Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF83 Gene

Aliases for ZNF83 Gene

  • Zinc Finger Protein 83 2 3 5
  • Zinc Finger Protein 816B 2 3 4
  • Zinc Finger Protein HPF1 3 4
  • ZNF816B 3 4
  • Zinc Finger Protein 83 (HPF1) 2
  • HPF1 3

External Ids for ZNF83 Gene

Previous HGNC Symbols for ZNF83 Gene

  • ZNF816B

Previous GeneCards Identifiers for ZNF83 Gene

  • GC19M053746
  • GC19M053476
  • GC19M057773
  • GC19M057807
  • GC19M057189
  • GC19M053115
  • GC19M049446

Summaries for ZNF83 Gene

GeneCards Summary for ZNF83 Gene

ZNF83 (Zinc Finger Protein 83) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZNF160.

UniProtKB/Swiss-Prot for ZNF83 Gene

  • May be involved in transcriptional regulation.

Gene Wiki entry for ZNF83 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF83 Gene

Genomics for ZNF83 Gene

Regulatory Elements for ZNF83 Gene

Enhancers for ZNF83 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F052637 0.6 ENCODE 36.3 +52.4 52361 2.2 HDGF TBP HDAC1 CREB3L1 ARID4B SIN3A ZBTB40 SCRT2 CREM SP3 ZNF83 ZNF28 ENSG00000269825 ENSG00000268970
GH19F052647 0.2 ENCODE 20.2 +42.2 42189 1.8 YBX3 JUND POLR2A FOS SUPT5H TRIM28 ZNF83 ENSG00000269825 ENSG00000268970
GH19F052626 0.6 FANTOM5 17.7 +64.2 64192 0.2 ZNF83 ZNF611 ZNF766 ZNF160 ZNF616 ZNF808 ZNF701 ENSG00000268970 ENSG00000269825
GH19F052648 0.6 ENCODE 16 +43.4 43408 0.2 HDAC1 PKNOX1 CBX3 ESRRA HLF CEBPB NCOR1 CBX5 PBX2 TRIM24 ZNF83 ENSG00000269825 ENSG00000268970
GH19F052664 0.8 Ensembl ENCODE 13.3 +25.3 25315 2.3 BCOR PKNOX1 NFRKB ETV1 CHAMP1 IRF9 ZNF316 NCOR1 POLR2A NFE2 ZNF83 ENSG00000269825
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF83 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF83 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000348622 581 2801 HDGF ATF1 PKNOX1 ARNT SIN3A ZNF48 GLIS2 ZNF263 SP5 NCOA1

Genomic Location for ZNF83 Gene

Chromosome:
19
Start:
52,594,060 bp from pter
End:
52,690,581 bp from pter
Size:
96,522 bases
Orientation:
Minus strand

Genomic View for ZNF83 Gene

Genes around ZNF83 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF83 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF83 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF83 Gene

Proteins for ZNF83 Gene

  • Protein details for ZNF83 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P51522-ZNF83_HUMAN
    Recommended name:
    Zinc finger protein 83
    Protein Accession:
    P51522
    Secondary Accessions:
    • A8MT75
    • Q3ZCX0
    • Q6PI08

    Protein attributes for ZNF83 Gene

    Size:
    516 amino acids
    Molecular mass:
    59710 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF83 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF83 Gene

Post-translational modifications for ZNF83 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF83 Gene

Domains & Families for ZNF83 Gene

Gene Families for ZNF83 Gene

Protein Domains for ZNF83 Gene

Suggested Antigen Peptide Sequences for ZNF83 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P51522

UniProtKB/Swiss-Prot:

ZNF83_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 15 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 15 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF83: view

Function for ZNF83 Gene

Molecular function for ZNF83 Gene

GENATLAS Biochemistry:
zinc finger protein 83 (C2H2 type)
UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF83 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 transcription factor activity, sequence-specific DNA binding IBA --
GO:0005515 protein binding IPI 16237761
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF83: view
genes like me logo Genes that share phenotypes with ZNF83: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF83 Gene

Localization for ZNF83 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF83 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF83 Gene COMPARTMENTS Subcellular localization image for ZNF83 gene
Compartment Confidence
nucleus 5

Gene Ontology (GO) - Cellular Components for ZNF83 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF83: view

Pathways & Interactions for ZNF83 Gene

SuperPathways for ZNF83 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF83 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA,IBA --
genes like me logo Genes that share ontologies with ZNF83: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF83 Gene

