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Aliases for ZNF836 Gene

Aliases for ZNF836 Gene

  • Zinc Finger Protein 836 2 3

External Ids for ZNF836 Gene

Summaries for ZNF836 Gene

GeneCards Summary for ZNF836 Gene

ZNF836 (Zinc Finger Protein 836) is a Protein Coding gene. An important paralog of this gene is ZNF268.

UniProtKB/Swiss-Prot for ZNF836 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF836 Gene

Genomics for ZNF836 Gene

Genomic Location for ZNF836 Gene

Start:
52,153,864 bp from pter
End:
52,171,643 bp from pter
Size:
17,780 bases
Orientation:
Minus strand

Genomic View for ZNF836 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF836 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF836 Gene

Regulatory Elements for ZNF836 Gene

Proteins for ZNF836 Gene

  • Protein details for ZNF836 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZNA1-ZN836_HUMAN
    Recommended name:
    Zinc finger protein 836
    Protein Accession:
    Q6ZNA1
    Secondary Accessions:

    Protein attributes for ZNF836 Gene

    Size:
    936 amino acids
    Molecular mass:
    107717 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF836 Gene

Proteomics data for ZNF836 Gene at MOPED

Post-translational modifications for ZNF836 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF836 Gene

No data available for DME Specific Peptides for ZNF836 Gene

Domains for ZNF836 Gene

Gene Families for ZNF836 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

UniProtKB/Swiss-Prot:

ZN836_HUMAN
Domain:
  • Contains 1 KRAB domain.:
    • Q6ZNA1
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q6ZNA1
Similarity:
  • Contains 25 C2H2-type zinc fingers.:
    • Q6ZNA1
genes like me logo Genes that share domains with ZNF836: view

Function for ZNF836 Gene

Molecular function for ZNF836 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF836 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF836: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF836 Gene

Localization for ZNF836 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF836 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF836 Gene COMPARTMENTS Subcellular localization image for ZNF836 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF836 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF836: view

Pathways for ZNF836 Gene

SuperPathways for ZNF836 Gene

No Data Available

Interacting Proteins for ZNF836 Gene

Gene Ontology (GO) - Biological Process for ZNF836 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF836: view

No data available for Pathways by source for ZNF836 Gene

Transcripts for ZNF836 Gene

Unigene Clusters for ZNF836 Gene

Zinc finger protein 836:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF836 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c ^ 6a · 6b ^ 7a · 7b · 7c · 7d
SP1: - - -
SP2: - - - -
SP3: - -
SP4: - - -
SP5: - - - - - -
SP6:

Relevant External Links for ZNF836 Gene

GeneLoc Exon Structure for
ZNF836
ECgene alternative splicing isoforms for
ZNF836

Expression for ZNF836 Gene

mRNA expression in normal human tissues for ZNF836 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF836 Gene

SOURCE GeneReport for Unigene cluster for ZNF836 Gene Hs.631584

genes like me logo Genes that share expressions with ZNF836: view

Orthologs for ZNF836 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF836 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 55 (a)
ManyToMany
ZNF836 36
  • 97.63 (n)
  • 96.63 (a)
cow
(Bos Taurus)
Mammalia -- 37
  • 54 (a)
ManyToMany
-- 37
  • 46 (a)
ManyToMany
-- 37
  • 52 (a)
ManyToMany
-- 37
  • 51 (a)
ManyToMany
-- 37
  • 51 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Zfp945 37
  • 39 (a)
ManyToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC101734875 36
  • 54.58 (n)
  • 50 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 41 (a)
ManyToMany
-- 37
  • 35 (a)
ManyToMany
-- 37
  • 47 (a)
ManyToMany
-- 37
  • 42 (a)
ManyToMany
-- 37
  • 45 (a)
ManyToMany
CSA.1668 37
  • 38 (a)
ManyToMany
Species with no ortholog for ZNF836:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF836 Gene

ENSEMBL:
Gene Tree for ZNF836 (if available)
TreeFam:
Gene Tree for ZNF836 (if available)

Paralogs for ZNF836 Gene

Selected SIMAP similar genes for ZNF836 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZNF836: view

Variants for ZNF836 Gene

Sequence variations from dbSNP and Humsavar for ZNF836 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs919268 -- 52,168,645(-) AGATA(A/T)GTATA intron-variant
rs919270 -- 52,165,300(-) ATCTT(C/T)ACCAC intron-variant
rs919271 -- 52,165,161(-) GTGAT(C/T)ATAAA intron-variant
rs919272 -- 52,165,116(-) CTTAC(A/G)TTTTC intron-variant
rs1366245 - 52,157,026(-) TATAT(A/G)TGTAA missense, reference

Structural Variations from Database of Genomic Variants (DGV) for ZNF836 Gene

Variant ID Type Subtype PubMed ID
esv2718780 CNV Deletion 23290073
nsv817856 CNV Gain 17921354

Relevant External Links for ZNF836 Gene

HapMap Linkage Disequilibrium report
ZNF836

Disorders for ZNF836 Gene

No disorders were found for ZNF836 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF836 Gene

Publications for ZNF836 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition. (PMID: 22505724) Udeshi N.D. … Carr S.A. (Mol. Cell Proteomics 2012) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4

Products for ZNF836 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF836
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF836
    • Block miRNA regulation of ZNF836 using miScript Target Protectors

    Sources for ZNF836 Gene

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