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Aliases & Descriptions for ZP3
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ZP3-372 1 ZP3-424 1 ZP3A 2 , 3 , 5 ZP3A/ZP3B 3 ZP3B 2 , 3 , 5 ZPC 2 , 3
Descriptions Sperm receptor 3 Zona pellucida glycoprotein ZP3 3 Zona pellucida protein C 2 , 3 zona pellucida glycoprotein 3 2 zona pellucida glycoprotein 3 (sperm receptor) 2 zona pellucida glycoprotein 3A (sperm receptor) 1 , 2 zona pellucida glycoprotein 3B 2 zona pellucida sperm-binding protein 3 2
Search outside databases for aliases for ZP3 genePrevious GC identifers: GC07P074589 GC07P071749 GC07P071763 GC07P075638 GC07P075671
Summaries for ZP3 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ZP3 : The zona pellucida is an extracellular matrix that surrounds the oocyte and early embryo. It iscomposed primarily of three or four glycoproteins with various functions during fertilization andpreimplantation development. The protein encoded by this gene is a structural component of thezona pellucida and functions in primary binding and induction of the sperm acrosome reaction. Thenascent protein contains a N-terminal signal peptide sequence, a conserved ZP domain, a C-terminalconsensus furin cleavage site, and a transmembrane domain. It is hypothesized that furin cleavageresults in release of the mature protein from the plasma membrane for subsequent incorporationinto the zona pellucida matrix. However, the requirement for furin cleavage in this processremains controversial based on mouse studies. A variation in the last exon of this gene haspreviously served as the basis for an additional ZP3 locus; however, sequence and literaturereview reveals that there is only one full-length ZP3 locus in the human genome. Another locusencoding a bipartite transcript designated POMZP3 contains a duplication of the last four exons ofZP3, including the above described variation, and maps closely to this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: ZP3_HUMAN, P21754 Function : The mammalian zona pellucida, which mediates species-specific sperm binding, induction ofthe acrosome reaction and prevents post-fertilization polyspermy, is composed of three to fourglycoproteins, ZP1, ZP2, ZP3, and ZP4. ZP3 is essential for sperm binding and zona matrixformation
Genomic Location for ZP3
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
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Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ZP3 gene Entrez Gene cytogenetic band: 7q11.23 Ensembl cytogenetic band: 7q11.23 HGNC chromosome: 7 ZP3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 7 GeneLoc Exon Structure
GeneLoc location for GC07P075864:
(about GC identifiers )
Start:
75,864,777 bp from pter
End:
75,909,324 bp from pter
Size:
44,548 bases
Orientation:
plus strand
1 alternative location : Chr 7+,CRA_TCAG 75,359,932-75,404,452
RefSeq DNA sequence: NC_000007.12 NT_007933.14 NT_079595.2 Proteins for ZP3
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
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Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
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UniProtKB/Swiss-Prot: ZP3_HUMAN, P21754 (See
protein sequence )Recommended Name: Zona pellucida sperm-binding protein 3 precursor Size : 424 amino acids; 47029 Da
Subunit : Polymers of ZP2 and ZP3 organized into long filaments cross-linked by ZP1 homodimers (Bysimilarity)
Subcellular location : Processed zona pellucida sperm-binding protein 3: Secreted, extracellularspace, extracellular matrix
Subcellular location : Cell membrane; Single-pass type I membrane protein
Secondary accessions : Q06633Alternative splicing : 2 isoforms : P21754-1 P21754-2
Post-translational modifications:
Proteolytically cleaved before the transmembrane segment to yield the secreted ectodomainincorporated in the zona pellucida1
N-glycosylated (By similarity)1
O-glycosylated; removal of O-linked glycans may play an important role in the post-fertilizationblock to polyspermy (By similarity)1
REFSEQ proteins (2 alternative transcripts):
NP_001103824.1 NP_009086.4 ENSEMBL proteins: ENSP00000378329 ENSP00000378326 ENSP00000337310 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ZP3: Assays for ZP3:
Protein
Domains/ Families for ZP3(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P21754 ProtoNet protein and cluster: P21754
1 Blocks protein family : IPB001507 Endoglin/CD105 antigen UniProtKB/Swiss-Prot: ZP3_HUMAN, P21754 Domain : The ZP domain is involved in the polymerization of the ZP proteins to form the zonapellucida Similarity : Belongs to the ZP domain family. ZPC subfamilySimilarity : Contains 1 ZP domain
Gene Function for ZP3
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
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Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001110354 Applied Biosystems Silencer ® siRNAs for ZP3 Sigma-Aldrich siRNA and siRNA Panels for ZP3 Sigma-Aldrich shRNA Panels and shRNA for ZP3 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001110354                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001110354                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001110354  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001110354 UniProtKB/Swiss-Prot: ZP3_HUMAN, P21754 Function : The mammalian zona pellucida, which mediates species-specific sperm binding, induction ofthe acrosome reaction and prevents post-fertilization polyspermy, is composed of three to fourglycoproteins, ZP1, ZP2, ZP3, and ZP4. ZP3 is essential for sperm binding and zona matrixformation
3 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Zp3) :2 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ZP3
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/9 Interacting proteins for ZP3 (ENSP00000337310 3 ) via UniProtKB, MINT, and/or STRING (see all 9
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007338 single fertilization
