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Aliases for ZNF835 Gene

Aliases for ZNF835 Gene

  • Zinc Finger Protein 835 2 3 5
  • BC37295_3 3

External Ids for ZNF835 Gene

Previous GeneCards Identifiers for ZNF835 Gene

  • GC19M061868
  • GC19M057174
  • GC19M053484

Summaries for ZNF835 Gene

GeneCards Summary for ZNF835 Gene

ZNF835 (Zinc Finger Protein 835) is a Protein Coding gene. GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding.

UniProtKB/Swiss-Prot for ZNF835 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF835 Gene

Genomics for ZNF835 Gene

Regulatory Elements for ZNF835 Gene

Promoters for ZNF835 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZNF835 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF835 Gene

Chromosome:
19
Start:
56,661,981 bp from pter
End:
56,671,783 bp from pter
Size:
9,803 bases
Orientation:
Minus strand

Genomic View for ZNF835 Gene

Genes around ZNF835 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF835 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF835 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF835 Gene

Proteins for ZNF835 Gene

  • Protein details for ZNF835 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y2P0-ZN835_HUMAN
    Recommended name:
    Zinc finger protein 835
    Protein Accession:
    Q9Y2P0
    Secondary Accessions:
    • B7Z5Y0
    • G3V1S0

    Protein attributes for ZNF835 Gene

    Size:
    537 amino acids
    Molecular mass:
    59631 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAD23609.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for ZNF835 Gene

Proteomics data for ZNF835 Gene at MOPED

Post-translational modifications for ZNF835 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF835 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF835 Gene

Domains & Families for ZNF835 Gene

Gene Families for ZNF835 Gene

Protein Domains for ZNF835 Gene

Suggested Antigen Peptide Sequences for ZNF835 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9Y2P0

UniProtKB/Swiss-Prot:

ZN835_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 14 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 14 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF835: view

Function for ZNF835 Gene

Molecular function for ZNF835 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.
genes like me logo Genes that share phenotypes with ZNF835: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF835 Gene

Localization for ZNF835 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF835 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF835 Gene COMPARTMENTS Subcellular localization image for ZNF835 gene
Compartment Confidence
nucleus 5

No data available for Gene Ontology (GO) - Cellular Components for ZNF835 Gene

Pathways & Interactions for ZNF835 Gene

SuperPathways for ZNF835 Gene

No Data Available

Interacting Proteins for ZNF835 Gene

Gene Ontology (GO) - Biological Process for ZNF835 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF835 Gene

Drugs & Compounds for ZNF835 Gene

No Compound Related Data Available

Transcripts for ZNF835 Gene

mRNA/cDNA for ZNF835 Gene

(3) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF835 Gene

Zinc finger protein 835:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF835 Gene

No ASD Table

Relevant External Links for ZNF835 Gene

GeneLoc Exon Structure for
ZNF835
ECgene alternative splicing isoforms for
ZNF835

Expression for ZNF835 Gene

mRNA expression in normal human tissues for ZNF835 Gene

Protein differential expression in normal tissues from HIPED for ZNF835 Gene

This gene is overexpressed in Rectum (24.7), Urinary Bladder (20.2), and Adrenal (12.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZNF835 Gene



SOURCE GeneReport for Unigene cluster for ZNF835 Gene Hs.458438

genes like me logo Genes that share expression patterns with ZNF835: view

Protein tissue co-expression partners for ZNF835 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF835 Gene

Orthologs for ZNF835 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF835 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia ZNF835 35
  • 81.47 (n)
  • 78.21 (a)
ZNF835 36
  • 71 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ZNF835 35
  • 99.57 (n)
  • 99.44 (a)
ZNF835 36
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 35 (a)
ManyToMany
-- 36
  • 34 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 39 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 35 (a)
ManyToMany
chicken
(Gallus gallus)
Aves -- 36
  • 36 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 26 (a)
ManyToMany
Species with no ortholog for ZNF835:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF835 Gene

ENSEMBL:
Gene Tree for ZNF835 (if available)
TreeFam:
Gene Tree for ZNF835 (if available)

Paralogs for ZNF835 Gene

(500) SIMAP similar genes for ZNF835 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ZNF835: view

No data available for Paralogs for ZNF835 Gene

Variants for ZNF835 Gene

Sequence variations from dbSNP and Humsavar for ZNF835 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs12462469 - 56,665,114(+) GTTTT(C/T)CTGCA reference, missense
rs12460400 - 56,664,936(+) GGCTC(G/T)CCCCA reference, missense
rs3995 -- 56,665,884(+) actgA(C/T)TTAAT intron-variant
rs4327158 -- 56,666,157(+) TTGCC(C/T)AGGCT intron-variant
rs4801352 -- 56,662,214(+) CTCCC(C/T)GAGAA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for ZNF835 Gene

Variant ID Type Subtype PubMed ID
nsv912521 CNV Gain 21882294
esv2719042 CNV Deletion 23290073
esv2741485 CNV Deletion 23290073
esv22638 CNV Loss 19812545
dgv587e201 CNV Deletion 23290073
esv2719043 CNV Deletion 23290073
esv2719045 CNV Deletion 23290073

Variation tolerance for ZNF835 Gene

Residual Variation Intolerance Score: 49.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 11.15; 92.33% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF835 Gene

HapMap Linkage Disequilibrium report
ZNF835

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF835 Gene

Disorders for ZNF835 Gene

Relevant External Links for ZNF835

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF835

No disorders were found for ZNF835 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF835 Gene

Publications for ZNF835 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 67

Products for ZNF835 Gene

Sources for ZNF835 Gene

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