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Aliases for ZNRF2P2 Gene

Aliases for ZNRF2P2 Gene

  • Zinc And Ring Finger 2 Pseudogene 2 2 3 5

External Ids for ZNRF2P2 Gene

Previous GeneCards Identifiers for ZNRF2P2 Gene

  • GC07M029726
  • GC07M029728
  • GC07M029743
  • GC07M029640

Summaries for ZNRF2P2 Gene

GeneCards Summary for ZNRF2P2 Gene

ZNRF2P2 (Zinc And Ring Finger 2 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNRF2P2 Gene

Genomics for ZNRF2P2 Gene

Regulatory Elements for ZNRF2P2 Gene

Enhancers for ZNRF2P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G030593 1.4 ENCODE dbSUPER 15.9 -910.3 -910333 5.6 MLX CREB3L1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 ZNF610 NBN ENSG00000196295 ENSG00000226874 ZNRF2P2 DKFZP586I1420 ENSG00000244480 FKBP14 ENSG00000264520 CRHR2 PIR57163
GH07G029684 1 ENCODE 19.7 +0.6 562 2.0 HDGF PKNOX1 CREB3L1 SIN3A KLF13 ZNF263 MCM3 REST PBX2 MXD3 ZNRF2P2 FKBP14 DPY19L2P3 ENSG00000264520 ENSG00000223813 PRR15 LOC646762
GH07G029605 1.5 Ensembl ENCODE dbSUPER 4.6 +77.8 77780 5.2 HDGF ATF1 PKNOX1 ARNT ZNF133 SIN3A YBX1 TCF12 ZNF766 GATA2 PRR15 ENSG00000223813 DPY19L2P3 ZNRF2P2 TMSB4XP3
GH07G029595 1.1 ENCODE dbSUPER 4.8 +87.6 87634 4.5 ELF3 FOXA2 PKNOX1 RAD21 RARA SCRT2 ZNF654 ZBTB2 REST ZNF843 PRR15 ENSG00000223813 ZNRF2P2 TMSB4XP3
GH07G029619 0.8 ENCODE 4.7 +65.9 65862 0.2 BCOR ZNF146 HINFP DDX20 BACH1 ZNF175 PYGO2 IRF9 ZNF766 ZNF584 PRR15 ENSG00000223813 ZNRF2P2 TMSB4XP3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNRF2P2 on UCSC Golden Path with GeneCards custom track

Promoters for ZNRF2P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000210267 721 2201 HDGF PKNOX1 CREB3L1 SIN3A KLF13 ZNF263 MCM3 REST PBX2 CTCF

Genomic Location for ZNRF2P2 Gene

Chromosome:
7
Start:
29,598,795 bp from pter
End:
29,685,821 bp from pter
Size:
87,027 bases
Orientation:
Minus strand

Genomic View for ZNRF2P2 Gene

Genes around ZNRF2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNRF2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNRF2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNRF2P2 Gene

Proteins for ZNRF2P2 Gene

Post-translational modifications for ZNRF2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNRF2P2 Gene

Domains & Families for ZNRF2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNRF2P2 Gene

Function for ZNRF2P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNRF2P2 Gene

Localization for ZNRF2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNRF2P2 Gene

Pathways & Interactions for ZNRF2P2 Gene

SuperPathways for ZNRF2P2 Gene

No Data Available

Interacting Proteins for ZNRF2P2 Gene

Gene Ontology (GO) - Biological Process for ZNRF2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNRF2P2 Gene

Drugs & Compounds for ZNRF2P2 Gene

No Compound Related Data Available

Transcripts for ZNRF2P2 Gene

mRNA/cDNA for ZNRF2P2 Gene

(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNRF2P2 Gene

Zinc and ring finger 2 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNRF2P2 Gene

No ASD Table

Relevant External Links for ZNRF2P2 Gene

GeneLoc Exon Structure for
ZNRF2P2
ECgene alternative splicing isoforms for
ZNRF2P2

Expression for ZNRF2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNRF2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNRF2P2 Gene:

ZNRF2P2

SOURCE GeneReport for Unigene cluster for ZNRF2P2 Gene:

Hs.729709
genes like me logo Genes that share expression patterns with ZNRF2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNRF2P2 Gene

Orthologs for ZNRF2P2 Gene

Evolution for ZNRF2P2 Gene

ENSEMBL:
Gene Tree for ZNRF2P2 (if available)
TreeFam:
Gene Tree for ZNRF2P2 (if available)

No data available for Orthologs for ZNRF2P2 Gene

Paralogs for ZNRF2P2 Gene

No data available for Paralogs for ZNRF2P2 Gene

Variants for ZNRF2P2 Gene

Sequence variations from dbSNP and Humsavar for ZNRF2P2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000561299 -- 29,685,045(+) GGGCC(A/C/G)GGAAC nc-transcript-variant, upstream-variant-2KB
rs1001183054 -- 29,685,186(+) TGGCG(C/T)TCATG nc-transcript-variant, upstream-variant-2KB
rs1002059331 -- 29,684,818(+) GATCA(A/C)CAGGA nc-transcript-variant, upstream-variant-2KB
rs1002408695 -- 29,684,603(+) AGGTG(G/T)TACGT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1002573292 -- 29,687,098(+) ATTTT(A/T)CTATA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNRF2P2 Gene

Variant ID Type Subtype PubMed ID
dgv11249n54 CNV gain 21841781
dgv235n111 CNV duplication 26073780
dgv6313n100 CNV gain 25217958
dgv6314n100 CNV gain 25217958
dgv6315n100 CNV loss 25217958
esv24568 CNV gain+loss 19812545
esv2734186 CNV deletion 23290073
esv2759521 CNV gain 17122850
esv3576300 CNV gain 25503493
esv3612697 CNV loss 21293372
esv3612698 CNV gain 21293372
nsv1068321 OTHER inversion 25765185
nsv1144168 CNV deletion 24896259
nsv1148830 OTHER inversion 26484159
nsv469585 CNV gain 16826518
nsv516270 CNV gain+loss 19592680
nsv606486 CNV loss 21841781
nsv8072 CNV gain+loss 18304495
nsv824045 CNV gain 20364138
nsv830935 CNV gain 17160897

Relevant External Links for ZNRF2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNRF2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNRF2P2 Gene

Disorders for ZNRF2P2 Gene

Relevant External Links for ZNRF2P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNRF2P2

No disorders were found for ZNRF2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNRF2P2 Gene

Publications for ZNRF2P2 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for ZNRF2P2 Gene

Sources for ZNRF2P2 Gene

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