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Aliases for ZBTB33 Gene

Aliases for ZBTB33 Gene

  • Zinc Finger And BTB Domain Containing 33 2 3
  • Zinc Finger And BTB Domain-Containing Protein 33 3 4
  • ZNF348 3 4
  • KAISO 4 6
  • Transcriptional Regulator Kaiso 3
  • Kaiso Transcription Factor 3
  • WUGSC:H_DJ525N14.1 3
  • ZNF-Kaiso 3

External Ids for ZBTB33 Gene

Summaries for ZBTB33 Gene

Entrez Gene Summary for ZBTB33 Gene

  • This gene encodes a transcriptional regulator with bimodal DNA-binding specificity, which binds to methylated CGCG and also to the non-methylated consensus KAISO-binding site TCCTGCNA. The protein contains an N-terminal POZ/BTB domain and 3 C-terminal zinc finger motifs. It recruits the N-CoR repressor complex to promote histone deacetylation and the formation of repressive chromatin structures in target gene promoters. It may contribute to the repression of target genes of the Wnt signaling pathway, and may also activate transcription of a subset of target genes by the recruitment of catenin delta-2 (CTNND2). Its interaction with catenin delta-1 (CTNND1) inhibits binding to both methylated and non-methylated DNA. It also interacts directly with the nuclear import receptor Importin-α2 (also known as karyopherin alpha2 or RAG cohort 1), which may mediate nuclear import of this protein. Alternatively spliced transcript variants encoding the same protein have been identified.[provided by RefSeq, May 2010]

GeneCards Summary for ZBTB33 Gene

ZBTB33 (Zinc Finger And BTB Domain Containing 33) is a Protein Coding gene. Among its related pathways are Wnt Signaling Pathway (WikiPathways). An important paralog of this gene is ZBTB7B.

UniProtKB/Swiss-Prot for ZBTB33 Gene

  • Transcriptional regulator with bimodal DNA-binding specificity. Binds to methylated CpG dinucleotides in the consensus sequence 5-CGCG-3 and also binds to the non-methylated consensus sequence 5-CTGCNA-3. Recruits the N-CoR repressor complex to promote histone deacetylation and the formation of repressive chromatin structures in target gene promoters. May contribute to the repression of target genes of the Wnt signaling pathway. May also activate transcription of a subset of target genes by the recruitment of CTNND2.

Gene Wiki entry for ZBTB33 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBTB33 Gene

Genomics for ZBTB33 Gene

Genomic Location for ZBTB33 Gene

Start:
120,250,752 bp from pter
End:
120,258,398 bp from pter
Size:
7,647 bases
Orientation:
Plus strand

Genomic View for ZBTB33 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZBTB33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBTB33 Gene

Regulatory Elements for ZBTB33 Gene

Proteins for ZBTB33 Gene

  • Protein details for ZBTB33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86T24-KAISO_HUMAN
    Recommended name:
    Transcriptional regulator Kaiso
    Protein Accession:
    Q86T24
    Secondary Accessions:
    • B2R5U6
    • O00319
    • Q7Z361
    • Q8IVP6
    • Q8N3P0

    Protein attributes for ZBTB33 Gene

    Size:
    672 amino acids
    Molecular mass:
    74484 Da
    Quaternary structure:
    • Self-associates. Interacts with CTNND2 (By similarity). Interacts with CTNND1, and this interaction inhibits binding to both methylated and non-methylated DNA. Interacts with NCOR1. Interacts with KPNA2/RCH1, which may mediate nuclear import of this protein.

