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Aliases for ZNF833P Gene

Aliases for ZNF833P Gene

  • Zinc Finger Protein 833, Pseudogene 2 3 5
  • ZNF833 3 4
  • Zinc Finger Protein Pseudogene 3
  • Zinc Finger Protein 833 2
  • CTC-499B15.5 3

External Ids for ZNF833P Gene

Previous HGNC Symbols for ZNF833P Gene

  • ZNF833

Previous GeneCards Identifiers for ZNF833P Gene

  • GC19P011751
  • GC19P011359
  • GC19P011639

Summaries for ZNF833P Gene

GeneCards Summary for ZNF833P Gene

ZNF833P (Zinc Finger Protein 833, Pseudogene) is a Pseudogene. GO annotations related to this gene include nucleic acid binding.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF833P Gene

Genomics for ZNF833P Gene

Regulatory Elements for ZNF833P Gene

Enhancers for ZNF833P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G011673 1.1 Ensembl ENCODE 0.7 0.0 -11 1.7 ELF3 CTCF SAP130 AGO1 TEAD4 ARID4B MAX ZNF384 RAD21 TEAD3 ZNF833P HNRNPA1P10
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF833P on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF833P Gene

Chromosome:
19
Start:
11,673,998 bp from pter
End:
11,686,569 bp from pter
Size:
12,572 bases
Orientation:
Plus strand

Genomic View for ZNF833P Gene

Genes around ZNF833P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF833P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF833P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF833P Gene

Proteins for ZNF833P Gene

  • Protein details for ZNF833P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZTB9-ZN833_HUMAN
    Recommended name:
    Putative zinc finger protein 833
    Protein Accession:
    Q6ZTB9
    Secondary Accessions:
    • B2RPA0

    Protein attributes for ZNF833P Gene

    Size:
    187 amino acids
    Molecular mass:
    21749 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF833P Gene

Post-translational modifications for ZNF833P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF833P Gene

Domains & Families for ZNF833P Gene

Protein Domains for ZNF833P Gene

Suggested Antigen Peptide Sequences for ZNF833P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZNF833P: view

No data available for Gene Families and UniProtKB/Swiss-Prot for ZNF833P Gene

Function for ZNF833P Gene

Gene Ontology (GO) - Molecular Function for ZNF833P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF833P: view

Phenotypes for ZNF833P Gene

GenomeRNAi human phenotypes for ZNF833P:
genes like me logo Genes that share phenotypes with ZNF833P: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF833P Gene

Localization for ZNF833P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF833P Gene

Pathways & Interactions for ZNF833P Gene

SuperPathways for ZNF833P Gene

No Data Available

Interacting Proteins for ZNF833P Gene

Gene Ontology (GO) - Biological Process for ZNF833P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF833P Gene

Drugs & Compounds for ZNF833P Gene

No Compound Related Data Available

Transcripts for ZNF833P Gene

mRNA/cDNA for ZNF833P Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(14) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF833P Gene

Zinc finger protein 833, pseudogene:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF833P Gene

No ASD Table

Relevant External Links for ZNF833P Gene

GeneLoc Exon Structure for
ZNF833P
ECgene alternative splicing isoforms for
ZNF833P

Expression for ZNF833P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF833P Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF833P Gene:

ZNF833P

SOURCE GeneReport for Unigene cluster for ZNF833P Gene:

Hs.672384
genes like me logo Genes that share expression patterns with ZNF833P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF833P Gene

Orthologs for ZNF833P Gene

Evolution for ZNF833P Gene

ENSEMBL:
Gene Tree for ZNF833P (if available)
TreeFam:
Gene Tree for ZNF833P (if available)

No data available for Orthologs for ZNF833P Gene

Paralogs for ZNF833P Gene

(536) SIMAP similar genes for ZNF833P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF833P: view

No data available for Paralogs for ZNF833P Gene

Variants for ZNF833P Gene

Sequence variations from dbSNP and Humsavar for ZNF833P Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000144153 -- 11,675,600(+) AAAAA(A/G)AAGAA intron-variant
rs1000239393 -- 11,675,219(+) AACTA(A/G)TCCCT intron-variant
rs1000334744 -- 11,674,995(+) GATGC(G/T)ACCTC intron-variant
rs1000455113 -- 11,674,278(+) CTCTG(G/T)GTTCT intron-variant
rs1000589913 -- 11,674,033(+) GCGCG(C/G)CATCT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF833P Gene

Variant ID Type Subtype PubMed ID
esv3643675 CNV loss 21293372
nsv509721 CNV insertion 20534489
nsv525966 CNV gain 19592680
nsv960788 CNV duplication 23825009

Relevant External Links for ZNF833P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF833P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF833P Gene

Disorders for ZNF833P Gene

Relevant External Links for ZNF833P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF833P

No disorders were found for ZNF833P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF833P Gene

Publications for ZNF833P Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF833P Gene

Sources for ZNF833P Gene

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