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Aliases for ZNF840P Gene

Aliases for ZNF840P Gene

  • Zinc Finger Protein 840, Pseudogene 2 3 5
  • C20orf157 3 4
  • ZNF840 3 4
  • Chromosome 20 Open Reading Frame 157 2
  • Zinc Finger Protein 135 Pseudogene 3
  • Zinc Finger Protein 840 Pseudogene 4
  • Putative Zinc Finger Protein 840 3
  • Zinc Finger Protein 840 2
  • DJ981L23.3 3

External Ids for ZNF840P Gene

Previous HGNC Symbols for ZNF840P Gene

  • C20orf157
  • ZNF840

Previous GeneCards Identifiers for ZNF840P Gene

  • GC20P044526
  • GC20P045092

Summaries for ZNF840P Gene

GeneCards Summary for ZNF840P Gene

ZNF840P (Zinc Finger Protein 840, Pseudogene) is a Pseudogene. Among its related pathways are Gene Expression.

UniProtKB/Swiss-Prot for ZNF840P Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF840P Gene

Genomics for ZNF840P Gene

Regulatory Elements for ZNF840P Gene

Enhancers for ZNF840P Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ZNF840P on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF840P Gene

Chromosome:
20
Start:
46,484,461 bp from pter
End:
46,492,640 bp from pter
Size:
8,180 bases
Orientation:
Plus strand

Genomic View for ZNF840P Gene

Genes around ZNF840P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF840P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF840P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF840P Gene

Proteins for ZNF840P Gene

  • Protein details for ZNF840P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NDX5-ZN840_HUMAN
    Recommended name:
    Putative zinc finger protein 840
    Protein Accession:
    A6NDX5
    Secondary Accessions:
    • Q6KAL7

    Protein attributes for ZNF840P Gene

    Size:
    716 amino acids
    Molecular mass:
    83235 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF840P Gene

Proteomics data for ZNF840P Gene at MOPED

Post-translational modifications for ZNF840P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF840P Gene

Domains & Families for ZNF840P Gene

Protein Domains for ZNF840P Gene

Suggested Antigen Peptide Sequences for ZNF840P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NDX5

UniProtKB/Swiss-Prot:

ZN840_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 18 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 18 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF840P: view

No data available for Gene Families for ZNF840P Gene

Function for ZNF840P Gene

Molecular function for ZNF840P Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF840P Gene

Localization for ZNF840P Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF840P Gene

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF840P Gene

Pathways & Interactions for ZNF840P Gene

SuperPathways for ZNF840P Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF840P: view

Pathways by source for ZNF840P Gene

2 Reactome pathways for ZNF840P Gene

Interacting Proteins for ZNF840P Gene

Gene Ontology (GO) - Biological Process for ZNF840P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF840P: view

No data available for SIGNOR curated interactions for ZNF840P Gene

Drugs & Compounds for ZNF840P Gene

No Compound Related Data Available

Transcripts for ZNF840P Gene

mRNA/cDNA for ZNF840P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF840P Gene

No ASD Table

Relevant External Links for ZNF840P Gene

GeneLoc Exon Structure for
ZNF840P
ECgene alternative splicing isoforms for
ZNF840P

Expression for ZNF840P Gene

mRNA expression in normal human tissues for ZNF840P Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF840P Gene



genes like me logo Genes that share expression patterns with ZNF840P: view

Protein tissue co-expression partners for ZNF840P Gene

- Elite partner

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF840P Gene

Orthologs for ZNF840P Gene

Evolution for ZNF840P Gene

ENSEMBL:
Gene Tree for ZNF840P (if available)
TreeFam:
Gene Tree for ZNF840P (if available)

No data available for Orthologs for ZNF840P Gene

Paralogs for ZNF840P Gene

No data available for Paralogs for ZNF840P Gene

Variants for ZNF840P Gene

Sequence variations from dbSNP and Humsavar for ZNF840P Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
VAR_048027 -

Relevant External Links for ZNF840P Gene

HapMap Linkage Disequilibrium report
ZNF840P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF840P Gene

Disorders for ZNF840P Gene

No disorders were found for ZNF840P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF840P Gene

Publications for ZNF840P Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4 67
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for ZNF840P Gene

Sources for ZNF840P Gene

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