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Aliases for EGOT Gene

Subcategory (RNA class) for EGOT Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for EGOT Gene

  • Eosinophil Granule Ontogeny Transcript (Non-Protein Coding) 2 3
  • EGO 3 6
  • Eosinophil Granule Ontogeny 2
  • Non-Protein Coding RNA 190 2
  • NCRNA00190 3

External Ids for EGOT Gene

Summaries for EGOT Gene

GeneCards Summary for EGOT Gene

EGOT (Eosinophil Granule Ontogeny Transcript (Non-Protein Coding)) is an RNA Gene, and belongs to the lncRNA class. Diseases associated with EGOT include fetishism.

Gene Wiki entry for EGOT Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EGOT Gene

Genomics for EGOT Gene

Genomic Location for EGOT Gene

Start:
4,749,192 bp from pter
End:
4,751,590 bp from pter
Size:
2,399 bases
Orientation:
Minus strand

Genomic View for EGOT Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for EGOT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EGOT Gene

No data available for Regulatory Elements for EGOT Gene

Proteins for EGOT Gene

Post-translational modifications for EGOT Gene

No Post-translational modifications

No data available for DME Specific Peptides for EGOT Gene

Domains for EGOT Gene

Gene Families for EGOT Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with EGOT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EGOT Gene

Function for EGOT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for EGOT Gene

Localization for EGOT Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for EGOT Gene COMPARTMENTS Subcellular localization image for EGOT gene
Compartment Confidence
extracellular 3
cytosol 2
nucleus 2
endosome 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for EGOT Gene

Pathways for EGOT Gene

SuperPathways for EGOT Gene

No Data Available

Interacting Proteins for EGOT Gene

Gene Ontology (GO) - Biological Process for EGOT Gene

None

No data available for Pathways by source for EGOT Gene

Transcripts for EGOT Gene

mRNA/cDNA for EGOT Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for EGOT Gene

Eosinophil granule ontogeny transcript (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for EGOT Gene

No ASD Table

Relevant External Links for EGOT Gene

GeneLoc Exon Structure for
EGOT
ECgene alternative splicing isoforms for
EGOT

Expression for EGOT Gene

mRNA expression in normal human tissues for EGOT Gene

mRNA differential expression in normal tissues according to GTEx for EGOT Gene

This gene is overexpressed in Kidney - Cortex (14.3), Pancreas (4.6), and Breast - Mammary Tissue (4.2).

SOURCE GeneReport for Unigene cluster for EGOT Gene Hs.663059

genes like me logo Genes that share expressions with EGOT: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for EGOT Gene

Orthologs for EGOT Gene

Evolution for EGOT Gene

ENSEMBL:
Gene Tree for EGOT (if available)
TreeFam:
Gene Tree for EGOT (if available)

No data available for Orthologs for EGOT Gene

Paralogs for EGOT Gene

No data available for Paralogs for EGOT Gene

Variants for EGOT Gene

Structural Variations from Database of Genomic Variants (DGV) for EGOT Gene

Variant ID Type Subtype PubMed ID
nsv460357 CNV Loss 19166990

Relevant External Links for EGOT Gene

HapMap Linkage Disequilibrium report
EGOT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for EGOT Gene

Disorders for EGOT Gene

(1) MalaCards Diseases for EGOT Gene

Search for EGOT Gene in MalaCards »

(2) University of Copenhagen DISEASES for EGOT Gene

Relevant External Links for EGOT

Genetic Association Database (GAD)
EGOT
genes like me logo Genes that share disorders with EGOT: view

No data available for UniProtKB/Swiss-Prot for EGOT Gene

Publications for EGOT Gene

  1. EGO, a novel, noncoding RNA gene, regulates eosinophil granule protein transcript expression. (PMID: 17351112) Wagner L.A. … Gleich G.J. (Blood 2007) 2 3
  2. Molecular evolution of the non-coding eosinophil granule ontogeny transcript. (PMID: 22303364) Rose D. … Stadler P.F. (Front Genet 2011) 2 3
  3. Large-scale genotyping identifies 41 new loci associated with breast cancer risk. (PMID: 23535729) Michailidou K. … Easton D.F. (Nat. Genet. 2013) 3
  4. A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries. (PMID: 21979947) Li X. … Rabinowitz Y.S. (Hum. Mol. Genet. 2012) 48

Products for EGOT Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate EGOT
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for EGOT
    • Block miRNA regulation of EGOT using miScript Target Protectors

    Sources for EGOT Gene

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