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Aliases for ZSCAN16-AS1 Gene

Subcategory (RNA class) for ZSCAN16-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZSCAN16-AS1 Gene

  • ZSCAN16 Antisense RNA 1 2 3 5

External Ids for ZSCAN16-AS1 Gene

Previous GeneCards Identifiers for ZSCAN16-AS1 Gene

  • GC06M028059

Summaries for ZSCAN16-AS1 Gene

GeneCards Summary for ZSCAN16-AS1 Gene

ZSCAN16-AS1 (ZSCAN16 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZSCAN16-AS1 Gene

Genomics for ZSCAN16-AS1 Gene

Regulatory Elements for ZSCAN16-AS1 Gene

Enhancers for ZSCAN16-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ZSCAN16-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZSCAN16-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZSCAN16-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZSCAN16-AS1 Gene

Chromosome:
6
Start:
28,121,795 bp from pter
End:
28,137,316 bp from pter
Size:
15,522 bases
Orientation:
Minus strand

Genomic View for ZSCAN16-AS1 Gene

Genes around ZSCAN16-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZSCAN16-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZSCAN16-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZSCAN16-AS1 Gene

Proteins for ZSCAN16-AS1 Gene

Post-translational modifications for ZSCAN16-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZSCAN16-AS1 Gene

Domains & Families for ZSCAN16-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZSCAN16-AS1 Gene

Function for ZSCAN16-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZSCAN16-AS1 Gene

Localization for ZSCAN16-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZSCAN16-AS1 Gene

Pathways & Interactions for ZSCAN16-AS1 Gene

SuperPathways for ZSCAN16-AS1 Gene

No Data Available

Interacting Proteins for ZSCAN16-AS1 Gene

Gene Ontology (GO) - Biological Process for ZSCAN16-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZSCAN16-AS1 Gene

Drugs & Compounds for ZSCAN16-AS1 Gene

No Compound Related Data Available

Transcripts for ZSCAN16-AS1 Gene

mRNA/cDNA for ZSCAN16-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZSCAN16-AS1 Gene

No ASD Table

Relevant External Links for ZSCAN16-AS1 Gene

GeneLoc Exon Structure for
ZSCAN16-AS1
ECgene alternative splicing isoforms for
ZSCAN16-AS1

Expression for ZSCAN16-AS1 Gene

mRNA expression in normal human tissues for ZSCAN16-AS1 Gene

genes like me logo Genes that share expression patterns with ZSCAN16-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ZSCAN16-AS1 Gene

Orthologs for ZSCAN16-AS1 Gene

Evolution for ZSCAN16-AS1 Gene

ENSEMBL:
Gene Tree for ZSCAN16-AS1 (if available)
TreeFam:
Gene Tree for ZSCAN16-AS1 (if available)

No data available for Orthologs for ZSCAN16-AS1 Gene

Paralogs for ZSCAN16-AS1 Gene

No data available for Paralogs for ZSCAN16-AS1 Gene

Variants for ZSCAN16-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZSCAN16-AS1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1225710 -- 28,132,862(-) TGGTT(A/G)TAGTG intron-variant
rs1225711 -- 28,131,573(-) CTTAT(A/G)GTTTT intron-variant
rs1233784 -- 28,131,147(-) gaggc(A/T)gaggc intron-variant
rs1631552 -- 28,121,921(-) AAATT(G/T)GGAAA nc-transcript-variant
rs1654777 -- 28,122,195(-) AATAG(C/T)GAATA nc-transcript-variant

Relevant External Links for ZSCAN16-AS1 Gene

HapMap Linkage Disequilibrium report
ZSCAN16-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZSCAN16-AS1 Gene

Disorders for ZSCAN16-AS1 Gene

Relevant External Links for ZSCAN16-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZSCAN16-AS1

No disorders were found for ZSCAN16-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZSCAN16-AS1 Gene

Publications for ZSCAN16-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67

Products for ZSCAN16-AS1 Gene

Sources for ZSCAN16-AS1 Gene

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