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Aliases for ZRANB2-AS1 Gene

Subcategory (RNA class) for ZRANB2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZRANB2-AS1 Gene

  • ZRANB2 Antisense RNA 1 2 3 5
  • ZRANB2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZRANB2-AS1 Gene

Previous GeneCards Identifiers for ZRANB2-AS1 Gene

  • GC01P071513

Summaries for ZRANB2-AS1 Gene

GeneCards Summary for ZRANB2-AS1 Gene

ZRANB2-AS1 (ZRANB2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZRANB2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZRANB2-AS1 Gene

Genomics for ZRANB2-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZRANB2-AS1 Gene

Promoters and enhancers for ZRANB2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I071046 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.8 776 1.9 ATF1 POLR2B ZNF766 ATF7 SP3 GTF2B ZNF592 CBX8 GLIS1 MEIS2 PTGER3 ZRANB2-AS1 SRSF11
GH01I071044 Enhancer 1 ENCODE dbSUPER 550.8 -1.2 -1183 0.9 MEIS2 ATF1 PKNOX1 ARNT ETV1 TEAD4 JUN ZBTB40 ZNF766 MTA3 ZRANB2-AS1 PTGER3 GC01M071006
GH01I070674 Enhancer 1 ENCODE 11.2 -370.8 -370755 1.7 PKNOX1 SMAD1 ATF1 ARNT NCOA2 TCF12 CBX5 GATA2 ATF7 RUNX3 PTGER3 ZRANB2-AS1 MIR186 ZRANB2 CASP3P1 LINC01788
GH01I071016 Enhancer 0.4 dbSUPER 13.2 -26.4 -26446 7.1 ZNF184 ZSCAN4 RCOR1 PTGER3 ZRANB2-AS1 ENSG00000235782 MIR186 ZRANB2 GC01M071006
GH01I071011 Enhancer 0.3 dbSUPER 11.2 -34.4 -34384 1.5 CEBPG PTGER3 ZRANB2-AS1 MIR186 ZRANB2 GC01M071006
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZRANB2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZRANB2-AS1 Gene

Genomic Locations for ZRANB2-AS1 Gene
chr1:71,046,506-71,067,184
(GRCh38/hg38)
Size:
20,679 bases
Orientation:
Plus strand
chr1:71,512,189-71,532,867
(GRCh37/hg19)

Genomic View for ZRANB2-AS1 Gene

Genes around ZRANB2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZRANB2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZRANB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZRANB2-AS1 Gene

Proteins for ZRANB2-AS1 Gene

Post-translational modifications for ZRANB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZRANB2-AS1 Gene

Domains & Families for ZRANB2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZRANB2-AS1 Gene

Function for ZRANB2-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZRANB2-AS1 Gene

Localization for ZRANB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZRANB2-AS1 Gene

Pathways & Interactions for ZRANB2-AS1 Gene

SuperPathways for ZRANB2-AS1 Gene

No Data Available

Interacting Proteins for ZRANB2-AS1 Gene

Gene Ontology (GO) - Biological Process for ZRANB2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZRANB2-AS1 Gene

Drugs & Compounds for ZRANB2-AS1 Gene

No Compound Related Data Available

Transcripts for ZRANB2-AS1 Gene

mRNA/cDNA for ZRANB2-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZRANB2-AS1 Gene

ZRANB2 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZRANB2-AS1 Gene

No ASD Table

Relevant External Links for ZRANB2-AS1 Gene

GeneLoc Exon Structure for
ZRANB2-AS1
ECgene alternative splicing isoforms for
ZRANB2-AS1

Expression for ZRANB2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZRANB2-AS1 Gene

SOURCE GeneReport for Unigene cluster for ZRANB2-AS1 Gene:

Hs.720513
genes like me logo Genes that share expression patterns with ZRANB2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZRANB2-AS1 Gene

Orthologs for ZRANB2-AS1 Gene

Evolution for ZRANB2-AS1 Gene

ENSEMBL:
Gene Tree for ZRANB2-AS1 (if available)
TreeFam:
Gene Tree for ZRANB2-AS1 (if available)

No data available for Orthologs for ZRANB2-AS1 Gene

Paralogs for ZRANB2-AS1 Gene

No data available for Paralogs for ZRANB2-AS1 Gene

Variants for ZRANB2-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZRANB2-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000032861 -- 71,053,004(+) T/C intron_variant
rs1000081753 -- 71,059,476(+) C/G intron_variant
rs1000374071 -- 71,062,429(+) T/A intron_variant
rs1000458329 -- 71,052,582(+) C/T intron_variant
rs1000627316 -- 71,045,297(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ZRANB2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv546472 CNV gain 21841781
nsv945995 CNV duplication 23825009

Additional Variant Information for ZRANB2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZRANB2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZRANB2-AS1 Gene

Disorders for ZRANB2-AS1 Gene

Additional Disease Information for ZRANB2-AS1

No disorders were found for ZRANB2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZRANB2-AS1 Gene

Publications for ZRANB2-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ZRANB2-AS1 Gene

Sources for ZRANB2-AS1 Gene

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