
  • GC0XP053439
  • GC0XP053800
  • GC0XP054717
  • GC0XP054850
  • GC0XP051883
  • GC0XP054834

Summaries for MAGED2 Gene

Entrez Gene Summary for MAGED2 Gene

  • This gene is a member of the MAGED gene family. The MAGED genes are clustered on chromosome Xp11. This gene is located in Xp11.2, a hot spot for X-linked mental retardation (XLMR). This gene may also be involved in several types of cancer, including breast cancer and melanoma. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]

GeneCards Summary for MAGED2 Gene

MAGED2 (MAGE Family Member D2) is a Protein Coding gene. Diseases associated with MAGED2 include melanoma and breast cancer. An important paralog of this gene is MAGEC3.

Gene Wiki entry for MAGED2 Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MAGED2 Gene

Genomics for MAGED2 Gene

Regulatory Elements for MAGED2 Gene

Promoters for MAGED2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MAGED2 on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the MAGED2 gene promoter:

Genomic Location for MAGED2 Gene

Chromosome:
X
Start:
54,807,599 bp from pter
End:
54,816,015 bp from pter
Size:
8,417 bases
Orientation:
Plus strand

Genomic View for MAGED2 Gene

Genes around MAGED2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MAGED2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MAGED2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MAGED2 Gene

Proteins for MAGED2 Gene

  • Protein details for MAGED2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UNF1-MAGD2_HUMAN
    Recommended name:
    Melanoma-associated antigen D2
    Protein Accession:
    Q9UNF1
    Secondary Accessions:
    • A6NMX0
    • O76058
    • Q5BJF3
    • Q8NAL6
    • Q9H218
    • Q9P0U9
    • Q9UM52

    Protein attributes for MAGED2 Gene

    Size:
    606 amino acids
    Molecular mass:
    64954 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for MAGED2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MAGED2 Gene

Proteomics data for MAGED2 Gene at MOPED

Post-translational modifications for MAGED2 Gene

  • Ubiquitination at Lys 207, Lys 288, Lys 330, Lys 397, Lys 469, Lys 484, Lys 494, and Lys 528
  • Glycosylation at Ser 52
  • Modification sites at PhosphoSitePlus

Antibody Products

No data available for DME Specific Peptides for MAGED2 Gene

Domains & Families for MAGED2 Gene

Gene Families for MAGED2 Gene

Protein Domains for MAGED2 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for MAGED2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9UNF1

UniProtKB/Swiss-Prot:

MAGD2_HUMAN :
  • Contains 1 MAGE domain.
Domain:
  • Contains 1 MAGE domain.
genes like me logo Genes that share domains with MAGED2: view

Function for MAGED2 Gene

genes like me logo Genes that share phenotypes with MAGED2: view

Animal Model Products

miRNA for MAGED2 Gene

miRTarBase miRNAs that target MAGED2

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MAGED2 Gene

Localization for MAGED2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MAGED2 Gene COMPARTMENTS Subcellular localization image for MAGED2 gene
Compartment Confidence
cytosol 4
nucleus 4

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for MAGED2 Gene

Pathways & Interactions for MAGED2 Gene

SuperPathways for MAGED2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MAGED2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MAGED2 Gene

Drugs & Compounds for MAGED2 Gene

No Compound Related Data Available

Transcripts for MAGED2 Gene

Unigene Clusters for MAGED2 Gene

Melanoma antigen family D, 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MAGED2 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b · 6c ^ 7a · 7b · 7c · 7d · 7e ^ 8a · 8b · 8c · 8d ^ 9 ^ 10 ^ 11a · 11b ^ 12a · 12b ^
SP1: - - - - - - -
SP2: - - - - -
SP3: - -
SP4: -
SP5: - - - - - - - - - -
SP6: -
SP7: - - - - - - -
SP8: - - - -
SP9: - - - - - - - - - - - -
SP10: - - - -
SP11:
SP12: - - -
SP13:
SP14:
SP15:

ExUns: 13 ^ 14a · 14b · 14c ^ 15 ^ 16 ^ 17 ^ 18a · 18b
SP1: - -
SP2: - -
SP3: - -
SP4: - -
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:

Relevant External Links for MAGED2 Gene

GeneLoc Exon Structure for
MAGED2
ECgene alternative splicing isoforms for
MAGED2

