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Aliases for ZNF826P Gene

Aliases for ZNF826P Gene

  • Zinc Finger Protein 826, Pseudogene 2 3 5
  • ZNF826 3 4
  • Zinc Finger Protein 826 2

External Ids for ZNF826P Gene

Previous HGNC Symbols for ZNF826P Gene

  • ZNF826

Previous GeneCards Identifiers for ZNF826P Gene

  • GC19M020575
  • GC19M020071
  • GC19M020452
  • GC19M020546
  • GC19M020699
  • GC19M020955
  • GC19M020356
  • GC19M020848
  • GC19M021110
  • GC19M021339

Summaries for ZNF826P Gene

GeneCards Summary for ZNF826P Gene

ZNF826P (Zinc Finger Protein 826, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for ZNF826P Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF826P Gene

Genomics for ZNF826P Gene

Regulatory Elements for ZNF826P Gene

Enhancers for ZNF826P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F020422 1.5 FANTOM5 ENCODE 13.1 +1.2 1173 3.5 BRD4 PKNOX1 MAX POLR2A NFYB USF2 SP2 E2F4 ELF1 REST ZNF826P ZNF90 LOC105372317
GH19F020416 0.4 ENCODE 12.4 +8.2 8222 1.0 ZNF826P BNIP3P22 LOC105372317
GH19F020432 0.3 FANTOM5 0.4 -7.5 -7465 0.4 ENSG00000269043 ZNF826P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF826P on UCSC Golden Path with GeneCards custom track

Promoters for ZNF826P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000641294 1068 2600 BRD4 PKNOX1 SP2 MAX USF2 REST E2F4 GABPA POLR2H SP1

Genomic Location for ZNF826P Gene

Chromosome:
19
Start:
20,340,269 bp from pter
End:
20,424,969 bp from pter
Size:
84,701 bases
Orientation:
Minus strand

Genomic View for ZNF826P Gene

Genes around ZNF826P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF826P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF826P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF826P Gene

Proteins for ZNF826P Gene

  • Protein details for ZNF826P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZT77-ZN826_HUMAN
    Recommended name:
    Putative zinc finger protein 826
    Protein Accession:
    Q6ZT77

    Protein attributes for ZNF826P Gene

    Size:
    177 amino acids
    Molecular mass:
    20580 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF826P Gene

Post-translational modifications for ZNF826P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF826P Gene

Domains & Families for ZNF826P Gene

Protein Domains for ZNF826P Gene

Suggested Antigen Peptide Sequences for ZNF826P Gene

Graphical View of Domain Structure for InterPro Entry

Q6ZT77

UniProtKB/Swiss-Prot:

ZN826_HUMAN :
  • Contains 3 C2H2-type zinc fingers.
Similarity:
  • Contains 3 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF826P: view

No data available for Gene Families for ZNF826P Gene

Function for ZNF826P Gene

Molecular function for ZNF826P Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF826P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF826P: view

Phenotypes for ZNF826P Gene

GenomeRNAi human phenotypes for ZNF826P:
genes like me logo Genes that share phenotypes with ZNF826P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF826P Gene

Localization for ZNF826P Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF826P Gene

Gene Ontology (GO) - Cellular Components for ZNF826P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF826P: view

No data available for Subcellular locations from COMPARTMENTS for ZNF826P Gene

Pathways & Interactions for ZNF826P Gene

SuperPathways for ZNF826P Gene

No Data Available

Interacting Proteins for ZNF826P Gene

Gene Ontology (GO) - Biological Process for ZNF826P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF826P: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF826P Gene

Transcripts for ZNF826P Gene

mRNA/cDNA for ZNF826P Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF826P Gene

Zinc finger protein 826, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF826P Gene

No ASD Table

Relevant External Links for ZNF826P Gene

GeneLoc Exon Structure for
ZNF826P
ECgene alternative splicing isoforms for
ZNF826P

Expression for ZNF826P Gene

mRNA expression in normal human tissues for ZNF826P Gene

Protein differential expression in normal tissues from HIPED for ZNF826P Gene

This gene is overexpressed in Pancreatic juice (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF826P Gene



Protein tissue co-expression partners for ZNF826P Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ZNF826P Gene:

