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ZNF90P1 Gene(Pseudogene)

Zinc Finger Protein 90 Pseudogene 1

GCID:
GC03P101357
GIFtS:
12
Genes Participants
UDN Logo

Aliases for ZNF90P1 Gene

Subcategory (RNA class) for ZNF90P1 Gene

antisense

Aliases for ZNF90P1 Gene

  • Zinc Finger Protein 90 Pseudogene 1 2 3 5
  • Zinc Finger Protein 108, Pseudogene 2 3
  • Zinc Finger Protein 108 (Y9) 2 3
  • ZNF108P 3
  • ZNF108 3

External Ids for ZNF90P1 Gene

ORGUL Members for ZNF90P1 Gene

Previous HGNC Symbols for ZNF90P1 Gene

  • ZNF108
  • ZNF108P

Previous GeneCards Identifiers for ZNF90P1 Gene

  • GC03P101078

Summaries for ZNF90P1 Gene

GeneCards Summary for ZNF90P1 Gene

ZNF90P1 (Zinc Finger Protein 90 Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for ZNF90P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF90P1 Gene

Genomics for ZNF90P1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for ZNF90P1 Gene

Promoters and enhancers for ZNF90P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH03I101683 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 19 +328.5 328512 5.2 PKNOX1 SMAD1 ARNT ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 YY1 RPL24 LOC105374013 GC03P101686 ZBTB11-AS1 SENP7 RPS18P5 ZNF90P1 ZBTB11 TFG PDCL3P4
GH03I101723 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 +368.0 368002 3 PKNOX1 ATF1 ARNT ARID4B SIN3A FEZF1 DMAP1 YY1 NCOA2 ETS1 CEP97 ZBTB11-AS1 NXPE3 ZNF90P1
GH03I101867 Enhancer 1.3 Ensembl ENCODE dbSUPER 12.7 +511.2 511222 2 HDAC1 ATF1 FOXA2 PKNOX1 RAD21 YY1 TCF12 ZNF121 GATA2 RCOR1 SENP7 ZBTB11-AS1 ZNF90P1 ZPLD1 GC03P101864 GC03M101929
GH03I102161 Enhancer 1.3 Ensembl ENCODE dbSUPER 9.8 +805.8 805825 2.7 PKNOX1 CLOCK FEZF1 ZNF2 ZNF213 FOS RXRA REST ZNF488 SREBF1 LOC101929411 ZPLD1 SENP7 ZNF90P1 GC03M102109
GH03I102067 Enhancer 0.9 Ensembl ENCODE dbSUPER 12.7 +711.6 711613 2.4 JUND PRDM6 POLR2A ZNF548 FOS SENP7 ZNF90P1 ZPLD1 ZBTB11-AS1 ENSG00000241280
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF90P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF90P1 Gene

Genomic Locations for ZNF90P1 Gene
chr3:101,357,292-101,359,242
(GRCh38/hg38)
Size:
1,951 bases
Orientation:
Plus strand
chr3:101,076,136-101,078,086
(GRCh37/hg19)

Genomic View for ZNF90P1 Gene

Genes around ZNF90P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF90P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF90P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ZNF90P1 Gene

Proteins for ZNF90P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ZNF90P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF90P1 Gene

Domains & Families for ZNF90P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF90P1 Gene

Function for ZNF90P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF90P1 Gene

Localization for ZNF90P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF90P1 Gene

Pathways & Interactions for ZNF90P1 Gene

SuperPathways for ZNF90P1 Gene

PathCards logo More details on SuperPathways for ZNF90P1
No Data Available

Interacting Proteins for ZNF90P1 Gene

Gene Ontology (GO) - Biological Process for ZNF90P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF90P1 Gene

Drugs & Compounds for ZNF90P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ZNF90P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ZNF90P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF90P1 Gene

No ASD Table

Relevant External Links for ZNF90P1 Gene

GeneLoc Exon Structure for
ZNF90P1
ECgene alternative splicing isoforms for
ZNF90P1

Expression for ZNF90P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF90P1 Gene

mRNA expression in normal human tissues for ZNF90P1 Gene
mRNA expression by GTEx for ZNF90P1 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF90P1 Gene

This gene is overexpressed in Whole Blood (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of ZNF90P1 Gene:

ZNF90P1
genes like me logo Genes that share expression patterns with ZNF90P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF90P1 Gene

Orthologs for ZNF90P1 Gene

Evolution for ZNF90P1 Gene

ENSEMBL:
Gene Tree for ZNF90P1 (if available)
TreeFam:
Gene Tree for ZNF90P1 (if available)

No data available for Orthologs for ZNF90P1 Gene

Paralogs for ZNF90P1 Gene

No data available for Paralogs for ZNF90P1 Gene

Variants for ZNF90P1 Gene

Additional Variant Information for ZNF90P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF90P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF90P1 Gene

Disorders for ZNF90P1 Gene

No disorders were found for ZNF90P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF90P1 Gene

Publications for ZNF90P1 Gene

  1. Clustered organization of homologous KRAB zinc-finger genes with enhanced expression in human T lymphoid cells. (PMID: 8467795) Bellefroid EJ … Szpirer C (The EMBO journal 1993) 2 3 58

Products for ZNF90P1 Gene

Sources for ZNF90P1 Gene

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