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Aliases for ZNF829 Gene

Aliases for ZNF829 Gene

  • Zinc Finger Protein 829 2 3

External Ids for ZNF829 Gene

Previous GeneCards Identifiers for ZNF829 Gene

  • GC19M042074
  • GC19M037382
  • GC19M033848
  • GC19M037499

Summaries for ZNF829 Gene

GeneCards Summary for ZNF829 Gene

ZNF829 (Zinc Finger Protein 829) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZFP92.

UniProtKB/Swiss-Prot for ZNF829 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF829 Gene

Genomics for ZNF829 Gene

Regulatory Elements for ZNF829 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF829 Gene

Chromosome:
19
Start:
36,888,124 bp from pter
End:
36,916,387 bp from pter
Size:
28,264 bases
Orientation:
Minus strand

Genomic View for ZNF829 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF829 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF829 Gene

Proteins for ZNF829 Gene

  • Protein details for ZNF829 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q3KNS6-ZN829_HUMAN
    Recommended name:
    Zinc finger protein 829
    Protein Accession:
    Q3KNS6
    Secondary Accessions:
    • A0A075B6T0
    • Q3KNS7
    • Q6ZNN0
    • Q7Z657

    Protein attributes for ZNF829 Gene

    Size:
    432 amino acids
    Molecular mass:
    50142 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAD98083.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF829 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF829 Gene

Proteomics data for ZNF829 Gene at MOPED

Post-translational modifications for ZNF829 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF829 Gene

No data available for DME Specific Peptides for ZNF829 Gene

Domains & Families for ZNF829 Gene

Gene Families for ZNF829 Gene

Protein Domains for ZNF829 Gene

Suggested Antigen Peptide Sequences for ZNF829 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q3KNS6

UniProtKB/Swiss-Prot:

ZN829_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 10 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 10 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF829: view

Function for ZNF829 Gene

Molecular function for ZNF829 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF829 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF829: view

Phenotypes for ZNF829 Gene

GenomeRNAi human phenotypes for ZNF829:
genes like me logo Genes that share phenotypes with ZNF829: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF829

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF829 Gene

Localization for ZNF829 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF829 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF829 Gene COMPARTMENTS Subcellular localization image for ZNF829 gene
Compartment Confidence
nucleus 3

Gene Ontology (GO) - Cellular Components for ZNF829 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF829: view

Pathways & Interactions for ZNF829 Gene

SuperPathways for ZNF829 Gene

No Data Available

Interacting Proteins for ZNF829 Gene

Gene Ontology (GO) - Biological Process for ZNF829 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF829: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF829 Gene

Drugs & Compounds for ZNF829 Gene

No Compound Related Data Available

Transcripts for ZNF829 Gene

Unigene Clusters for ZNF829 Gene

Zinc finger protein 829:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF829

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF829 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9
SP1: -
SP2:
SP3:

Relevant External Links for ZNF829 Gene

GeneLoc Exon Structure for
ZNF829
ECgene alternative splicing isoforms for
ZNF829

Expression for ZNF829 Gene

mRNA expression in normal human tissues for ZNF829 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF829 Gene

This gene is overexpressed in Testis (x7.0).

SOURCE GeneReport for Unigene cluster for ZNF829 Gene Hs.720312

genes like me logo Genes that share expression patterns with ZNF829: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ZNF829 Gene

Orthologs for ZNF829 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ZNF829 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF829 35
  • 91.73 (n)
  • 89.78 (a)
ZNF829 36
  • 89 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ZNF829 35
  • 99.46 (n)
  • 99.07 (a)
ZNF829 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF829 36
  • 91 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 57 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes ZAP1 36
  • 12 (a)
OneToMany
Species with no ortholog for ZNF829:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF829 Gene

ENSEMBL:
Gene Tree for ZNF829 (if available)
TreeFam:
Gene Tree for ZNF829 (if available)

Paralogs for ZNF829 Gene

Paralogs for ZNF829 Gene

(505) SIMAP similar genes for ZNF829 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF829: view

Variants for ZNF829 Gene

Sequence variations from dbSNP and Humsavar for ZNF829 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs506758 -- 36,913,954(+) cccat(A/G)cacat intron-variant
rs543518 -- 36,895,309(+) gtgtc(C/T)tacat intron-variant
rs565030 -- 36,899,110(+) acctg(A/C)gaagg intron-variant
rs569068 -- 36,908,680(+) TCCCC(A/C/G)CTTTC intron-variant
rs573596 -- 36,909,150(+) ccagt(A/G)taatt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF829 Gene

Variant ID Type Subtype PubMed ID
nsv521605 CNV Loss 19592680
nsv911651 CNV Loss 21882294
nsv458569 CNV Loss 19166990
nsv523848 CNV Loss 19592680
nsv524754 CNV Loss 19592680

Variation tolerance for ZNF829 Gene

Residual Variation Intolerance Score: 26.92% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.87; 34.94% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF829 Gene

HapMap Linkage Disequilibrium report
ZNF829

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF829 Gene

Disorders for ZNF829 Gene

Relevant External Links for ZNF829

Genetic Association Database (GAD)
ZNF829
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF829
genes like me logo Genes that share disorders with ZNF829: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF829 Gene

Publications for ZNF829 Gene

  1. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 67
  2. A Y2H-seq approach defines the human protein methyltransferase interactome. (PMID: 23455924) Weimann M. … Stelzl U. (Nat. Methods 2013) 67
  3. Maintenance of silent chromatin through replication requires SWI/SNF- like chromatin remodeler SMARCAD1. (PMID: 21549307) Rowbotham S.P. … Mermoud J.E. (Mol. Cell 2011) 67
  4. Human POGZ modulates dissociation of HP1alpha from mitotic chromosome arms through Aurora B activation. (PMID: 20562864) Nozawa R.S. … Obuse C. (Nat. Cell Biol. 2010) 67
  5. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 67

Products for ZNF829 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF829
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF829
    • Block miRNA regulation of ZNF829 using miScript Target Protectors

    Sources for ZNF829 Gene

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