Transcripts for ZNF83 Gene

Unigene Clusters for ZNF83 Gene

Zinc finger protein 83:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF83 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5a · 5b · 5c · 5d
SP1: - -
SP2:
SP3: - - - -
SP4: - - -

Relevant External Links for ZNF83 Gene

GeneLoc Exon Structure for
ZNF83
ECgene alternative splicing isoforms for
ZNF83

Expression for ZNF83 Gene

mRNA expression in normal human tissues for ZNF83 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF83 Gene:

ZNF83

SOURCE GeneReport for Unigene cluster for ZNF83 Gene:

Hs.467210
genes like me logo Genes that share expression patterns with ZNF83: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF83 Gene

Orthologs for ZNF83 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF83 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF83 35
  • 57 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 35
  • 43 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia -- 35
  • 41 (a)
ManyToMany
Species where no ortholog for ZNF83 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF83 Gene

ENSEMBL:
Gene Tree for ZNF83 (if available)
TreeFam:
Gene Tree for ZNF83 (if available)

Paralogs for ZNF83 Gene

Pseudogenes.org Pseudogenes for ZNF83 Gene

genes like me logo Genes that share paralogs with ZNF83: view

Variants for ZNF83 Gene

Sequence variations from dbSNP and Humsavar for ZNF83 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs575275768 untested 52,613,741(+) CAAGG(G/T)GTGAA intron-variant, reference, missense
rs1012531 -- 52,615,025(+) GTATA(A/C)AGAAA intron-variant
rs1012532 -- 52,615,301(+) tatta(C/T)gttat intron-variant
rs1012533 -- 52,615,633(+) TAAAA(C/T)AGAAA intron-variant
rs1015304 -- 52,617,918(-) ATCTG(C/T)AATGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF83 Gene

Variant ID Type Subtype PubMed ID
esv2094808 CNV deletion 18987734
esv2677925 CNV deletion 23128226
esv2718786 CNV deletion 23290073
esv2718787 CNV deletion 23290073
esv2718792 CNV deletion 23290073
esv2718793 CNV deletion 23290073
esv2718794 CNV deletion 23290073
esv2718796 CNV deletion 23290073
esv3583509 CNV loss 25503493
esv3644699 CNV loss 21293372
esv3644704 CNV loss 21293372
esv3644705 CNV gain 21293372
esv3644706 CNV loss 21293372
esv3644707 CNV gain 21293372
esv3644708 CNV loss 21293372
esv3644709 CNV gain 21293372
esv3644710 CNV loss 21293372
esv3644712 CNV gain 21293372
esv3893231 CNV loss 25118596
esv3893233 CNV loss 25118596
esv3893234 CNV gain 25118596
nsv1065584 CNV loss 25217958
nsv1066762 CNV gain 25217958
nsv1066876 CNV gain 25217958
nsv1072896 CNV deletion 25765185
nsv1078889 OTHER inversion 25765185
nsv1109211 CNV deletion 24896259
nsv1140479 CNV deletion 24896259
nsv1143408 CNV deletion 24896259
nsv1146332 OTHER inversion 26484159
nsv1153811 CNV deletion 26484159
nsv458744 CNV gain 19166990
nsv509752 CNV insertion 20534489
nsv519070 CNV loss 19592680
nsv522273 CNV loss 19592680
nsv527815 CNV loss 19592680
nsv580028 CNV gain 21841781
nsv580029 CNV loss 21841781
nsv817857 CNV gain 17921354
nsv828616 CNV gain 20364138
nsv833874 CNV loss 17160897
nsv961237 CNV duplication 23825009
nsv961238 CNV duplication 23825009

Variation tolerance for ZNF83 Gene

Residual Variation Intolerance Score: 64.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 10.51; 91.11% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF83 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF83

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF83 Gene

Disorders for ZNF83 Gene

Relevant External Links for ZNF83

Genetic Association Database (GAD)
ZNF83
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF83

No disorders were found for ZNF83 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF83 Gene

Publications for ZNF83 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. Assignment of the human ZNF83 (HPF1) zinc finger gene to chromosome 19q13.3-q13.4. (PMID: 8088807) Marine J.C. … Szpirer C. (Genomics 1994) 2 3 64
  3. The human genome contains hundreds of genes coding for finger proteins of the Kruppel type. (PMID: 2505992) Bellefroid E.J. … Martial J.A. (DNA 1989) 3 4 64
  4. A human MAP kinase interactome. (PMID: 20936779) Bandyopadhyay S. … Ideker T. (Nat. Methods 2010) 3 64
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for ZNF83 Gene

Sources for ZNF83 Gene

Content
Loading form....