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Aliases for ZNRF3-IT1 Gene

Subcategory (RNA class) for ZNRF3-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNRF3-IT1 Gene

  • ZNRF3 Intronic Transcript 1 2 3 5
  • ZNRF3 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ZNRF3-IT1 Gene

Previous GeneCards Identifiers for ZNRF3-IT1 Gene

  • GC00U933739
  • GC22P029389

Summaries for ZNRF3-IT1 Gene

GeneCards Summary for ZNRF3-IT1 Gene

ZNRF3-IT1 (ZNRF3 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNRF3-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNRF3-IT1 Gene

Genomics for ZNRF3-IT1 Gene

GeneHancer (GH) Regulatory Elements for ZNRF3-IT1 Gene

Promoters and enhancers for ZNRF3-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I028992 Enhancer 0.5 dbSUPER 550.8 +0.3 338 1.6 ZNF121 IKZF1 FEZF1 PRDM1 ZNF7 ZNRF3-IT1 ZNRF3-AS1 ZNRF3
GH22I029028 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +38.5 38509 4.8 FOXA2 MLX ARID4B YY1 ZNF766 FOS SP3 SP5 ZHX2 REST ZNRF3-AS1 C22orf31 CCDC117 KREMEN1 ZNRF3 ENSG00000226471 XBP1 ENSG00000226772 RNU6-810P ASCC2
GH22I028982 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -7.8 -7826 5.5 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 RXRA PPARG KAT8 NFIL3 ZNRF3 C22orf31 ZNRF3-AS1 CCDC117 ZNRF3-IT1 GC22P028904
GH22I029003 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +12.0 11972 2.3 FOXA2 NFIB ARID4B SIN3A DMAP1 RAD21 ZNF48 ZSCAN9 RARA ZNF335 C22orf31 ZNRF3-AS1 ZNRF3-IT1 ZNRF3
GH22I028975 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -14.6 -14649 4.2 FOXA2 MLX ZFP64 ARID4B ZNF48 YY1 SLC30A9 TCF12 ZNF121 ATF7 ZNRF3 C22orf31 HSCB TTC28 ZNRF3-IT1 GC22P028904
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNRF3-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNRF3-IT1 Gene

Genomic Locations for ZNRF3-IT1 Gene
chr22:28,992,721-29,018,620
(GRCh38/hg38)
Size:
25,900 bases
Orientation:
Plus strand
chr22:29,388,709-29,414,608
(GRCh37/hg19)

Genomic View for ZNRF3-IT1 Gene

Genes around ZNRF3-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNRF3-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNRF3-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ZNRF3-IT1 Gene

Proteins for ZNRF3-IT1 Gene

Post-translational modifications for ZNRF3-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNRF3-IT1 Gene

Domains & Families for ZNRF3-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNRF3-IT1 Gene

Function for ZNRF3-IT1 Gene

Phenotypes From GWAS Catalog for ZNRF3-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNRF3-IT1 Gene

Localization for ZNRF3-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNRF3-IT1 Gene

Pathways & Interactions for ZNRF3-IT1 Gene

SuperPathways for ZNRF3-IT1 Gene

No Data Available

Interacting Proteins for ZNRF3-IT1 Gene

Gene Ontology (GO) - Biological Process for ZNRF3-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNRF3-IT1 Gene

Drugs & Compounds for ZNRF3-IT1 Gene

No Compound Related Data Available

Transcripts for ZNRF3-IT1 Gene

mRNA/cDNA for ZNRF3-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNRF3-IT1 Gene

No ASD Table

Relevant External Links for ZNRF3-IT1 Gene

GeneLoc Exon Structure for
ZNRF3-IT1
ECgene alternative splicing isoforms for
ZNRF3-IT1

Expression for ZNRF3-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNRF3-IT1 Gene

genes like me logo Genes that share expression patterns with ZNRF3-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNRF3-IT1 Gene

Orthologs for ZNRF3-IT1 Gene

Evolution for ZNRF3-IT1 Gene

ENSEMBL:
Gene Tree for ZNRF3-IT1 (if available)
TreeFam:
Gene Tree for ZNRF3-IT1 (if available)

No data available for Orthologs for ZNRF3-IT1 Gene

Paralogs for ZNRF3-IT1 Gene

No data available for Paralogs for ZNRF3-IT1 Gene

Variants for ZNRF3-IT1 Gene

Additional Variant Information for ZNRF3-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNRF3-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNRF3-IT1 Gene

Disorders for ZNRF3-IT1 Gene

No disorders were found for ZNRF3-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNRF3-IT1 Gene

Publications for ZNRF3-IT1 Gene

No publications were found for ZNRF3-IT1 Gene.

Products for ZNRF3-IT1 Gene

Sources for ZNRF3-IT1 Gene

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