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Aliases for ZNF876P Gene

Aliases for ZNF876P Gene

  • Zinc Finger Protein 876, Pseudogene 2 3 5

External Ids for ZNF876P Gene

Summaries for ZNF876P Gene

GeneCards Summary for ZNF876P Gene

ZNF876P (Zinc Finger Protein 876, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for ZNF876P Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF876P Gene

Genomics for ZNF876P Gene

Regulatory Elements for ZNF876P Gene

Enhancers for ZNF876P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F001009 0.5 ENCODE 13.4 +797.8 797755 2.0 HDGF PKNOX1 ZNF48 GLIS2 FOS ZNF263 SP3 SP5 ZNF610 SMARCA4 LOC100129917 ZNF141 CRIPAK ZNF718 ZNF876P CTBP1-AS2 ZNF732 LOC100288172 ABCA11P IDUA
GH04F001019 0.9 ENCODE 13.4 +806.9 806857 0.0 RING1 HIC1 GLIS2 GLIS1 LOC100129917 ZNF141 ZNF718 ZNF876P CTBP1-AS2 ZNF732 LOC100288172 ABCA11P IDUA TMEM129
GH04F001040 1.6 FANTOM5 Ensembl ENCODE 13.4 +829.3 829296 1.8 RING1 SOX13 CTCF KLF1 SAP130 ZIC2 ZFHX2 NR2F6 TRIM24 E2F6 CRIPAK LOC100129917 ZNF141 CTBP1-AS2 ZNF718 ZNF876P ZNF732 LOC100288172 ABCA11P IDUA
GH04F000212 0.5 ENCODE 0.8 +0.2 219 1.6 PKNOX1 CREB3L1 TSC22D4 YBX1 POLR2H POLR2A TARDBP PBX2 ZFX ZNF718 PDE6B ZNF876P GC04P000228 GC04P000229 GC04P000230 PIR59219
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF876P on UCSC Golden Path with GeneCards custom track

Promoters for ZNF876P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001428668 501 1800 PKNOX1 CREB3L1 TSC22D4 YBX1 POLR2H POLR2A TARDBP PBX2 ZFX

Genomic Location for ZNF876P Gene

Chromosome:
4
Start:
212,600 bp from pter
End:
255,985 bp from pter
Size:
43,386 bases
Orientation:
Plus strand

Genomic View for ZNF876P Gene

Genes around ZNF876P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF876P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF876P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF876P Gene

Proteins for ZNF876P Gene

  • Protein details for ZNF876P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q49A33-Z876P_HUMAN
    Recommended name:
    Putative zinc finger protein 876
    Protein Accession:
    Q49A33

    Protein attributes for ZNF876P Gene

    Size:
    203 amino acids
    Molecular mass:
    23384 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF876P Gene

Post-translational modifications for ZNF876P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF876P Gene

Domains & Families for ZNF876P Gene

Protein Domains for ZNF876P Gene

Suggested Antigen Peptide Sequences for ZNF876P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q49A33

UniProtKB/Swiss-Prot:

Z876P_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 5 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 5 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF876P: view

No data available for Gene Families for ZNF876P Gene

Function for ZNF876P Gene

Molecular function for ZNF876P Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF876P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF876P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF876P Gene

Localization for ZNF876P Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF876P Gene

Gene Ontology (GO) - Cellular Components for ZNF876P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
genes like me logo Genes that share ontologies with ZNF876P: view

No data available for Subcellular locations from COMPARTMENTS for ZNF876P Gene

Pathways & Interactions for ZNF876P Gene

SuperPathways for ZNF876P Gene

No Data Available

Interacting Proteins for ZNF876P Gene

Gene Ontology (GO) - Biological Process for ZNF876P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF876P: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF876P Gene

Transcripts for ZNF876P Gene

mRNA/cDNA for ZNF876P Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF876P Gene

Zinc finger protein 876, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF876P Gene

No ASD Table

Relevant External Links for ZNF876P Gene

GeneLoc Exon Structure for
ZNF876P
ECgene alternative splicing isoforms for
ZNF876P

Expression for ZNF876P Gene

mRNA expression in normal human tissues for ZNF876P Gene

mRNA differential expression in normal tissues according to GTEx for ZNF876P Gene

This gene is overexpressed in Testis (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of ZNF876P Gene:

ZNF876P

SOURCE GeneReport for Unigene cluster for ZNF876P Gene:

Hs.673877
genes like me logo Genes that share expression patterns with ZNF876P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF876P Gene

Orthologs for ZNF876P Gene

Evolution for ZNF876P Gene

ENSEMBL:
Gene Tree for ZNF876P (if available)
TreeFam:
Gene Tree for ZNF876P (if available)

No data available for Orthologs for ZNF876P Gene

Paralogs for ZNF876P Gene

(370) SIMAP similar genes for ZNF876P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF876P: view

No data available for Paralogs for ZNF876P Gene

Variants for ZNF876P Gene

Sequence variations from dbSNP and Humsavar for ZNF876P Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10000645 -- 214,680(+) tccac(A/T)tttca intron-variant
rs10002898 -- 255,059(+) cgcag(G/T)ggctc nc-transcript-variant
rs10009823 -- 239,975(+) CTCAT(C/G)AGAGC intron-variant
rs10013794 -- 238,891(+) TGATA(C/T)AATCC intron-variant
rs10028482 -- 254,036(+) TGTCA(A/G)AATCT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF876P Gene

Variant ID Type Subtype PubMed ID
dgv2697n106 CNV deletion 24896259
dgv5065n100 CNV loss 25217958
dgv5074n100 CNV loss 25217958
dgv914e199 CNV deletion 23128226
esv2456521 CNV deletion 19546169
esv2668834 CNV deletion 23128226
esv2671630 CNV deletion 23128226
esv2678209 CNV deletion 23128226
esv2762402 CNV loss 21179565
esv2763816 CNV gain+loss 21179565
esv33512 CNV gain 17666407
esv3355 OTHER sequence alteration 18987735
esv3599359 CNV gain 21293372
esv3599360 CNV loss 21293372
esv3599361 CNV loss 21293372
esv3599362 CNV loss 21293372
esv3893860 CNV loss 25118596
esv3893862 CNV gain 25118596
esv4769 OTHER complex 18987735
nsv1001533 CNV gain 25217958
nsv1001899 CNV loss 25217958
nsv1011039 CNV loss 25217958
nsv1074123 CNV deletion 25765185
nsv1150471 CNV deletion 26484159
nsv469996 CNV gain 18288195
nsv593190 CNV gain 21841781
nsv593197 CNV gain 21841781
nsv829833 CNV gain 17160897
nsv980175 CNV duplication 23825009

Relevant External Links for ZNF876P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF876P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF876P Gene

Disorders for ZNF876P Gene

Relevant External Links for ZNF876P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF876P

No disorders were found for ZNF876P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF876P Gene

Publications for ZNF876P Gene

  1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF876P Gene

Sources for ZNF876P Gene

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