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Aliases for ZNF883 Gene

Aliases for ZNF883 Gene

  • Zinc Finger Protein 883 2 3 5

External Ids for ZNF883 Gene

Previous GeneCards Identifiers for ZNF883 Gene

  • GC09M115760
  • GC09M085357
  • GC09M112997

Summaries for ZNF883 Gene

GeneCards Summary for ZNF883 Gene

ZNF883 (Zinc Finger Protein 883) is a Protein Coding gene. An important paralog of this gene is ZNF135.

UniProtKB/Swiss-Prot for ZNF883 Gene

  • May be involved in transcriptional regulation.

Additional gene information for ZNF883 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF883 Gene

Genomics for ZNF883 Gene

GeneHancer (GH) Regulatory Elements for ZNF883 Gene

Promoters and enhancers for ZNF883 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I113138 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 2.1 -89.5 -89491 1.7 ELF3 FOXA2 MLX ARID4B THRB ZNF48 ZSCAN9 RARA FOS THAP11 FAM225B ALAD ZNF883 SLC31A2 PIR44474
GH09I112747 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 1.4 +302.8 302797 0.4 SOX5 SOX13 GATAD2A HMG20B SAP130 CEBPB CEBPG ZNF644 NFIL3 MIER3 INIP SNX30 KIAA1958 ZFP37 ZNF883
GH09I113055 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -6.6 -6563 1.6 ATF1 FOXA2 ARID4B SIN3A ZNF2 ZNF48 YY1 ETS1 ZNF766 ZNF143 ZFP37 ZNF883
GH09I113011 Enhancer 1.1 Ensembl ENCODE 0.3 +37.8 37827 1.2 ATF1 FOXA2 DMAP1 ZNF2 ZNF48 ETS1 ZNF416 ZNF143 ZNF548 ATF7 PRPF4 ZFP37 CDC26 ZNF618 PIR31639 ZNF883
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF883 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF883 Gene

Genomic Locations for ZNF883 Gene
chr9:112,957,722-113,050,043
(GRCh38/hg38)
Size:
92,322 bases
Orientation:
Minus strand
chr9:115,759,400-115,774,507
(GRCh37/hg19)

Genomic View for ZNF883 Gene

Genes around ZNF883 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF883 Gene

Proteins for ZNF883 Gene

  • Protein details for ZNF883 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CG24-ZN883_HUMAN
    Recommended name:
    Zinc finger protein 883
    Protein Accession:
    P0CG24

    Protein attributes for ZNF883 Gene

    Size:
    379 amino acids
    Molecular mass:
    43967 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF883 Gene

Post-translational modifications for ZNF883 Gene

No Post-translational modifications

Other Protein References for ZNF883 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF883 Gene

Domains & Families for ZNF883 Gene

Gene Families for ZNF883 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Transcription factors

Protein Domains for ZNF883 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ZNF883 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0CG24

UniProtKB/Swiss-Prot:

ZN883_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF883: view

Function for ZNF883 Gene

Molecular function for ZNF883 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF883 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF883: view

Phenotypes for ZNF883 Gene

genes like me logo Genes that share phenotypes with ZNF883: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF883 Gene

Localization for ZNF883 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF883 Gene

Gene Ontology (GO) - Cellular Components for ZNF883 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF883: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ZNF883 Gene

Pathways & Interactions for ZNF883 Gene

SuperPathways for ZNF883 Gene

No Data Available

Interacting Proteins for ZNF883 Gene

Gene Ontology (GO) - Biological Process for ZNF883 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF883: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF883 Gene

Drugs & Compounds for ZNF883 Gene

No Compound Related Data Available

Transcripts for ZNF883 Gene

mRNA/cDNA for ZNF883 Gene

Unigene Clusters for ZNF883 Gene

Zinc finger protein 883:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF883 Gene

No ASD Table

Relevant External Links for ZNF883 Gene

GeneLoc Exon Structure for
ZNF883
ECgene alternative splicing isoforms for
ZNF883

Expression for ZNF883 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF883 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF883 Gene:

ZNF883

SOURCE GeneReport for Unigene cluster for ZNF883 Gene:

Hs.192877
genes like me logo Genes that share expression patterns with ZNF883: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF883 Gene

Orthologs for ZNF883 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ZNF883 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF883 33
  • 98.42 (n)
Species where no ortholog for ZNF883 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF883 Gene

ENSEMBL:
Gene Tree for ZNF883 (if available)
TreeFam:
Gene Tree for ZNF883 (if available)

Paralogs for ZNF883 Gene

(533) SIMAP similar genes for ZNF883 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF883: view

Variants for ZNF883 Gene

Sequence variations from dbSNP and Humsavar for ZNF883 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000218416 -- 113,001,884(-) T/G intron_variant
rs1000307922 -- 113,007,048(-) G/A intron_variant
rs1000438649 -- 113,007,270(-) T/C intron_variant
rs1000611395 -- 113,000,073(-) C/G intron_variant
rs1000786555 -- 113,012,678(-) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF883 Gene

Variant ID Type Subtype PubMed ID
dgv7703n100 CNV loss 25217958
esv2759710 CNV gain 17122850
esv3891712 CNV loss 25118596
nsv1161899 CNV deletion 26073780
nsv466490 CNV loss 19166990
nsv466491 CNV loss 19166990
nsv615201 CNV loss 21841781
nsv615203 CNV loss 21841781
nsv825050 CNV gain 20364138
nsv831691 CNV loss 17160897

Additional Variant Information for ZNF883 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF883

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF883 Gene

Disorders for ZNF883 Gene

Additional Disease Information for ZNF883

No disorders were found for ZNF883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF883 Gene

Publications for ZNF883 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray SJ … Dunham I (Nature 2004) 3 4 58

Products for ZNF883 Gene

Sources for ZNF883 Gene

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