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Aliases for ZNF883 Gene

Aliases for ZNF883 Gene

  • Zinc Finger Protein 883 2 3 5

External Ids for ZNF883 Gene

Previous GeneCards Identifiers for ZNF883 Gene

  • GC09M115760
  • GC09M085357

Summaries for ZNF883 Gene

GeneCards Summary for ZNF883 Gene

ZNF883 (Zinc Finger Protein 883) is a Protein Coding gene.

UniProtKB/Swiss-Prot for ZNF883 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF883 Gene

Genomics for ZNF883 Gene

Regulatory Elements for ZNF883 Gene

Enhancers for ZNF883 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F113138 1.3 FANTOM5 ENCODE 2.1 -89.5 -89491 1.7 ELF3 ATF1 MLX ARID4B THRB ZNF48 ZSCAN9 RARA GATA4 MIXL1 FAM225B ALAD ZNF883 SLC31A2 PIR44474
GH09F112747 1.1 FANTOM5 ENCODE 1.4 +302.8 302797 0.4 SOX13 GATAD2A SOX5 HMG20B SAP130 CEBPB CEBPG ZNF644 MIER3 RBAK INIP SNX30 KIAA1958 ZFP37 ZNF883
GH09F113056 0.4 ENCODE 0.4 -6.7 -6668 1.4 ATF1 ARID4B SIN3A ZNF48 ZNF2 ETS1 YY1 ELK1 CBX5 ZNF143 ZFP37 ZNF883
GH09F113011 0.8 ENCODE 0.3 +37.6 37633 0.8 ELF3 ATF1 CREB3L1 ZNF76 DMAP1 ZNF48 ZSCAN9 ZNF2 ETS1 ZNF366 PRPF4 CDC26 PIR31639 ZNF883
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF883 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF883 Gene

Chromosome:
9
Start:
112,997,120 bp from pter
End:
113,050,043 bp from pter
Size:
52,924 bases
Orientation:
Minus strand

Genomic View for ZNF883 Gene

Genes around ZNF883 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF883 Gene

Proteins for ZNF883 Gene

  • Protein details for ZNF883 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CG24-ZN883_HUMAN
    Recommended name:
    Zinc finger protein 883
    Protein Accession:
    P0CG24

    Protein attributes for ZNF883 Gene

    Size:
    379 amino acids
    Molecular mass:
    43967 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF883 Gene

Post-translational modifications for ZNF883 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF883 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF883 Gene

Domains & Families for ZNF883 Gene

Gene Families for ZNF883 Gene

Protein Domains for ZNF883 Gene

Suggested Antigen Peptide Sequences for ZNF883 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0CG24

UniProtKB/Swiss-Prot:

ZN883_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 13 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 13 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF883: view

Function for ZNF883 Gene

Molecular function for ZNF883 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF883 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 transcription factor activity, sequence-specific DNA binding IBA --
GO:0004364 glutathione transferase activity IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF883: view

Phenotypes for ZNF883 Gene

genes like me logo Genes that share phenotypes with ZNF883: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF883 Gene

Localization for ZNF883 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF883 Gene

Gene Ontology (GO) - Cellular Components for ZNF883 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF883: view

No data available for Subcellular locations from COMPARTMENTS for ZNF883 Gene

Pathways & Interactions for ZNF883 Gene

SuperPathways for ZNF883 Gene

No Data Available

Interacting Proteins for ZNF883 Gene

Gene Ontology (GO) - Biological Process for ZNF883 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF883: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF883 Gene

Transcripts for ZNF883 Gene

mRNA/cDNA for ZNF883 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(46) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF883 Gene

Zinc finger protein 883:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF883 Gene

No ASD Table

Relevant External Links for ZNF883 Gene

GeneLoc Exon Structure for
ZNF883
ECgene alternative splicing isoforms for
ZNF883

Expression for ZNF883 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF883 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF883 Gene:

ZNF883

SOURCE GeneReport for Unigene cluster for ZNF883 Gene:

Hs.192877
genes like me logo Genes that share expression patterns with ZNF883: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF883 Gene

Orthologs for ZNF883 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ZNF883 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF883 34
  • 98.42 (n)
Species where no ortholog for ZNF883 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF883 Gene

ENSEMBL:
Gene Tree for ZNF883 (if available)
TreeFam:
Gene Tree for ZNF883 (if available)

Paralogs for ZNF883 Gene

(533) SIMAP similar genes for ZNF883 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF883: view

No data available for Paralogs for ZNF883 Gene

Variants for ZNF883 Gene

Sequence variations from dbSNP and Humsavar for ZNF883 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10124395 -- 113,006,295(+) TTCCA(A/G)GAGCA intron-variant
rs10513176 -- 112,998,941(+) AATCT(G/T)GATAT utr-variant-5-prime
rs10635459 -- 113,003,952(+) CCTAA(-/CCT)CAGTA intron-variant
rs10739384 -- 113,010,673(+) ATATA(A/C)AATTT intron-variant
rs10759617 -- 113,004,674(+) ACTAT(A/G)AGAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF883 Gene

Variant ID Type Subtype PubMed ID
dgv7703n100 CNV loss 25217958
esv2759710 CNV gain 17122850
esv3891712 CNV loss 25118596
nsv1161899 CNV deletion 26073780
nsv466490 CNV loss 19166990
nsv466491 CNV loss 19166990
nsv615201 CNV loss 21841781
nsv615203 CNV loss 21841781
nsv825050 CNV gain 20364138
nsv831691 CNV loss 17160897

Relevant External Links for ZNF883 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF883

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF883 Gene

Disorders for ZNF883 Gene

Relevant External Links for ZNF883

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF883

No disorders were found for ZNF883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF883 Gene

Publications for ZNF883 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4 64

Products for ZNF883 Gene

Sources for ZNF883 Gene

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