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Aliases for ZNRF2P2 Gene

Aliases for ZNRF2P2 Gene

  • Zinc And Ring Finger 2 Pseudogene 2 2 3 5

External Ids for ZNRF2P2 Gene

Previous GeneCards Identifiers for ZNRF2P2 Gene

  • GC07M029726
  • GC07M029728
  • GC07M029743
  • GC07M029640

Summaries for ZNRF2P2 Gene

GeneCards Summary for ZNRF2P2 Gene

ZNRF2P2 (Zinc And Ring Finger 2 Pseudogene 2) is a Pseudogene.

Additional gene information for ZNRF2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNRF2P2 Gene

Genomics for ZNRF2P2 Gene

GeneHancer (GH) Regulatory Elements for ZNRF2P2 Gene

Promoters and enhancers for ZNRF2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I029684 Promoter/Enhancer 1.4 Ensembl ENCODE 569.6 +0.7 689 2.3 HDAC1 PKNOX1 RB1 SIN3A ZNF335 HCFC1 REST ZNF398 ELF1 ZEB2 ZNRF2P2 LOC646762 ENSG00000223813 DPY19L2P3 FKBP14 ENSG00000264520 PLEKHA8 PRR15 MIR550A3
GH07I030593 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 15.8 -910.3 -910333 5.6 CLOCK MLX ZFP64 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF263 SP3 ENSG00000196295 GC07M030589 GARS ZNRF2P2 ENSG00000244480 FKBP14 ENSG00000264520 PLEKHA8 CRHR2 PIR57163
GH07I029449 Enhancer 0.8 ENCODE 10.7 +235.7 235689 1 ELF3 CLOCK FOXA2 MLX RARA SLC30A9 FOS CREM MIXL1 HMG20B ZNRF2P2 PRR15 ENSG00000223813 GC07M029201 GC07P029212 CHN2
GH07I029605 Enhancer 1.3 Ensembl ENCODE dbSUPER 4.6 +77.8 77780 5.2 PKNOX1 ATF1 ZNF133 TCF12 GATA2 ZNF143 FOS DEK SMARCA4 HMBOX1 PRR15 ENSG00000223813 DPY19L2P3 ZNRF2P2 TMSB4XP3
GH07I029619 Enhancer 0.7 ENCODE 4.7 +65.9 65861 0.2 BACH1 PYGO2 ZBTB40 IRF9 ZNF766 RFX1 CAVIN1 NR4A1 GTF2A2 ZNF354B PRR15 PLEKHA8 ENSG00000264520 FKBP14 ENSG00000223813 ENSG00000226874 ZNRF2P2 TMSB4XP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNRF2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNRF2P2 Gene

Genomic Locations for ZNRF2P2 Gene
chr7:29,598,795-29,685,821
(GRCh38/hg38)
Size:
87,027 bases
Orientation:
Minus strand
chr7:29,638,411-29,725,437
(GRCh37/hg19)

Genomic View for ZNRF2P2 Gene

Genes around ZNRF2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNRF2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNRF2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNRF2P2 Gene

Proteins for ZNRF2P2 Gene

Post-translational modifications for ZNRF2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNRF2P2 Gene

Domains & Families for ZNRF2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNRF2P2 Gene

Function for ZNRF2P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNRF2P2 Gene

Localization for ZNRF2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNRF2P2 Gene

Pathways & Interactions for ZNRF2P2 Gene

SuperPathways for ZNRF2P2 Gene

No Data Available

Interacting Proteins for ZNRF2P2 Gene

Gene Ontology (GO) - Biological Process for ZNRF2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNRF2P2 Gene

Drugs & Compounds for ZNRF2P2 Gene

No Compound Related Data Available

Transcripts for ZNRF2P2 Gene

mRNA/cDNA for ZNRF2P2 Gene

(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNRF2P2 Gene

Zinc and ring finger 2 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNRF2P2 Gene

No ASD Table

Relevant External Links for ZNRF2P2 Gene

GeneLoc Exon Structure for
ZNRF2P2
ECgene alternative splicing isoforms for
ZNRF2P2

Expression for ZNRF2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNRF2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNRF2P2 Gene:

ZNRF2P2

SOURCE GeneReport for Unigene cluster for ZNRF2P2 Gene:

Hs.729709
genes like me logo Genes that share expression patterns with ZNRF2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNRF2P2 Gene

Orthologs for ZNRF2P2 Gene

Evolution for ZNRF2P2 Gene

ENSEMBL:
Gene Tree for ZNRF2P2 (if available)
TreeFam:
Gene Tree for ZNRF2P2 (if available)

No data available for Orthologs for ZNRF2P2 Gene

Paralogs for ZNRF2P2 Gene

No data available for Paralogs for ZNRF2P2 Gene

Variants for ZNRF2P2 Gene

Sequence variations from dbSNP and Humsavar for ZNRF2P2 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000561299 -- 29,685,045(-) G/A/C non_coding_transcript_variant
rs1001183054 -- 29,685,186(-) C/T non_coding_transcript_variant
rs1002059331 -- 29,684,818(-) C/A non_coding_transcript_variant
rs1002408695 -- 29,684,603(-) T/G downstream_transcript_variant
rs1002573292 -- 29,687,098(-) T/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNRF2P2 Gene

Variant ID Type Subtype PubMed ID
dgv11249n54 CNV gain 21841781
dgv235n111 CNV duplication 26073780
dgv6313n100 CNV gain 25217958
dgv6314n100 CNV gain 25217958
dgv6315n100 CNV loss 25217958
esv24568 CNV gain+loss 19812545
esv2734186 CNV deletion 23290073
esv2759521 CNV gain 17122850
esv3576300 CNV gain 25503493
esv3612697 CNV loss 21293372
esv3612698 CNV gain 21293372
nsv1068321 OTHER inversion 25765185
nsv1144168 CNV deletion 24896259
nsv1148830 OTHER inversion 26484159
nsv469585 CNV gain 16826518
nsv516270 CNV gain+loss 19592680
nsv606486 CNV loss 21841781
nsv8072 CNV gain+loss 18304495
nsv824045 CNV gain 20364138
nsv830935 CNV gain 17160897

Additional Variant Information for ZNRF2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNRF2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNRF2P2 Gene

Disorders for ZNRF2P2 Gene

Additional Disease Information for ZNRF2P2

No disorders were found for ZNRF2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNRF2P2 Gene

Publications for ZNRF2P2 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for ZNRF2P2 Gene

Sources for ZNRF2P2 Gene

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