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Aliases for ZNF843 Gene

Aliases for ZNF843 Gene

  • Zinc Finger Protein 843 2 3 5

External Ids for ZNF843 Gene

Previous GeneCards Identifiers for ZNF843 Gene

  • GC16M031355
  • GC16M029007

Summaries for ZNF843 Gene

GeneCards Summary for ZNF843 Gene

ZNF843 (Zinc Finger Protein 843) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF843 Gene

Genomics for ZNF843 Gene

Regulatory Elements for ZNF843 Gene

Enhancers for ZNF843 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F031451 0.2 ENCODE 12.9 -10.7 -10703 4.7 HDGF PKNOX1 ARNT ARID4B DMAP1 ZNF2 YY1 ZNF143 FOS PAF1 LOC105371171 ZNF843 CLUHP3 HERC2P4 ZNF785 ARMC5 ENSG00000261474
GH16F031456 1.1 ENCODE 10.8 -15.7 -15669 4.9 HDGF CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ENSG00000260267 ENSG00000260304 ZNF764 LOC105371171 ZNF720 BCL7C ZNF785 CTF1 ENSG00000261474 ZNF747
GH16F031427 0.5 ENCODE 6.9 +13.8 13751 4.5 HDGF ATF1 CREB3L1 SIN3A DMAP1 ZNF2 ZNF48 YY1 ZNF143 ZNF548 ZNF747 LOC105371171 ZNF785 ENSG00000260267 MIR762HG ENSG00000260304 ZNF720 ARMC5 PYDC1 PRSS8
GH16F031403 0.6 Ensembl 6.7 +39.5 39460 0.2 ZNF263 ZNF600 EGR2 COX6A2 PRSS8 ARMC5 PRSS36 PYCARD STX4 STX1B ZNF843 ENSG00000260757 ENSG00000277543
GH16F031483 0.6 Ensembl ENCODE 6.3 -41.7 -41652 1.7 ELF3 MLX ARID4B DMAP1 RAD21 RARA MIXL1 EGR2 THAP11 KLF11 LOC105371171 ZNF843 ITGAD SLC5A2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF843 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF843 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000665298 459 1400 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143

Genomic Location for ZNF843 Gene

Chromosome:
16
Start:
31,432,593 bp from pter
End:
31,443,160 bp from pter
Size:
10,568 bases
Orientation:
Minus strand

Genomic View for ZNF843 Gene

Genes around ZNF843 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF843 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF843 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF843 Gene

Proteins for ZNF843 Gene

  • Protein details for ZNF843 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N446-ZN843_HUMAN
    Recommended name:
    Zinc finger protein 843
    Protein Accession:
    Q8N446
    Secondary Accessions:
    • A8K4U8

    Protein attributes for ZNF843 Gene

    Size:
    348 amino acids
    Molecular mass:
    37065 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF843 Gene

Post-translational modifications for ZNF843 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF843 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF843 Gene

Domains & Families for ZNF843 Gene

Gene Families for ZNF843 Gene

Protein Domains for ZNF843 Gene

Suggested Antigen Peptide Sequences for ZNF843 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N446

UniProtKB/Swiss-Prot:

ZN843_HUMAN :
  • Contains 2 C2H2-type zinc fingers.
Similarity:
  • Contains 2 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF843: view

Function for ZNF843 Gene

Gene Ontology (GO) - Molecular Function for ZNF843 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0005515 protein binding IPI 22939624
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF843: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF843 Gene

Localization for ZNF843 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF843 Gene COMPARTMENTS Subcellular localization image for ZNF843 gene
Compartment Confidence
nucleus 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ZNF843 Gene

Pathways & Interactions for ZNF843 Gene

SuperPathways for ZNF843 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF843 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF843 Gene

Transcripts for ZNF843 Gene

mRNA/cDNA for ZNF843 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(246) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF843 Gene

Zinc finger protein 843:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF843 Gene

No ASD Table

Relevant External Links for ZNF843 Gene

GeneLoc Exon Structure for
ZNF843
ECgene alternative splicing isoforms for
ZNF843

Expression for ZNF843 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF843 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

NURSA nuclear receptor signaling pathways regulating expression of ZNF843 Gene:

ZNF843

SOURCE GeneReport for Unigene cluster for ZNF843 Gene:

Hs.722243
genes like me logo Genes that share expression patterns with ZNF843: view

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF843 Gene

Orthologs for ZNF843 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ZNF843 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF843 34
  • 99.23 (n)
Species where no ortholog for ZNF843 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF843 Gene

ENSEMBL:
Gene Tree for ZNF843 (if available)
TreeFam:
Gene Tree for ZNF843 (if available)

Paralogs for ZNF843 Gene

genes like me logo Genes that share paralogs with ZNF843: view

No data available for Paralogs for ZNF843 Gene

Variants for ZNF843 Gene

Sequence variations from dbSNP and Humsavar for ZNF843 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs10595905 -- 31,441,686(+) ATCTC(-/ATT)GTTGC intron-variant
rs111247321 -- 31,437,297(+) TCCTT(C/T)TTTTT intron-variant
rs111441615 -- 31,435,650(+) AAAAA(C/T)AAACA utr-variant-3-prime
rs112584636 -- 31,444,490(+) CTATC(A/T)CCCAG upstream-variant-2KB
rs112661084 -- 31,444,561(+) TTCTC(A/G)TGCCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF843 Gene

Variant ID Type Subtype PubMed ID
nsv1066280 CNV gain 25217958
nsv833194 CNV loss 17160897

Variation tolerance for ZNF843 Gene

Gene Damage Index Score: 4.37; 63.47% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF843 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF843

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF843 Gene

Disorders for ZNF843 Gene

Relevant External Links for ZNF843

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF843

No disorders were found for ZNF843 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF843 Gene

Publications for ZNF843 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  2. A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways. (PMID: 25036637) Taipale M. … Lindquist S. (Cell 2014) 3 64
  3. Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition. (PMID: 22939624) Taipale M. … Lindquist S. (Cell 2012) 3 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64

Products for ZNF843 Gene

Sources for ZNF843 Gene

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