    Three dimensional structures from OCA and Proteopedia for ZBTB33 Gene

neXtProt entry for ZBTB33 Gene

Proteomics data for ZBTB33 Gene at MOPED

Post-translational modifications for ZBTB33 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys407, Lys529, and Lys582

Other Protein References for ZBTB33 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZBTB33 Gene

Domains for ZBTB33 Gene

Gene Families for ZBTB33 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type
  • BTBD :BTB/POZ domain containing

Protein Domains for ZBTB33 Gene

UniProtKB/Swiss-Prot:

KAISO_HUMAN
Domain:
  • Contains 1 BTB (POZ) domain.:
    • Q86T24
Similarity:
  • Contains 3 C2H2-type zinc fingers.:
    • Q86T24
genes like me logo Genes that share domains with ZBTB33: view

Function for ZBTB33 Gene

Molecular function for ZBTB33 Gene

UniProtKB/Swiss-Prot Function: Transcriptional regulator with bimodal DNA-binding specificity. Binds to methylated CpG dinucleotides in the consensus sequence 5-CGCG-3 and also binds to the non-methylated consensus sequence 5-CTGCNA-3. Recruits the N-CoR repressor complex to promote histone deacetylation and the formation of repressive chromatin structures in target gene promoters. May contribute to the repression of target genes of the Wnt signaling pathway. May also activate transcription of a subset of target genes by the recruitment of CTNND2.
UniProtKB/Swiss-Prot Induction: Induced in vascular endothelium by wounding. This effect is potentiated by prior laminar shear stress, which enhances wound closure.

Gene Ontology (GO) - Molecular Function for ZBTB33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 16354688
GO:0008327 methyl-CpG binding IDA 16354688
GO:0043565 sequence-specific DNA binding IDA 20403812
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZBTB33: view

Phenotypes for ZBTB33 Gene

genes like me logo Genes that share phenotypes with ZBTB33: view

Animal Models for ZBTB33 Gene

MGI Knock Outs for ZBTB33:

miRNA for ZBTB33 Gene

Targeting motifs for ZBTB33 Gene
HOMER Transcription Factor Regulatory Elements motif ZBTB33
  • Consensus sequence: GGNTCTCGCGAGAAC Submotif: canonical Cell Type: GM12878 GeoId: GSE32465

No data available for Enzyme Numbers (IUBMB) and Transcription Factor Targeting for ZBTB33 Gene

Localization for ZBTB33 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZBTB33 Gene

Nucleus. Cytoplasm. Note=Also cytoplasmic in cells grown at high densities.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZBTB33 Gene COMPARTMENTS Subcellular localization image for ZBTB33 gene
Compartment Confidence
nucleus 5
cytosol 4
plasma membrane 4

Gene Ontology (GO) - Cellular Components for ZBTB33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005654 nucleoplasm IDA --
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IDA --
GO:0005886 plasma membrane IDA --
genes like me logo Genes that share ontologies with ZBTB33: view

Pathways for ZBTB33 Gene

genes like me logo Genes that share pathways with ZBTB33: view

Pathways by source for ZBTB33 Gene

1 BioSystems pathway for ZBTB33 Gene

Gene Ontology (GO) - Biological Process for ZBTB33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0016055 Wnt signaling pathway IEA --
GO:0035556 intracellular signal transduction TAS 10207085
GO:0045892 negative regulation of transcription, DNA-templated IDA 16354688
genes like me logo Genes that share ontologies with ZBTB33: view

Transcripts for ZBTB33 Gene

mRNA/cDNA for ZBTB33 Gene

Unigene Clusters for ZBTB33 Gene

Zinc finger and BTB domain containing 33:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB33 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b
SP1:
SP2: -

Relevant External Links for ZBTB33 Gene

GeneLoc Exon Structure for
ZBTB33
ECgene alternative splicing isoforms for
ZBTB33

Expression for ZBTB33 Gene

mRNA expression in normal human tissues for ZBTB33 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZBTB33 Gene

SOURCE GeneReport for Unigene cluster for ZBTB33 Gene Hs.143604

mRNA Expression by UniProt/SwissProt for ZBTB33 Gene

Q86T24-KAISO_HUMAN
Tissue specificity: Expressed in vascular endothelium.
genes like me logo Genes that share expressions with ZBTB33: view

