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Aliases for ZSCAN31 Gene

Aliases for ZSCAN31 Gene

  • Zinc Finger And SCAN Domain Containing 31 2 3 5
  • Zinc Finger Protein 323 2 3 4
  • ZNF310P 3 4
  • ZNF323 3 4
  • Zinc Finger Protein 310 Pseudogene 2
  • ZNF20-Lp 3

External Ids for ZSCAN31 Gene

Previous HGNC Symbols for ZSCAN31 Gene

  • ZNF310P
  • ZNF323

Previous GeneCards Identifiers for ZSCAN31 Gene

  • GC06M028296
  • GC06M028325

Summaries for ZSCAN31 Gene

Entrez Gene Summary for ZSCAN31 Gene

  • This gene encodes a protein containing multiple C2H2-type zinc finger motifs. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016]

GeneCards Summary for ZSCAN31 Gene

ZSCAN31 (Zinc Finger And SCAN Domain Containing 31) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZSCAN16.

UniProtKB/Swiss-Prot for ZSCAN31 Gene

  • May function as a transcription factor. May be involved in the development of multiple embryonic organs.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZSCAN31 Gene

Genomics for ZSCAN31 Gene

Regulatory Elements for ZSCAN31 Gene

Promoters for ZSCAN31 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZSCAN31 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZSCAN31 Gene

Chromosome:
6
Start:
28,312,837 bp from pter
End:
28,356,271 bp from pter
Size:
43,435 bases
Orientation:
Minus strand

Genomic View for ZSCAN31 Gene

Genes around ZSCAN31 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZSCAN31 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZSCAN31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZSCAN31 Gene

Proteins for ZSCAN31 Gene

  • Protein details for ZSCAN31 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96LW9-ZSC31_HUMAN
    Recommended name:
    Zinc finger and SCAN domain-containing protein 31
    Protein Accession:
    Q96LW9
    Secondary Accessions:
    • Q6P178
    • Q8WWS5

    Protein attributes for ZSCAN31 Gene

    Size:
    406 amino acids
    Molecular mass:
    47293 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZSCAN31 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZSCAN31 Gene

Proteomics data for ZSCAN31 Gene at MOPED

Post-translational modifications for ZSCAN31 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZSCAN31 Gene

Domains & Families for ZSCAN31 Gene

Gene Families for ZSCAN31 Gene

Suggested Antigen Peptide Sequences for ZSCAN31 Gene

Graphical View of Domain Structure for InterPro Entry

Q96LW9

UniProtKB/Swiss-Prot:

ZSC31_HUMAN :
  • Contains 1 SCAN box domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 6 C2H2-type zinc fingers.
Domain:
  • Contains 1 SCAN box domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 6 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZSCAN31: view

Function for ZSCAN31 Gene

Molecular function for ZSCAN31 Gene

UniProtKB/Swiss-Prot Function:
May function as a transcription factor. May be involved in the development of multiple embryonic organs.
genes like me logo Genes that share phenotypes with ZSCAN31: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZSCAN31 Gene

Localization for ZSCAN31 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZSCAN31 Gene

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZSCAN31 Gene

Pathways & Interactions for ZSCAN31 Gene

SuperPathways for ZSCAN31 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZSCAN31 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZSCAN31 Gene

Drugs & Compounds for ZSCAN31 Gene

No Compound Related Data Available

Transcripts for ZSCAN31 Gene

Unigene Clusters for ZSCAN31 Gene

Zinc finger and SCAN domain containing 31:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZSCAN31 Gene

No ASD Table

Relevant External Links for ZSCAN31 Gene

GeneLoc Exon Structure for
ZSCAN31
ECgene alternative splicing isoforms for
ZSCAN31

Expression for ZSCAN31 Gene

mRNA expression in normal human tissues for ZSCAN31 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for ZSCAN31 Gene

This gene is overexpressed in Skin (68.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZSCAN31 Gene



SOURCE GeneReport for Unigene cluster for ZSCAN31 Gene Hs.656413

mRNA Expression by UniProt/SwissProt for ZSCAN31 Gene

Q96LW9-ZSC31_HUMAN
Tissue specificity: Expressed at high levels in the lung, liver, and kidney, while weakly expressed in intestine, brain, muscle, cholecyst, heart, and pancreas.
genes like me logo Genes that share expression patterns with ZSCAN31: view

Protein tissue co-expression partners for ZSCAN31 Gene

Primer Products

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for ZSCAN31 Gene

Orthologs for ZSCAN31 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZSCAN31 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF323 35
  • 86.54 (n)
  • 79.31 (a)
ZNF323 36
  • 74 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ZNF323 35
  • 99.67 (n)
  • 99.51 (a)
ZNF323 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZSCAN31 36
  • 71 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 30 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 28 (a)
ManyToMany
chicken
(Gallus gallus)
Aves ZFP92 36
  • 31 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 31 (a)
ManyToMany
Species with no ortholog for ZSCAN31:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZSCAN31 Gene

ENSEMBL:
Gene Tree for ZSCAN31 (if available)
TreeFam:
Gene Tree for ZSCAN31 (if available)

Paralogs for ZSCAN31 Gene

Pseudogenes.org Pseudogenes for ZSCAN31 Gene

genes like me logo Genes that share paralogs with ZSCAN31: view

Variants for ZSCAN31 Gene

Sequence variations from dbSNP and Humsavar for ZSCAN31 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs853678 - 28,329,536(-) AAGAG(A/G/T)CTCCT intron-variant, nc-transcript-variant, reference, missense
rs853684 - 28,326,773(-) TAGCA(A/G)ACTCC nc-transcript-variant, reference, missense
rs6922302 - 28,327,533(+) TGGAG(C/G)CTGAA nc-transcript-variant, reference, missense, utr-variant-5-prime
rs34223404 - 28,326,722(+) TGTCT(C/T)GTTTA nc-transcript-variant, reference, missense
rs2394051 - 28,326,293(+) AAAGC(C/T)CTGCA nc-transcript-variant, reference, missense

Variation tolerance for ZSCAN31 Gene

Residual Variation Intolerance Score: 30.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.45; 77.36% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZSCAN31 Gene

HapMap Linkage Disequilibrium report
ZSCAN31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZSCAN31 Gene

Disorders for ZSCAN31 Gene

Relevant External Links for ZSCAN31

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZSCAN31

No disorders were found for ZSCAN31 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZSCAN31 Gene

Publications for ZSCAN31 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 67
  2. An atlas of combinatorial transcriptional regulation in mouse and man. (PMID: 20211142) Ravasi T. … Hayashizaki Y. (Cell 2010) 3
  3. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 3

Products for ZSCAN31 Gene

Sources for ZSCAN31 Gene

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