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Aliases for ZSCAN12P1 Gene

Aliases for ZSCAN12P1 Gene

  • Zinc Finger And SCAN Domain Containing 12 Pseudogene 1 2 3 5
  • Zinc Finger And SCAN Domain Containing 12-Like 1 2 3
  • Zinc Finger Protein 305 Pseudogene 1 2 3
  • Zinc Finger Protein 96 Pseudogene 1 2 3
  • Zinc Finger Protein 96-Like 1 2 3
  • DJ313I6.7 3
  • ZSCAN12L1 3
  • ZNF187p1 3
  • ZNF305P1 3
  • ZNF96L1 3
  • ZNF96P1 3

External Ids for ZSCAN12P1 Gene

Previous HGNC Symbols for ZSCAN12P1 Gene

  • ZNF305P1
  • ZNF96P1
  • ZNF96L1
  • ZSCAN12L1

Previous GeneCards Identifiers for ZSCAN12P1 Gene

  • GC06P028058
  • GC06P027866

Summaries for ZSCAN12P1 Gene

GeneCards Summary for ZSCAN12P1 Gene

ZSCAN12P1 (Zinc Finger And SCAN Domain Containing 12 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZSCAN12P1 Gene

Genomics for ZSCAN12P1 Gene

Regulatory Elements for ZSCAN12P1 Gene

Enhancers for ZSCAN12P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G028166 0.9 ENCODE 8.5 +76.4 76383 1.2 HDAC1 PKNOX1 ZNF2 ZBTB40 RAD21 ZNF335 GLIS2 ELK1 SCRT2 MXD4 ZKSCAN8 ZNF165 ZSCAN12 ZNF192P1 ZSCAN12P1 ZNF602P ZSCAN31 ENSG00000280107 PIR42392
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZSCAN12P1 on UCSC Golden Path with GeneCards custom track

Promoters for ZSCAN12P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195190 194 400 ZBTB33

Genomic Location for ZSCAN12P1 Gene

Chromosome:
6
Start:
28,090,807 bp from pter
End:
28,095,715 bp from pter
Size:
4,909 bases
Orientation:
Plus strand

Genomic View for ZSCAN12P1 Gene

Genes around ZSCAN12P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZSCAN12P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZSCAN12P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZSCAN12P1 Gene

Proteins for ZSCAN12P1 Gene

Post-translational modifications for ZSCAN12P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZSCAN12P1 Gene

Domains & Families for ZSCAN12P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZSCAN12P1 Gene

Function for ZSCAN12P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZSCAN12P1 Gene

Localization for ZSCAN12P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZSCAN12P1 Gene

Pathways & Interactions for ZSCAN12P1 Gene

SuperPathways for ZSCAN12P1 Gene

No Data Available

Interacting Proteins for ZSCAN12P1 Gene

Gene Ontology (GO) - Biological Process for ZSCAN12P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZSCAN12P1 Gene

Drugs & Compounds for ZSCAN12P1 Gene

No Compound Related Data Available

Transcripts for ZSCAN12P1 Gene

mRNA/cDNA for ZSCAN12P1 Gene

(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZSCAN12P1 Gene

Zinc finger and SCAN domain containing 12 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZSCAN12P1 Gene

No ASD Table

Relevant External Links for ZSCAN12P1 Gene

GeneLoc Exon Structure for
ZSCAN12P1
ECgene alternative splicing isoforms for
ZSCAN12P1

Expression for ZSCAN12P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZSCAN12P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZSCAN12P1 Gene:

ZSCAN12P1

SOURCE GeneReport for Unigene cluster for ZSCAN12P1 Gene:

Hs.634723
genes like me logo Genes that share expression patterns with ZSCAN12P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZSCAN12P1 Gene

Orthologs for ZSCAN12P1 Gene

Evolution for ZSCAN12P1 Gene

ENSEMBL:
Gene Tree for ZSCAN12P1 (if available)
TreeFam:
Gene Tree for ZSCAN12P1 (if available)

No data available for Orthologs for ZSCAN12P1 Gene

Paralogs for ZSCAN12P1 Gene

No data available for Paralogs for ZSCAN12P1 Gene

Variants for ZSCAN12P1 Gene

Sequence variations from dbSNP and Humsavar for ZSCAN12P1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000085812 -- 28,092,467(+) TAAAT(C/T)TCAAA intron-variant, nc-transcript-variant
rs1002179837 -- 28,094,735(+) ATTTA(G/T)TATTT intron-variant, nc-transcript-variant
rs1002782970 -- 28,095,515(+) ATCTC(A/G)TTGTT intron-variant, nc-transcript-variant
rs1003868388 -- 28,095,930(+) CTTCT(A/G)AGTGT intron-variant
rs1005143903 -- 28,089,739(+) TCATG(A/G)TTACA intron-variant, downstream-variant-500B, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZSCAN12P1 Gene

Variant ID Type Subtype PubMed ID
nsv830619 CNV loss 17160897

Relevant External Links for ZSCAN12P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZSCAN12P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZSCAN12P1 Gene

Disorders for ZSCAN12P1 Gene

Relevant External Links for ZSCAN12P1

Genetic Association Database (GAD)
ZSCAN12P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZSCAN12P1

No disorders were found for ZSCAN12P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZSCAN12P1 Gene

Publications for ZSCAN12P1 Gene

  1. Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX. (PMID: 18204098) Hom G. … Behrens T.W. (N. Engl. J. Med. 2008) 46 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZSCAN12P1 Gene

Sources for ZSCAN12P1 Gene

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