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Aliases for ZNRF3-IT1 Gene

Subcategory (RNA class) for ZNRF3-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNRF3-IT1 Gene

  • ZNRF3 Intronic Transcript 1 2 3 5
  • ZNRF3 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ZNRF3-IT1 Gene

Previous GeneCards Identifiers for ZNRF3-IT1 Gene

  • GC00U933739
  • GC22P029389

Summaries for ZNRF3-IT1 Gene

GeneCards Summary for ZNRF3-IT1 Gene

ZNRF3-IT1 (ZNRF3 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNRF3-IT1 Gene

Genomics for ZNRF3-IT1 Gene

Regulatory Elements for ZNRF3-IT1 Gene

Enhancers for ZNRF3-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G028992 1.1 dbSUPER 0.7 +0.3 338 1.6 PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 FEZF1 ZNF2 YY1 SLC30A9 ZNRF3-IT1 ZNRF3-AS1
GH22G028988 1 ENCODE dbSUPER 0.7 -3.5 -3532 2.1 PKNOX1 GLI4 ZNF644 ZNF7 ZFHX2 GATA3 CTBP1 POLR2A EED NR2F6 C22orf31 ZNRF3-IT1 GC22P028904
GH22G028982 1.5 Ensembl ENCODE dbSUPER 0.4 -7.8 -7826 5.5 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 ZNF121 FOS ZHX2 PPARG ZNRF3 C22orf31 ZNRF3-AS1 CCDC117 ZNRF3-IT1 GC22P028904
GH22G028975 1.5 Ensembl ENCODE dbSUPER 0.4 -14.7 -14650 4.2 FOXA2 MLX ZFP64 ARID4B ZNF48 YY1 TCF12 SLC30A9 ZNF121 FOS ZNRF3 C22orf31 HSCB TTC28 ZNRF3-IT1 GC22P028904
GH22G029003 1.4 Ensembl ENCODE dbSUPER 0.4 +12.0 11972 2.3 ATF1 NFIB ARID4B DMAP1 RAD21 ZNF48 ZSCAN9 RARA ZNF335 SCRT2 C22orf31 ZNRF3-AS1 ZNRF3-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNRF3-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNRF3-IT1 Gene

Chromosome:
22
Start:
28,992,721 bp from pter
End:
29,018,620 bp from pter
Size:
25,900 bases
Orientation:
Plus strand

Genomic View for ZNRF3-IT1 Gene

Genes around ZNRF3-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNRF3-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNRF3-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ZNRF3-IT1 Gene

Proteins for ZNRF3-IT1 Gene

Post-translational modifications for ZNRF3-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNRF3-IT1 Gene

Domains & Families for ZNRF3-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNRF3-IT1 Gene

Function for ZNRF3-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNRF3-IT1 Gene

Localization for ZNRF3-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNRF3-IT1 Gene

Pathways & Interactions for ZNRF3-IT1 Gene

SuperPathways for ZNRF3-IT1 Gene

No Data Available

Interacting Proteins for ZNRF3-IT1 Gene

Gene Ontology (GO) - Biological Process for ZNRF3-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNRF3-IT1 Gene

Drugs & Compounds for ZNRF3-IT1 Gene

No Compound Related Data Available

Transcripts for ZNRF3-IT1 Gene

mRNA/cDNA for ZNRF3-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNRF3-IT1 Gene

No ASD Table

Relevant External Links for ZNRF3-IT1 Gene

GeneLoc Exon Structure for
ZNRF3-IT1
ECgene alternative splicing isoforms for
ZNRF3-IT1

Expression for ZNRF3-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNRF3-IT1 Gene

genes like me logo Genes that share expression patterns with ZNRF3-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNRF3-IT1 Gene

Orthologs for ZNRF3-IT1 Gene

Evolution for ZNRF3-IT1 Gene

ENSEMBL:
Gene Tree for ZNRF3-IT1 (if available)
TreeFam:
Gene Tree for ZNRF3-IT1 (if available)

No data available for Orthologs for ZNRF3-IT1 Gene

Paralogs for ZNRF3-IT1 Gene

No data available for Paralogs for ZNRF3-IT1 Gene

Variants for ZNRF3-IT1 Gene

Relevant External Links for ZNRF3-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNRF3-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNRF3-IT1 Gene

Disorders for ZNRF3-IT1 Gene

No disorders were found for ZNRF3-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNRF3-IT1 Gene

Publications for ZNRF3-IT1 Gene

No publications were found for ZNRF3-IT1 Gene.

Products for ZNRF3-IT1 Gene

Sources for ZNRF3-IT1 Gene

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