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Aliases for ZNF853 Gene

Aliases for ZNF853 Gene

  • Zinc Finger Protein 853 2 3

External Ids for ZNF853 Gene

Previous GeneCards Identifiers for ZNF853 Gene

  • GC07P006649
  • GC07P006621
  • GC07P006656
  • GC07P006657
  • GC07P006661

Summaries for ZNF853 Gene

GeneCards Summary for ZNF853 Gene

ZNF853 (Zinc Finger Protein 853) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZFP42.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF853 Gene

Genomics for ZNF853 Gene

Regulatory Elements for ZNF853 Gene

Genomic Location for ZNF853 Gene

Start:
6,615,617 bp from pter
End:
6,624,290 bp from pter
Size:
8,674 bases
Orientation:
Plus strand

Genomic View for ZNF853 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF853 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF853 Gene

Proteins for ZNF853 Gene

  • Protein details for ZNF853 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CG23-ZN853_HUMAN
    Recommended name:
    Zinc finger protein 853
    Protein Accession:
    P0CG23
    Secondary Accessions:

    Protein attributes for ZNF853 Gene

    Size:
    659 amino acids
    Molecular mass:
    74878 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF853 Gene

Proteomics data for ZNF853 Gene at MOPED

Post-translational modifications for ZNF853 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF853 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF853 Gene

Domains for ZNF853 Gene

Gene Families for ZNF853 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF853 Gene

Suggested Antigen Peptide Sequences for ZNF853 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0CG23

UniProtKB/Swiss-Prot:

ZN853_HUMAN :
  • P0CG23
Similarity:
  • Contains 5 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF853: view

Function for ZNF853 Gene

Gene Ontology (GO) - Molecular Function for ZNF853 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF853: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF853 Gene

Localization for ZNF853 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF853 Gene

Pathways for ZNF853 Gene

SuperPathways for ZNF853 Gene

No Data Available

Interacting Proteins for ZNF853 Gene

Gene Ontology (GO) - Biological Process for ZNF853 Gene

None

No data available for Pathways by source for ZNF853 Gene

Transcripts for ZNF853 Gene

mRNA/cDNA for ZNF853 Gene

(54) Selected AceView cDNA sequences:
(2) Additional mRNA sequences :
(3) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF853 Gene

Zinc finger protein 853:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF853

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ZNF853
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF853 Gene

No ASD Table

Relevant External Links for ZNF853 Gene

GeneLoc Exon Structure for
ZNF853
ECgene alternative splicing isoforms for
ZNF853

Expression for ZNF853 Gene

mRNA expression in normal human tissues for ZNF853 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF853 Gene

SOURCE GeneReport for Unigene cluster for ZNF853 Gene Hs.592170

genes like me logo Genes that share expressions with ZNF853: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF853 Gene

Orthologs for ZNF853 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF853 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia ZNF853 36
  • 45 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp853 16
Zfp853 36
  • 39 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 13 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii ZNF787 36
  • 31 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta pho 36
  • 7 (a)
ManyToMany
phol 36
  • 7 (a)
ManyToMany
Species with no ortholog for ZNF853:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF853 Gene

ENSEMBL:
Gene Tree for ZNF853 (if available)
TreeFam:
Gene Tree for ZNF853 (if available)

Paralogs for ZNF853 Gene

Paralogs for ZNF853 Gene

genes like me logo Genes that share paralogs with ZNF853: view

Variants for ZNF853 Gene

Sequence variations from dbSNP and Humsavar for ZNF853 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs879670 -- 6,624,590(+) CCttt(C/T)tttct downstream-variant-500B
rs879671 -- 6,624,614(+) agagg(G/T)tcttg downstream-variant-500B
rs883719 -- 6,616,573(+) TATAA(A/G)AAAAC intron-variant
rs940871 -- 6,624,039(+) ACCAA(A/G)TCGTC utr-variant-3-prime
rs940872 -- 6,620,945(+) TGCCC(C/T)TGCAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF853 Gene

Variant ID Type Subtype PubMed ID
nsv436904 CNV Insertion 17901297
nsv7392 OTHER Inversion 18451855
esv1914954 OTHER Inversion 16254605
nsv830895 CNV Loss 17160897
dgv7147n71 CNV Loss 21882294
nsv508444 CNV Loss 20534489
nsv515978 CNV Loss 19592680
dgv7148n71 CNV Loss 21882294
dgv7149n71 CNV Loss 21882294
dgv1090n67 CNV Gain 20364138
dgv7150n71 CNV Loss 21882294

Relevant External Links for ZNF853 Gene

HapMap Linkage Disequilibrium report
ZNF853

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF853 Gene

Disorders for ZNF853 Gene

No disorders were found for ZNF853 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF853 Gene

Publications for ZNF853 Gene

  1. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4
  2. A quantitative atlas of mitotic phosphorylation. (PMID: 18669648) Dephoure N. … Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2008) 3

Products for ZNF853 Gene

Sources for ZNF853 Gene

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