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Aliases for ZSCAN16-AS1 Gene

Subcategory (RNA class) for ZSCAN16-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ZSCAN16-AS1 Gene

  • ZSCAN16 Antisense RNA 1 2 3

External Ids for ZSCAN16-AS1 Gene

Previous GeneCards Identifiers for ZSCAN16-AS1 Gene

  • GC06M028059

Summaries for ZSCAN16-AS1 Gene

GeneCards Summary for ZSCAN16-AS1 Gene

ZSCAN16-AS1 (ZSCAN16 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZSCAN16-AS1 Gene

Genomics for ZSCAN16-AS1 Gene

Genomic Location for ZSCAN16-AS1 Gene

Start:
28,121,795 bp from pter
End:
28,137,316 bp from pter
Size:
15,522 bases
Orientation:
Minus strand

Genomic View for ZSCAN16-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZSCAN16-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZSCAN16-AS1 Gene

No data available for Regulatory Elements for ZSCAN16-AS1 Gene

Proteins for ZSCAN16-AS1 Gene

Post-translational modifications for ZSCAN16-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZSCAN16-AS1 Gene

Domains for ZSCAN16-AS1 Gene

Gene Families for ZSCAN16-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZSCAN16-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZSCAN16-AS1 Gene

Function for ZSCAN16-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZSCAN16-AS1 Gene

Localization for ZSCAN16-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZSCAN16-AS1 Gene

Pathways for ZSCAN16-AS1 Gene

SuperPathways for ZSCAN16-AS1 Gene

No Data Available

Interacting Proteins for ZSCAN16-AS1 Gene

Gene Ontology (GO) - Biological Process for ZSCAN16-AS1 Gene

None

No data available for Pathways by source for ZSCAN16-AS1 Gene

Transcripts for ZSCAN16-AS1 Gene

mRNA/cDNA for ZSCAN16-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZSCAN16-AS1
    • Block miRNA regulation of ZSCAN16-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ZSCAN16-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ZSCAN16-AS1 Gene

    No ASD Table

    Relevant External Links for ZSCAN16-AS1 Gene

    GeneLoc Exon Structure for
    ZSCAN16-AS1
    ECgene alternative splicing isoforms for
    ZSCAN16-AS1

    Expression for ZSCAN16-AS1 Gene

    mRNA expression in normal human tissues for ZSCAN16-AS1 Gene

    genes like me logo Genes that share expressions with ZSCAN16-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ZSCAN16-AS1 Gene

    Orthologs for ZSCAN16-AS1 Gene

    Evolution for ZSCAN16-AS1 Gene

    ENSEMBL:
    Gene Tree for ZSCAN16-AS1 (if available)
    TreeFam:
    Gene Tree for ZSCAN16-AS1 (if available)

    No data available for Orthologs for ZSCAN16-AS1 Gene

    Paralogs for ZSCAN16-AS1 Gene

    No data available for Paralogs for ZSCAN16-AS1 Gene

    Variants for ZSCAN16-AS1 Gene

    Sequence variations from dbSNP and Humsavar for ZSCAN16-AS1 Gene

    SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
    rs1225709 -- 28,135,870(-) CAAGC(A/G)GAATT intron-variant
    rs1225710 -- 28,132,862(-) TGGTT(A/G)TAGTG intron-variant
    rs1225711 -- 28,131,573(-) CTTAT(A/G)GTTTT intron-variant
    rs1233784 -- 28,131,147(-) gaggc(A/T)gaggc intron-variant
    rs1340004 -- 28,135,913(-) AACAG(A/G)GATTT intron-variant

    Relevant External Links for ZSCAN16-AS1 Gene

    HapMap Linkage Disequilibrium report
    ZSCAN16-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZSCAN16-AS1 Gene

    Disorders for ZSCAN16-AS1 Gene

    No disorders were found for ZSCAN16-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for ZSCAN16-AS1 Gene

    Publications for ZSCAN16-AS1 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for ZSCAN16-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate ZSCAN16-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for ZSCAN16-AS1
      • Block miRNA regulation of ZSCAN16-AS1 using miScript Target Protectors

      Sources for ZSCAN16-AS1 Gene

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