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Aliases for ZNF876P Gene

Aliases for ZNF876P Gene

  • Zinc Finger Protein 876, Pseudogene 2 3

External Ids for ZNF876P Gene

Summaries for ZNF876P Gene

GeneCards Summary for ZNF876P Gene

ZNF876P (Zinc Finger Protein 876, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for ZNF876P Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF876P Gene

Genomics for ZNF876P Gene

Genomic Location for ZNF876P Gene

Start:
212,600 bp from pter
End:
255,985 bp from pter
Size:
43,386 bases
Orientation:
Plus strand

Genomic View for ZNF876P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF876P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF876P Gene

No data available for Regulatory Elements for ZNF876P Gene

Proteins for ZNF876P Gene

  • Protein details for ZNF876P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q49A33-Z876P_HUMAN
    Recommended name:
    Putative zinc finger protein 876
    Protein Accession:
    Q49A33
    Secondary Accessions:

    Protein attributes for ZNF876P Gene

    Size:
    203 amino acids
    Molecular mass:
    23384 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF876P Gene

Proteomics data for ZNF876P Gene at MOPED

Post-translational modifications for ZNF876P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF876P Gene

Domains for ZNF876P Gene

Protein Domains for ZNF876P Gene

Suggested Antigen Peptide Sequences for ZNF876P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q49A33

UniProtKB/Swiss-Prot:

Z876P_HUMAN :
  • Q49A33
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 5 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF876P: view

No data available for Gene Families for ZNF876P Gene

Function for ZNF876P Gene

Molecular function for ZNF876P Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF876P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF876P: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF876P Gene

Localization for ZNF876P Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF876P Gene

Gene Ontology (GO) - Cellular Components for ZNF876P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF876P: view

No data available for Subcellular locations from COMPARTMENTS for ZNF876P Gene

Pathways for ZNF876P Gene

SuperPathways for ZNF876P Gene

No Data Available

Interacting Proteins for ZNF876P Gene

Gene Ontology (GO) - Biological Process for ZNF876P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF876P: view

No data available for Pathways by source for ZNF876P Gene

Transcripts for ZNF876P Gene

mRNA/cDNA for ZNF876P Gene

(3) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF876P Gene

Zinc finger protein 876, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF876P Gene

No ASD Table

Relevant External Links for ZNF876P Gene

GeneLoc Exon Structure for
ZNF876P
ECgene alternative splicing isoforms for
ZNF876P

Expression for ZNF876P Gene

mRNA expression in normal human tissues for ZNF876P Gene

mRNA differential expression in normal tissues according to GTEx for ZNF876P Gene

This gene is overexpressed in Testis (4.3).

SOURCE GeneReport for Unigene cluster for ZNF876P Gene Hs.673877

genes like me logo Genes that share expressions with ZNF876P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ZNF876P Gene

Orthologs for ZNF876P Gene

Evolution for ZNF876P Gene

ENSEMBL:
Gene Tree for ZNF876P (if available)
TreeFam:
Gene Tree for ZNF876P (if available)

No data available for Orthologs for ZNF876P Gene

Paralogs for ZNF876P Gene

Selected SIMAP similar genes for ZNF876P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF876P: view

No data available for Paralogs for ZNF876P Gene

Variants for ZNF876P Gene

Sequence variations from dbSNP and Humsavar for ZNF876P Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs1578898 -- 235,130(-) gcata(A/G)taaaa intron-variant
rs1986386 -- 235,020(-) ATCAA(A/G)GGTTT intron-variant
rs2353603 -- 217,759(+) ATTAA(C/T)AGGAG intron-variant
rs2353605 -- 225,749(+) actta(C/T)tattt intron-variant
rs2883228 -- 234,676(+) ctgca(C/T)gcaca intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF876P Gene

Variant ID Type Subtype PubMed ID
esv33512 CNV Gain 17666407
nsv878233 CNV Gain 21882294
dgv5384n71 CNV Loss 21882294
nsv878236 CNV Loss 21882294
dgv5385n71 CNV Gain 21882294
esv2456521 CNV Deletion 19546169
esv3355 CNV Duplication 18987735
nsv829833 CNV Gain 17160897
dgv914e199 CNV Deletion 23128226
esv2668834 CNV Deletion 23128226
dgv5386n71 CNV Gain 21882294
esv2678209 CNV Deletion 23128226
esv4769 CNV Complex 18987735
nsv878244 CNV Loss 21882294
nsv469996 CNV Gain 18288195
esv2671630 CNV Deletion 23128226

Relevant External Links for ZNF876P Gene

HapMap Linkage Disequilibrium report
ZNF876P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF876P Gene

Disorders for ZNF876P Gene

No disorders were found for ZNF876P Gene.

No data available for UniProtKB/Swiss-Prot for ZNF876P Gene

Publications for ZNF876P Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ZNF876P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF876P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF876P
    • Block miRNA regulation of ZNF876P using miScript Target Protectors

    Sources for ZNF876P Gene

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