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Aliases for ZRANB2-AS2 Gene

Subcategory (RNA class) for ZRANB2-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZRANB2-AS2 Gene

  • ZRANB2 Antisense RNA 2 (Head To Head) 2 3 5
  • ZRANB2 Antisense RNA 2 (Non-Protein Coding) 2
  • ZRANB2 Antisense RNA 2 2

External Ids for ZRANB2-AS2 Gene

Previous GeneCards Identifiers for ZRANB2-AS2 Gene

  • GC01P071548

Summaries for ZRANB2-AS2 Gene

GeneCards Summary for ZRANB2-AS2 Gene

ZRANB2-AS2 (ZRANB2 Antisense RNA 2 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZRANB2-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZRANB2-AS2 Gene

Genomics for ZRANB2-AS2 Gene

GeneHancer (GH) Regulatory Elements for ZRANB2-AS2 Gene

Promoters and enhancers for ZRANB2-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I071079 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 -0.6 -556 2.7 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 ZRANB2-AS2 ZRANB2 SRSF11 PTGER3 MIR186
GH01I071089 Enhancer 0.3 ENCODE 0.4 +8.7 8713 1.8 JUND LOC105378795 PTGER3 ZRANB2-AS2 GC01M071183
GH01I071086 Enhancer 0.3 ENCODE 0.4 +5.2 5219 0.1 MAFK PTGER3 LOC105378795 ZRANB2-AS2
GH01I071407 Enhancer 0.4 UCNEbase 0.1 +325.9 325935 0.3 GC01M071372 GC01P071485 ZRANB2-AS2 NEGR1
GH01I071365 Enhancer 0.3 Ensembl 0.1 +284.5 284512 0.7 ZSCAN4 ENSG00000226324 GC01M071353 ZRANB2-AS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZRANB2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZRANB2-AS2 Gene

Genomic Locations for ZRANB2-AS2 Gene
chr1:71,081,324-71,489,976
(GRCh38/hg38)
Size:
408,653 bases
Orientation:
Plus strand
chr1:71,547,007-71,955,652
(GRCh37/hg19)

Genomic View for ZRANB2-AS2 Gene

Genes around ZRANB2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZRANB2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZRANB2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZRANB2-AS2 Gene

Proteins for ZRANB2-AS2 Gene

Post-translational modifications for ZRANB2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZRANB2-AS2 Gene

Domains & Families for ZRANB2-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZRANB2-AS2 Gene

Function for ZRANB2-AS2 Gene

Phenotypes From GWAS Catalog for ZRANB2-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZRANB2-AS2 Gene

Localization for ZRANB2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZRANB2-AS2 Gene

Pathways & Interactions for ZRANB2-AS2 Gene

SuperPathways for ZRANB2-AS2 Gene

No Data Available

Interacting Proteins for ZRANB2-AS2 Gene

Gene Ontology (GO) - Biological Process for ZRANB2-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZRANB2-AS2 Gene

Drugs & Compounds for ZRANB2-AS2 Gene

No Compound Related Data Available

Transcripts for ZRANB2-AS2 Gene

mRNA/cDNA for ZRANB2-AS2 Gene

(2) Additional mRNA sequences :
(38) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZRANB2-AS2 Gene

ZRANB2 antisense RNA 2 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZRANB2-AS2 Gene

No ASD Table

Relevant External Links for ZRANB2-AS2 Gene

GeneLoc Exon Structure for
ZRANB2-AS2
ECgene alternative splicing isoforms for
ZRANB2-AS2

Expression for ZRANB2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZRANB2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for ZRANB2-AS2 Gene

This gene is overexpressed in Testis (x5.1).

SOURCE GeneReport for Unigene cluster for ZRANB2-AS2 Gene:

Hs.535534
genes like me logo Genes that share expression patterns with ZRANB2-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZRANB2-AS2 Gene

Orthologs for ZRANB2-AS2 Gene

Evolution for ZRANB2-AS2 Gene

ENSEMBL:
Gene Tree for ZRANB2-AS2 (if available)
TreeFam:
Gene Tree for ZRANB2-AS2 (if available)

No data available for Orthologs for ZRANB2-AS2 Gene

Paralogs for ZRANB2-AS2 Gene

No data available for Paralogs for ZRANB2-AS2 Gene

Variants for ZRANB2-AS2 Gene

Sequence variations from dbSNP and Humsavar for ZRANB2-AS2 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000016859 -- 71,079,998(+) AAAAAAAAAA/AAAAAAAAA/AAAAAAAAAAA upstream_transcript_variant
rs1000023929 -- 71,153,470(+) T/C intron_variant
rs1000027007 -- 71,092,902(+) C/T intron_variant
rs1000031924 -- 71,153,053(+) C/T intron_variant
rs1000035946 -- 71,235,715(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ZRANB2-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv23e214 CNV loss 21293372
esv3563804 CNV deletion 23714750
esv3577915 CNV loss 25503493
esv3586376 CNV gain 21293372
esv3586377 CNV loss 21293372
nsv521769 CNV loss 19592680
nsv818211 CNV gain 17921354
nsv997782 CNV loss 25217958

Additional Variant Information for ZRANB2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZRANB2-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZRANB2-AS2 Gene

Disorders for ZRANB2-AS2 Gene

Additional Disease Information for ZRANB2-AS2

No disorders were found for ZRANB2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZRANB2-AS2 Gene

Publications for ZRANB2-AS2 Gene

  1. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ZRANB2-AS2 Gene

Sources for ZRANB2-AS2 Gene

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