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Aliases for ZRANB2-AS1 Gene

Subcategory (RNA class) for ZRANB2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZRANB2-AS1 Gene

  • ZRANB2 Antisense RNA 1 2 3 5
  • ZRANB2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZRANB2-AS1 Gene

Previous GeneCards Identifiers for ZRANB2-AS1 Gene

  • GC01P071513

Summaries for ZRANB2-AS1 Gene

GeneCards Summary for ZRANB2-AS1 Gene

ZRANB2-AS1 (ZRANB2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZRANB2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZRANB2-AS1 Gene

Genomics for ZRANB2-AS1 Gene

Regulatory Elements for ZRANB2-AS1 Gene

Enhancers for ZRANB2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H070674 1 ENCODE 11.2 -370.8 -370755 1 PKNOX1 ATF1 ARNT TCF12 CBX5 GATA2 ELK1 ATF7 RUNX3 NCOA1 PTGER3 ZRANB2-AS1 MIR186 ZRANB2 CASP3P1 LINC01788
GH01H071016 0.5 dbSUPER 13.2 -26.4 -26447 7 ZNF184 ZSCAN4 RCOR1 PTGER3 ZRANB2-AS1 ENSG00000235782 MIR186 ZRANB2 GC01M071006
GH01H071011 0.4 dbSUPER 11.1 -34.4 -34385 1 CEBPG PTGER3 ZRANB2-AS1 MIR186 ZRANB2 GC01M071006
GH01H071007 0.2 dbSUPER 11.2 -38.1 -38105 1 PTGER3 ZRANB2-AS1 GC01M071006
GH01H071046 1.4 Ensembl ENCODE dbSUPER 0.7 +0.8 776 1 HDAC1 TBP ATF1 RB1 NFRKB ZNF766 EGR1 ATF7 EGR2 SP3 SRSF11 PTGER3 ZRANB2-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZRANB2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZRANB2-AS1 Gene

Chromosome:
1
Start:
71,046,506 bp from pter
End:
71,067,184 bp from pter
Size:
20,679 bases
Orientation:
Plus strand

Genomic View for ZRANB2-AS1 Gene

Genes around ZRANB2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZRANB2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZRANB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZRANB2-AS1 Gene

Proteins for ZRANB2-AS1 Gene

Post-translational modifications for ZRANB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZRANB2-AS1 Gene

Domains & Families for ZRANB2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZRANB2-AS1 Gene

Function for ZRANB2-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ZRANB2-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZRANB2-AS1 Gene

Localization for ZRANB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZRANB2-AS1 Gene

Pathways & Interactions for ZRANB2-AS1 Gene

SuperPathways for ZRANB2-AS1 Gene

No Data Available

Interacting Proteins for ZRANB2-AS1 Gene

Gene Ontology (GO) - Biological Process for ZRANB2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZRANB2-AS1 Gene

Drugs & Compounds for ZRANB2-AS1 Gene

No Compound Related Data Available

Transcripts for ZRANB2-AS1 Gene

mRNA/cDNA for ZRANB2-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZRANB2-AS1 Gene

ZRANB2 antisense RNA 1:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ZRANB2-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for ZRANB2-AS1 Gene

No ASD Table

Relevant External Links for ZRANB2-AS1 Gene

GeneLoc Exon Structure for
ZRANB2-AS1
ECgene alternative splicing isoforms for
ZRANB2-AS1

Expression for ZRANB2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZRANB2-AS1 Gene

SOURCE GeneReport for Unigene cluster for ZRANB2-AS1 Gene:

Hs.720513
genes like me logo Genes that share expression patterns with ZRANB2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZRANB2-AS1 Gene

Orthologs for ZRANB2-AS1 Gene

Evolution for ZRANB2-AS1 Gene

ENSEMBL:
Gene Tree for ZRANB2-AS1 (if available)
TreeFam:
Gene Tree for ZRANB2-AS1 (if available)

No data available for Orthologs for ZRANB2-AS1 Gene

Paralogs for ZRANB2-AS1 Gene

No data available for Paralogs for ZRANB2-AS1 Gene

Variants for ZRANB2-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZRANB2-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000032861 -- 71,053,004(+) CAGCT(C/T)TGTTG intron-variant
rs1000081753 -- 71,059,476(+) ATTGG(C/G)TGTCT intron-variant
rs1000374071 -- 71,062,429(+) GTGAA(A/T)CCCTA intron-variant
rs1000458329 -- 71,052,582(+) ACATC(C/T)CCAAC intron-variant
rs1000627316 -- 71,045,297(+) TAATG(C/T)CTAAT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZRANB2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv546472 CNV gain 21841781
nsv945995 CNV duplication 23825009

Relevant External Links for ZRANB2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZRANB2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZRANB2-AS1 Gene

Disorders for ZRANB2-AS1 Gene

Relevant External Links for ZRANB2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZRANB2-AS1

No disorders were found for ZRANB2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZRANB2-AS1 Gene

Publications for ZRANB2-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ZRANB2-AS1 Gene

Sources for ZRANB2-AS1 Gene

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