ZNF826P

SOURCE GeneReport for Unigene cluster for ZNF826P Gene:

Hs.631635
genes like me logo Genes that share expression patterns with ZNF826P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF826P Gene

Orthologs for ZNF826P Gene

Evolution for ZNF826P Gene

ENSEMBL:
Gene Tree for ZNF826P (if available)
TreeFam:
Gene Tree for ZNF826P (if available)

No data available for Orthologs for ZNF826P Gene

Paralogs for ZNF826P Gene

(223) SIMAP similar genes for ZNF826P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF826P: view

No data available for Paralogs for ZNF826P Gene

Variants for ZNF826P Gene

Sequence variations from dbSNP and Humsavar for ZNF826P Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10221533 -- 20,400,197(+) AATGG(A/G)TGTAG intron-variant, upstream-variant-2KB
rs10407120 -- 20,411,009(+) acaat(C/G)ctggc intron-variant
rs10407670 -- 20,411,452(+) CAGAA(A/C)ACTCC intron-variant
rs10409276 -- 20,411,412(+) tttaa(C/T)cataa intron-variant
rs10411505 -- 20,401,993(+) GGAAC(C/T)GAAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF826P Gene

Variant ID Type Subtype PubMed ID
dgv1027e212 CNV loss 25503493
dgv33e213 CNV loss 24956385
dgv3456n100 CNV gain 25217958
dgv3457n100 CNV gain 25217958
dgv3460n100 CNV loss 25217958
dgv3461n100 CNV loss 25217958
dgv3462n100 CNV loss 25217958
dgv3463n100 CNV loss 25217958
dgv3464n100 CNV loss 25217958
dgv3465n100 CNV loss 25217958
dgv399n27 CNV loss 19166990
dgv400n27 CNV loss 19166990
dgv401n27 CNV loss 19166990
dgv509e201 CNV deletion 23290073
dgv54n17 CNV loss 16327808
dgv577n67 CNV loss 20364138
dgv6303n54 CNV loss 21841781
dgv6304n54 CNV loss 21841781
dgv6305n54 CNV gain 21841781
dgv6306n54 CNV loss 21841781
dgv6307n54 CNV loss 21841781
dgv6308n54 CNV loss 21841781
dgv6309n54 CNV loss 21841781
dgv630e199 CNV deletion 23128226
dgv69e203 CNV loss 21179565
esv23917 CNV loss 19812545
esv2422114 CNV deletion 20811451
esv2422327 CNV deletion 17116639
esv2666532 CNV deletion 23128226
esv2718311 CNV deletion 23290073
esv2718312 CNV deletion 23290073
esv2758749 CNV loss 17122850
esv3305866 CNV mobile element insertion 20981092
esv33627 CNV loss 17666407
esv33886 CNV gain+loss 17666407
esv3393441 CNV insertion 20981092
esv3556160 CNV deletion 23714750
esv3643884 CNV loss 21293372
esv3893172 CNV gain+loss 25118596
nsv1057155 CNV loss 25217958
nsv1061846 CNV loss 25217958
nsv1121972 CNV deletion 24896259
nsv1160594 CNV deletion 26073780
nsv1160595 CNV deletion 26073780
nsv2437 CNV deletion 18451855
nsv442762 CNV loss 18776908
nsv458377 CNV gain 19166990
nsv470134 CNV loss 18288195
nsv498895 CNV loss 21111241
nsv510758 CNV deletion 20534489
nsv514893 CNV loss 21397061
nsv517263 CNV gain+loss 19592680
nsv519535 CNV gain 19592680
nsv523471 CNV loss 19592680
nsv578805 CNV gain 21841781
nsv578809 CNV gain 21841781
nsv578810 CNV loss 21841781
nsv578815 CNV loss 21841781
nsv833780 CNV gain 17160897
nsv960807 CNV duplication 23825009
nsv9675 CNV loss 18304495

Relevant External Links for ZNF826P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF826P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF826P Gene

Disorders for ZNF826P Gene

Relevant External Links for ZNF826P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF826P

No disorders were found for ZNF826P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF826P Gene

Publications for ZNF826P Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4 64
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF826P Gene

Sources for ZNF826P Gene

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