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Aliases for ZSCAN31 Gene

Aliases for ZSCAN31 Gene

  • Zinc Finger And SCAN Domain Containing 31 2 3
  • Zinc Finger Protein 323 2 3 4
  • ZNF323 3 4 6
  • Zinc Finger Protein 310 Pseudogene 2 3
  • ZNF310P 3 4
  • Zinc Finger And SCAN Domain-Containing Protein 31 3
  • DJ874C20.2 3
  • ZNF20-Lp 3

External Ids for ZSCAN31 Gene

Previous HGNC Symbols for ZSCAN31 Gene

  • ZNF310P
  • ZNF323

Previous GeneCards Identifiers for ZSCAN31 Gene

  • GC06M028296

Summaries for ZSCAN31 Gene

Entrez Gene Summary for ZSCAN31 Gene

  • ZNF323 is a member of the subfamily of C2H2 Kruppel-like zinc finger transcription factors that have a SCAN box domain (Pi et al., 2002 [PubMed 12147252]).[supplied by OMIM, Mar 2008]

GeneCards Summary for ZSCAN31 Gene

ZSCAN31 (Zinc Finger And SCAN Domain Containing 31) is a Protein Coding gene. GO annotations related to this gene include sequence-specific DNA binding transcription factor activity. An important paralog of this gene is ZNF396.

UniProtKB/Swiss-Prot for ZSCAN31 Gene

  • May function as a transcription factor. May be involved in the development of multiple embryonic organs

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZSCAN31 Gene

Genomics for ZSCAN31 Gene

Genomic Location for ZSCAN31 Gene

Start:
28,324,693 bp from pter
End:
28,356,271 bp from pter
Size:
31,579 bases
Orientation:
Minus strand

Genomic View for ZSCAN31 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZSCAN31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZSCAN31 Gene

No data available for Regulatory Elements for ZSCAN31 Gene

Proteins for ZSCAN31 Gene

  • Protein details for ZSCAN31 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96LW9-ZSC31_HUMAN
    Recommended name:
    Zinc finger and SCAN domain-containing protein 31
    Protein Accession:
    Q96LW9
    Secondary Accessions:
    • Q6P178
    • Q8WWS5

    Protein attributes for ZSCAN31 Gene

    Size:
    406 amino acids
    Molecular mass:
    47293 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZSCAN31 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZSCAN31 Gene

Proteomics data for ZSCAN31 Gene at MOPED

Post-translational modifications for ZSCAN31 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZSCAN31 Gene

Domains for ZSCAN31 Gene

Gene Families for ZSCAN31 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Graphical View of Domain Structure for InterPro Entry

Q96LW9

UniProtKB/Swiss-Prot:

ZSC31_HUMAN :
  • Q96LW9
Domain:
  • Contains 1 SCAN box domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 6 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZSCAN31: view

No data available for Suggested Antigen Peptide Sequences for ZSCAN31 Gene

Function for ZSCAN31 Gene

Molecular function for ZSCAN31 Gene

UniProtKB/Swiss-Prot Function:
May function as a transcription factor. May be involved in the development of multiple embryonic organs

Gene Ontology (GO) - Molecular Function for ZSCAN31 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZSCAN31: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZSCAN31 Gene

Localization for ZSCAN31 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZSCAN31 Gene

Gene Ontology (GO) - Cellular Components for ZSCAN31 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZSCAN31: view

No data available for Subcellular locations from COMPARTMENTS for ZSCAN31 Gene

Pathways for ZSCAN31 Gene

SuperPathways for ZSCAN31 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZSCAN31 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZSCAN31: view

No data available for Pathways by source for ZSCAN31 Gene

Transcripts for ZSCAN31 Gene

Unigene Clusters for ZSCAN31 Gene

Zinc finger and SCAN domain containing 31:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZSCAN31

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZSCAN31 Gene

No ASD Table

Relevant External Links for ZSCAN31 Gene

GeneLoc Exon Structure for
ZSCAN31
ECgene alternative splicing isoforms for
ZSCAN31

Expression for ZSCAN31 Gene

mRNA expression in normal human tissues for ZSCAN31 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues for ZSCAN31 Gene

This gene is overexpressed in Skin (68.9).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZSCAN31 Gene

SOURCE GeneReport for Unigene cluster for ZSCAN31 Gene Hs.656413

mRNA Expression by UniProt/SwissProt for ZSCAN31 Gene

Q96LW9-ZSC31_HUMAN
Tissue specificity: Expressed at high levels in the lung, liver, and kidney, while weakly expressed in intestine, brain, muscle, cholecyst, heart, and pancreas.
genes like me logo Genes that share expressions with ZSCAN31: view

Expression partners for ZSCAN31 Gene

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for ZSCAN31 Gene

Orthologs for ZSCAN31 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZSCAN31 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF323 35
  • 86.54 (n)
  • 79.31 (a)
ZNF323 36
  • 74 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ZNF323 35
  • 99.67 (n)
  • 99.51 (a)
ZNF323 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZSCAN31 36
  • 71 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 30 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 28 (a)
ManyToMany
chicken
(Gallus gallus)
Aves ZFP92 36
  • 31 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 31 (a)
ManyToMany
Species with no ortholog for ZSCAN31:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZSCAN31 Gene

ENSEMBL:
Gene Tree for ZSCAN31 (if available)
TreeFam:
Gene Tree for ZSCAN31 (if available)

Paralogs for ZSCAN31 Gene

Pseudogenes.org Pseudogenes for ZSCAN31 Gene

genes like me logo Genes that share paralogs with ZSCAN31: view

Variants for ZSCAN31 Gene

Sequence variations from dbSNP and Humsavar for ZSCAN31 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs9301 -- 28,324,929(-) TAAAT(A/G)TGCAT utr-variant-3-prime, intron-variant
rs213244 -- 28,339,131(+) ccaag(A/C)gcata upstream-variant-2KB
rs723475 -- 28,337,064(-) CCTAC(A/C)TACGT upstream-variant-2KB, utr-variant-5-prime
rs723476 -- 28,337,327(-) GTTAG(A/G)GATCC upstream-variant-2KB, utr-variant-5-prime
rs853675 -- 28,332,814(-) GGGGA(C/G)ACCCC intron-variant

Relevant External Links for ZSCAN31 Gene

HapMap Linkage Disequilibrium report
ZSCAN31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZSCAN31 Gene

Disorders for ZSCAN31 Gene

No disorders were found for ZSCAN31 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ZSCAN31 Gene

Publications for ZSCAN31 Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. A novel human SCAN/(Cys)2(His)2 zinc-finger transcription factor ZNF323 in early human embryonic development. (PMID: 12147252) Pi H. … Liu M. (Biochem. Biophys. Res. Commun. 2002) 3 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PMID: 8125298) Maruyama K. … Sugano S. (Gene 1994) 3

Products for ZSCAN31 Gene

Sources for ZSCAN31 Gene

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