Orthologs for ZBTB33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZBTB33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZBTB33 36
  • 99.85 (n)
  • 99.85 (a)
ZBTB33 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MGC155143 37
  • 94 (a)
OneToOne
ZBTB33 36
  • 92.48 (n)
  • 93.53 (a)
dog
(Canis familiaris)
Mammalia ZBTB33 36
  • 92.56 (n)
  • 93.3 (a)
ZBTB33 37
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zbtb33 36
  • 88.29 (n)
  • 87 (a)
Zbtb33 16
Zbtb33 37
  • 88 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZBTB33 37
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ZBTB33 37
  • 81 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zbtb33 36
  • 87.03 (n)
  • 86.38 (a)
chicken
(Gallus gallus)
Aves ZBTB33 36
  • 66.97 (n)
  • 64.11 (a)
ZBTB33 37
  • 63 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ZBTB33 37
  • 56 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Kaiso 36
tropical clawed frog
(Silurana tropicalis)
Amphibia zbtb33 36
  • 63.44 (n)
  • 58.91 (a)
zebrafish
(Danio rerio)
Actinopterygii zbtb33 36
  • 59.72 (n)
  • 57.4 (a)
zbtb33 37
  • 45 (a)
OneToOne
Species with no ortholog for ZBTB33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZBTB33 Gene

ENSEMBL:
Gene Tree for ZBTB33 (if available)
TreeFam:
Gene Tree for ZBTB33 (if available)

Paralogs for ZBTB33 Gene

Paralogs for ZBTB33 Gene

genes like me logo Genes that share paralogs with ZBTB33: view

Variants for ZBTB33 Gene

Sequence variations from dbSNP and Humsavar for ZBTB33 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs1044413 -- 120,258,025(+) CTTGC(A/G)AGACT utr-variant-3-prime
rs2285406 -- 120,254,462(+) TCGGC(C/T)GTCAG reference, synonymous-codon
rs5910810 -- 120,256,810(+) AAAGG(A/T)AAAAA utr-variant-3-prime
rs7051496 -- 120,251,324(+) ATTTA(A/G)AGCTT intron-variant
rs7882480 -- 120,256,111(+) ACCTT(C/T)GCAGT utr-variant-3-prime

Relevant External Links for ZBTB33 Gene

HapMap Linkage Disequilibrium report
ZBTB33
Human Gene Mutation Database (HGMD)
ZBTB33
Locus Specific Mutation Databases (LSDB)
ZBTB33

No data available for Structural Variations from Database of Genomic Variants (DGV) for ZBTB33 Gene

Disorders for ZBTB33 Gene

No disorders were found for ZBTB33 Gene.

No data available for UniProtKB/Swiss-Prot for ZBTB33 Gene

Publications for ZBTB33 Gene

  1. Nuclear import of the BTB/POZ transcriptional regulator Kaiso. (PMID: 15564377) Kelly K.F. … Daniel J.M. (J. Cell Sci. 2004) 3 4 23
  2. The p120 catenin partner Kaiso is a DNA methylation-dependent transcriptional repressor. (PMID: 11445535) Prokhortchouk A. … Prokhortchouk E. (Genes Dev. 2001) 3 4 23
  3. Non-canonical Wnt signals are modulated by the Kaiso transcriptional repressor and p120-catenin. (PMID: 15543138) Kim S.W. … McCrea P.D. (Nat. Cell Biol. 2004) 3 23
  4. Kaiso is a genome-wide repressor of transcription that is essential for amphibian development. (PMID: 15548582) Ruzov A. … Meehan R.R. (Development 2004) 3 4
  5. The human enhancer blocker CTC-binding factor interacts with the transcription factor Kaiso. (PMID: 16230345) Defossez P.A. … Gilson E. (J. Biol. Chem. 2005) 3 23

Products for ZBTB33 Gene

Sources for ZBTB33 Gene

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