Expression for MAGED2 Gene

mRNA expression in normal human tissues for MAGED2 Gene

Protein differential expression in normal tissues from HIPED for MAGED2 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (14.5), Nasal epithelium (10.4), and Bone (9.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for MAGED2 Gene



SOURCE GeneReport for Unigene cluster for MAGED2 Gene Hs.522665

mRNA Expression by UniProt/SwissProt for MAGED2 Gene

Q9UNF1-MAGD2_HUMAN
Tissue specificity: Widely expressed in normal tissues.
genes like me logo Genes that share expression patterns with MAGED2: view

Protein tissue co-expression partners for MAGED2 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA differential expression in normal tissues for MAGED2 Gene

Orthologs for MAGED2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for MAGED2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MAGED2 36
  • 100 (a)
OneToOne
MAGED2 35
  • 99.61 (n)
  • 99.5 (a)
cow
(Bos Taurus)
Mammalia MAGED2 35
  • 90.93 (n)
  • 89.8 (a)
MAGED2 36
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MAGED2 36
  • 83 (a)
OneToOne
MAGED2 35
  • 90.84 (n)
  • 89.78 (a)
mouse
(Mus musculus)
Mammalia Maged2 16
Maged2 36
  • 86 (a)
OneToOne
Maged2 35
  • 88.23 (n)
  • 87.46 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 45 (a)
ManyToMany
-- 36
  • 36 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 42 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Maged2 35
  • 88.23 (n)
  • 87.62 (a)
chicken
(Gallus gallus)
Aves MAGE 36
  • 43 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 41 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii ndnl2 36
  • 40 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 39 (a)
OneToMany
Species with no ortholog for MAGED2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MAGED2 Gene

ENSEMBL:
Gene Tree for MAGED2 (if available)
TreeFam:
Gene Tree for MAGED2 (if available)

Paralogs for MAGED2 Gene

genes like me logo Genes that share paralogs with MAGED2: view

Variants for MAGED2 Gene

Sequence variations from dbSNP and Humsavar for MAGED2 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
VAR_011639 -
VAR_036584 A breast cancer sample
rs12014977 - 54,810,844(+) GAAGA(C/G)GATGG reference, missense
rs2071932 -- 54,811,644(+) TATTC(C/T)TTGGA reference, synonymous-codon
rs2071933 -- 54,811,919(+) GATTT(A/C)ACCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MAGED2 Gene

Variant ID Type Subtype PubMed ID
nsv435891 CNV Deletion 17901297
esv2740175 CNV Deletion 23290073

Variation tolerance for MAGED2 Gene

Residual Variation Intolerance Score: 56.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.53; 44.20% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MAGED2 Gene

HapMap Linkage Disequilibrium report
MAGED2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MAGED2 Gene

Disorders for MAGED2 Gene

MalaCards: The human disease database

(2) MalaCards diseases for MAGED2 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
melanoma
  • malignant melanoma
breast cancer
  • breast cancer, invasive ductal
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for MAGED2

Genetic Association Database (GAD)
MAGED2
Human Genome Epidemiology (HuGE) Navigator
MAGED2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MAGED2
genes like me logo Genes that share disorders with MAGED2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MAGED2 Gene

Publications for MAGED2 Gene

  1. Use of expression data and the CGEMS genome-wide breast cancer association study to identify genes that may modify risk in BRCA1/2 mutation carriers. (PMID: 18095154) Walker L.C. … Spurdle A.B. (Breast Cancer Res. Treat. 2008) 3 48 67
  2. Comparative expression analysis of the MAGED genes during embryogenesis and brain development. (PMID: 15162511) Bertrand M. … De Backer O. (Dev. Dyn. 2004) 3 23
  3. Identification of a novel MAGE D2 antisense RNA transcript in human tissues. (PMID: 15465002) Harper R. … Wu R. (Biochem. Biophys. Res. Commun. 2004) 3 23
  4. Integrative analysis of kinase networks in TRAIL-induced apoptosis provides a source of potential targets for combination therapy. (PMID: 25852190) So J. … Colwill K. (Sci Signal 2015) 3
  5. Temporal proteomics of NGF-TrkA signaling identifies an inhibitory role for the E3 ligase Cbl-b in neuroblastoma cell differentiation. (PMID: 25921289) Emdal K.B. … Olsen J.V. (Sci Signal 2015) 3

Products for MAGED2 Gene

Sources for MAGED2 Gene

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