IEA --
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Drugs & Compounds for ZP3 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
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Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ZP3 5 Novoseek chemical compound relationships for ZP3 gene
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Transcripts for ZP3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
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ESTs according to GeneTide ,
exon structure from GeneLoc ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001110354 Sigma-Aldrich siRNA and siRNA Panels for ZP3 Sigma-Aldrich shRNA Panels and shRNA for ZP3 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001110354 NM_007155
REFSEQ mRNAs for ZP3 gene (2 alternative transcripts): NM_001110354.1 NM_007155.5
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001110354 NM_007155
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001110354                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001110354                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001110354  
Additional cDNA sequence: AK292763.1 BC113949.1 CR606111.1 CR623130.1 M60504.1 S52509.1
13 DOTS entries : DT.95145133 DT.121067326 DT.92469787 DT.100027278 DT.95145124 DT.95145163 DT.100790706 DT.121637693 DT.95266574 DT.95293148 DT.97769393 DT.121090535 DT.95362005
24/159 AceView cDNA sequences (see all 159
):BQ446470 CR603033 AW162786 BF195407 AI802299 AI075996 CR616549 AI359326 BF726964 BF063092 BU681121 BC000487 AW249685 CB120286 BX427701 NM_152992 AA383329 BQ673059 AW163456 AI149712 BE893300 AA334331 BV205866 BU754600
highest scoring ESTs for ZP3 :AA483619 AI634746 AK056788 AL578043 AL581007 AW672729 BG180872 BG459642 BG459670 BG459764
Unigene Cluster for ZP3: Zona pellucida glycoprotein 3 (sperm receptor) Hs.656137 [show with all ESTs ] Unigene Representative Sequence: BC113949 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for ZP3 ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b SP1 :                   SP2 :                   SP3 :           -   -      
About this scheme ECgene alternative splicing isoforms for ZP3 3 Ensembl transcripts including schematic representations : ENST00000394860
ENST00000394857
ENST00000336517
Expression for ZP3
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ZP3 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ZP3 1 / 2 / 3
6 probe-sets matching ZP3 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: AAGTAGAGCASOURCE GeneReport for Unigene cluster: Hs.656137 Expression variation in blood from EXPOLDB for ZP3
UniProtKB/Swiss-Prot: ZP3_HUMAN, P21754 Tissue specificity : Oocytes
Orthologs for ZP3
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ZP3 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for ZP3 ENSEMBL Gene Tree for ZP3 Paralogs for ZP3 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ZP3 gene POMZP3 2
SNPs/Variants for ZP3 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ZP3 (up to first 250kb)
Disorders & Mutations for ZP3
(in which this Gene is Involved, According to
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Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
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OMIM: 182889 2 Novoseek disease relationships for ZP3 gene
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Medical News for ZP3 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ZP3 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/122 PubMed articles for ZP3 gene (see all 122
): Cloning and characterization of the human sperm receptor ligand ZP3: evidence for a second polymorphic allele with a different frequency in the Caucasian and Japanese populations. (PubMed id 1478648) 1, 2, 3, 4 van Duin M.... Aitken R.J. (1992) Human homolog of the mouse sperm receptor. (PubMed id 2385582) 1, 3, 4 Chamberlin M.E. and Dean J. (1990) Species specificity of human and murine anti-ZP3 synthetic peptide antisera and use of the antibodies for localization and identification of ZP3 or ZPC domains of functional significance. (PubMed id 10099990) 1, 3 Hinsch E....Hinsch K.D. (1999) POM-ZP3, a bipartite transcript derived from human ZP3 and a POM121 homologue. (PubMed id 7789967) 1, 3 Kipersztok S.... Dean J. (1995) Effects of native human zona pellucida glycoproteins 3 and 4 on acrosome reaction and zona pellucida binding of human spermatozoa. (PubMed id 18667750) 1, 3 Chiu P.C....Yeung W.S. (2008) Mass spectrometry analysis of recombinant human ZP3 expressed in glycosylation-deficient CHO cells. (PubMed id 15379548) 1, 3 Zhao M....Dean J. (2004) Zona pellucida components are present in human fetal ovary before follicle formation. (PubMed id 18502569) 1, 3 Tormala R.M....Vaskivuo T.E. (2008) Binding of recombinant human proacrosin/acrosin to zona pellucida (ZP) glycoproteins. I. Studies with recombinant human ZPA, ZPB, and ZPC. (PubMed id 15950651) 1, 3 Furlong L.I....Vazquez-Levin M.H. (2005) Detection of zona pellucida proteins during human folliculogenesis. (PubMed id 18033806) 1, 3 Gook D.A....Martic M. (2008) Biological effects of recombinant human zona pellucida proteins on sperm function. (PubMed id 16407501) 1, 3 Caballero-Campo P....Gerton G.L. (2006)
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Genome Databases showing ZP3
(According to
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euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
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Other Databases showing ZP3
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Specialized Databases showing ZP3 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
Protein Spotlight http://www.expasy.org/spotlight/back_issues/sptlt093.shtml
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-- Services for ZP3 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for ZP3:
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