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Aliases for ZNF835 Gene

Aliases for ZNF835 Gene

  • Zinc Finger Protein 835 2 3
  • BC37295_3 3

External Ids for ZNF835 Gene

Previous GeneCards Identifiers for ZNF835 Gene

  • GC19M061868
  • GC19M057174
  • GC19M053484

Summaries for ZNF835 Gene

GeneCards Summary for ZNF835 Gene

ZNF835 (Zinc Finger Protein 835) is a Protein Coding gene. An important paralog of this gene is ZNF10.

UniProtKB/Swiss-Prot for ZNF835 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF835 Gene

Genomics for ZNF835 Gene

Regulatory Elements for ZNF835 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF835 Gene

Start:
56,661,981 bp from pter
End:
56,671,783 bp from pter
Size:
9,803 bases
Orientation:
Minus strand

Genomic View for ZNF835 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF835 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF835 Gene

Proteins for ZNF835 Gene

  • Protein details for ZNF835 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y2P0-ZN835_HUMAN
    Recommended name:
    Zinc finger protein 835
    Protein Accession:
    Q9Y2P0
    Secondary Accessions:
    • B7Z5Y0
    • G3V1S0

    Protein attributes for ZNF835 Gene

    Size:
    537 amino acids
    Molecular mass:
    59631 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAD23609.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for ZNF835 Gene

Proteomics data for ZNF835 Gene at MOPED

Post-translational modifications for ZNF835 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF835 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF835 Gene

Domains for ZNF835 Gene

Gene Families for ZNF835 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF835 Gene

Suggested Antigen Peptide Sequences for ZNF835 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9Y2P0

UniProtKB/Swiss-Prot:

ZN835_HUMAN :
  • Q9Y2P0
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 14 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF835: view

Function for ZNF835 Gene

Molecular function for ZNF835 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF835 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF835: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF835 Gene

Localization for ZNF835 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF835 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF835 Gene COMPARTMENTS Subcellular localization image for ZNF835 gene
Compartment Confidence
nucleus 4

Gene Ontology (GO) - Cellular Components for ZNF835 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF835: view

Pathways for ZNF835 Gene

SuperPathways for ZNF835 Gene

No Data Available

Interacting Proteins for ZNF835 Gene

Gene Ontology (GO) - Biological Process for ZNF835 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF835: view

No data available for Pathways by source for ZNF835 Gene

Transcripts for ZNF835 Gene

mRNA/cDNA for ZNF835 Gene

(3) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF835 Gene

Zinc finger protein 835:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF835

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ZNF835
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF835 Gene

No ASD Table

Relevant External Links for ZNF835 Gene

GeneLoc Exon Structure for
ZNF835
ECgene alternative splicing isoforms for
ZNF835

Expression for ZNF835 Gene

mRNA expression in normal human tissues for ZNF835 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF835 Gene

SOURCE GeneReport for Unigene cluster for ZNF835 Gene Hs.458438

genes like me logo Genes that share expressions with ZNF835: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF835 Gene

Orthologs for ZNF835 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF835 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF835 35
  • 99.57 (n)
  • 99.44 (a)
ZNF835 36
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 35 (a)
ManyToMany
-- 36
  • 34 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia ZNF835 35
  • 81.47 (n)
  • 78.21 (a)
ZNF835 36
  • 71 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 39 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 35 (a)
ManyToMany
chicken
(Gallus gallus)
Aves -- 36
  • 36 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 26 (a)
ManyToMany
Species with no ortholog for ZNF835:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF835 Gene

ENSEMBL:
Gene Tree for ZNF835 (if available)
TreeFam:
Gene Tree for ZNF835 (if available)

Paralogs for ZNF835 Gene

Selected SIMAP similar genes for ZNF835 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ZNF835: view

Variants for ZNF835 Gene

Sequence variations from dbSNP and Humsavar for ZNF835 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs3995 -- 56,665,884(+) actgA(C/T)TTAAT intron-variant
rs1861221 -- 56,671,549(+) CACAC(C/T)TGCAG intron-variant, utr-variant-5-prime
rs4327158 -- 56,666,157(+) TTGCC(C/T)AGGCT intron-variant
rs4801352 -- 56,662,214(+) CTCCC(C/T)GAGAA downstream-variant-500B
rs4801353 -- 56,669,301(+) CGACA(A/G)CCCCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF835 Gene

Variant ID Type Subtype PubMed ID
nsv912521 CNV Gain 21882294
esv2719042 CNV Deletion 23290073
esv2741485 CNV Deletion 23290073
esv22638 CNV Loss 19812545
dgv587e201 CNV Deletion 23290073
esv2719043 CNV Deletion 23290073
esv2719045 CNV Deletion 23290073

Relevant External Links for ZNF835 Gene

HapMap Linkage Disequilibrium report
ZNF835

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF835 Gene

Disorders for ZNF835 Gene

No disorders were found for ZNF835 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF835 Gene

Publications for ZNF835 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4

Products for ZNF835 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF835
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF835
    • Block miRNA regulation of ZNF835 using miScript Target Protectors

    Sources for ZNF835 Gene

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