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Aliases for ZSCAN26 Gene

Aliases for ZSCAN26 Gene

  • Zinc Finger And SCAN Domain Containing 26 2 3 5
  • Zinc Finger Protein 187 2 3 4
  • ZNF187 3 4
  • Protein SRE-ZBP 4
  • SRE-ZBP 3
  • SREZBP 3

External Ids for ZSCAN26 Gene

Previous HGNC Symbols for ZSCAN26 Gene

  • ZNF187

Summaries for ZSCAN26 Gene

GeneCards Summary for ZSCAN26 Gene

ZSCAN26 (Zinc Finger And SCAN Domain Containing 26) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZSCAN16.

UniProtKB/Swiss-Prot for ZSCAN26 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZSCAN26 Gene

Genomics for ZSCAN26 Gene

Regulatory Elements for ZSCAN26 Gene

Promoters for ZSCAN26 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZSCAN26 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZSCAN26 Gene

Chromosome:
6
Start:
28,267,010 bp from pter
End:
28,278,224 bp from pter
Size:
11,215 bases
Orientation:
Plus strand

Genomic View for ZSCAN26 Gene

Genes around ZSCAN26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZSCAN26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZSCAN26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZSCAN26 Gene

Proteins for ZSCAN26 Gene

  • Protein details for ZSCAN26 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q16670-ZSC26_HUMAN
    Recommended name:
    Zinc finger and SCAN domain-containing protein 26
    Protein Accession:
    Q16670
    Secondary Accessions:
    • Q5JPG4
    • Q7Z3Q6
    • Q96A17

    Protein attributes for ZSCAN26 Gene

    Size:
    478 amino acids
    Molecular mass:
    55254 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAD97775.1; Type=Frameshift; Positions=155, 353; Evidence={ECO:0000305};

    Alternative splice isoforms for ZSCAN26 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZSCAN26 Gene

Proteomics data for ZSCAN26 Gene at MOPED

Post-translational modifications for ZSCAN26 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZSCAN26 Gene

Domains & Families for ZSCAN26 Gene

Gene Families for ZSCAN26 Gene

Suggested Antigen Peptide Sequences for ZSCAN26 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q16670

UniProtKB/Swiss-Prot:

ZSC26_HUMAN :
  • Contains 1 SCAN box domain.
  • Contains 8 C2H2-type zinc fingers.
Domain:
  • Contains 1 SCAN box domain.
Similarity:
  • Contains 8 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZSCAN26: view

Function for ZSCAN26 Gene

Molecular function for ZSCAN26 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.
UniProtKB/Swiss-Prot Induction:
By serum stimulation.

Gene Ontology (GO) - Molecular Function for ZSCAN26 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ZSCAN26: view
genes like me logo Genes that share phenotypes with ZSCAN26: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZSCAN26 Gene

Localization for ZSCAN26 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZSCAN26 Gene

Gene Ontology (GO) - Cellular Components for ZSCAN26 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA --
genes like me logo Genes that share ontologies with ZSCAN26: view

No data available for Subcellular locations from COMPARTMENTS for ZSCAN26 Gene

Pathways & Interactions for ZSCAN26 Gene

SuperPathways for ZSCAN26 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZSCAN26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZSCAN26 Gene

Drugs & Compounds for ZSCAN26 Gene

No Compound Related Data Available

Transcripts for ZSCAN26 Gene

Unigene Clusters for ZSCAN26 Gene

Zinc finger and SCAN domain containing 26:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZSCAN26 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c · 6d · 6e ^ 7a · 7b · 7c · 7d · 7e ^ 8a · 8b · 8c · 8d · 8e · 8f ·
SP1: - - - -
SP2: - - - - - - - -
SP3: - - -
SP4: - - -
SP5: - - - - - - -
SP6: - -
SP7: -
SP8: - - -
SP9: -
SP10: -
SP11: - - - - - - - - - - - - - - -
SP12: - - -
SP13:

ExUns: 8g
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:

Relevant External Links for ZSCAN26 Gene

GeneLoc Exon Structure for
ZSCAN26
ECgene alternative splicing isoforms for
ZSCAN26

Expression for ZSCAN26 Gene

mRNA expression in normal human tissues for ZSCAN26 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for ZSCAN26 Gene

This gene is overexpressed in CD8 Tcells (47.6), Blymphocyte (11.7), and Ovary (9.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZSCAN26 Gene



SOURCE GeneReport for Unigene cluster for ZSCAN26 Gene Hs.157883

genes like me logo Genes that share expression patterns with ZSCAN26: view

Protein tissue co-expression partners for ZSCAN26 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZSCAN26 Gene

Orthologs for ZSCAN26 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZSCAN26 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF187 35
  • 99.58 (n)
  • 99.16 (a)
cow
(Bos Taurus)
Mammalia ZSCAN26 35
  • 85.73 (n)
  • 81 (a)
dog
(Canis familiaris)
Mammalia ZSCAN26 35
  • 83.44 (n)
  • 79.04 (a)
mouse
(Mus musculus)
Mammalia Zscan26 35
  • 78.57 (n)
  • 70.24 (a)
Zscan26 16
rat
(Rattus norvegicus)
Mammalia Zfp187 35
  • 79.9 (n)
  • 73.1 (a)
Species with no ortholog for ZSCAN26:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZSCAN26 Gene

ENSEMBL:
Gene Tree for ZSCAN26 (if available)
TreeFam:
Gene Tree for ZSCAN26 (if available)

Paralogs for ZSCAN26 Gene

(446) SIMAP similar genes for ZSCAN26 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZSCAN26: view

Variants for ZSCAN26 Gene

Sequence variations from dbSNP and Humsavar for ZSCAN26 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs17851075 - 28,276,319(+) GAAAG(G/T)CATCA reference, missense
rs16893892 - 28,272,095(+) GCGTT(A/G)TGAAG intron-variant, reference, missense, utr-variant-5-prime
rs11965538 - 28,272,137(+) GCTCC(A/G/T)GGAGC intron-variant, reference, missense, utr-variant-5-prime
rs11965542 - 28,272,166(+) AGCCC(A/C/G)AGACC intron-variant, reference, missense, utr-variant-5-prime
rs1225600 -- 28,269,667(+) tcagt(C/T)tgaag intron-variant

Relevant External Links for ZSCAN26 Gene

HapMap Linkage Disequilibrium report
ZSCAN26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZSCAN26 Gene

Disorders for ZSCAN26 Gene

Relevant External Links for ZSCAN26

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZSCAN26

No disorders were found for ZSCAN26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZSCAN26 Gene

Publications for ZSCAN26 Gene

  1. Expression cloning of a novel zinc finger protein that binds to the c-fos serum response element. (PMID: 1569959) Attar R.M. … Gilman M.Z. (Mol. Cell. Biol. 1992) 2 3 4 67
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3
  5. The transcriptome of human CD34+ hematopoietic stem-progenitor cells. (PMID: 19416867) Kim Y.C. … Wang S.M. (Proc. Natl. Acad. Sci. U.S.A. 2009) 3

Products for ZSCAN26 Gene

Sources for ZSCAN26 Gene

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