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Aliases for ZNF821 Gene

Aliases for ZNF821 Gene

  • Zinc Finger Protein 821 2 3

External Ids for ZNF821 Gene

Summaries for ZNF821 Gene

Entrez Gene Summary for ZNF821 Gene

  • This gene encodes a protein with two C2H2 zinc finger motifs and a score-and-three (23)-amino acid peptide repeat (STPR) domain. The STPR domain of the encoded protein binds to double stranded DNA and may also contain a nuclear localization signal, suggesting that this protein interacts with chromosomal DNA. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2011]

GeneCards Summary for ZNF821 Gene

ZNF821 (Zinc Finger Protein 821) is a Protein Coding gene. An important paralog of this gene is RREB1.

UniProtKB/Swiss-Prot for ZNF821 Gene

  • May be involved in transcriptional regulation

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF821 Gene

Genomics for ZNF821 Gene

Genomic Location for ZNF821 Gene

Start:
71,859,680 bp from pter
End:
71,895,336 bp from pter
Size:
35,657 bases
Orientation:
Minus strand

Genomic View for ZNF821 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF821 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF821 Gene

Regulatory Elements for ZNF821 Gene

Proteins for ZNF821 Gene

  • Protein details for ZNF821 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O75541-ZN821_HUMAN
    Recommended name:
    Zinc finger protein 821
    Protein Accession:
    O75541
    Secondary Accessions:
    • A6NK48
    • B4DKK4
    • D3DWS3

    Protein attributes for ZNF821 Gene

    Size:
    412 amino acids
    Molecular mass:
    46794 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF821 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF821 Gene

Proteomics data for ZNF821 Gene at MOPED

Post-translational modifications for ZNF821 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF821 Gene

Domains for ZNF821 Gene

Gene Families for ZNF821 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF821 Gene

UniProtKB/Swiss-Prot:

ZN821_HUMAN
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • O75541
Similarity:
  • Contains 2 C2H2-type zinc fingers.:
    • O75541
genes like me logo Genes that share domains with ZNF821: view

Function for ZNF821 Gene

Molecular function for ZNF821 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF821 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF821: view

miRNA for ZNF821 Gene

miRTarBase miRNAs that target ZNF821

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF821 Gene

Localization for ZNF821 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF821 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF821 Gene COMPARTMENTS Subcellular localization image for ZNF821 gene
Compartment Confidence
nucleus 4
cytosol 1

Gene Ontology (GO) - Cellular Components for ZNF821 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF821: view

Pathways for ZNF821 Gene

SuperPathways for ZNF821 Gene

No Data Available

Interacting Proteins for ZNF821 Gene

Gene Ontology (GO) - Biological Process for ZNF821 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF821: view

No data available for Pathways by source for ZNF821 Gene

Transcripts for ZNF821 Gene

Unigene Clusters for ZNF821 Gene

Zinc finger protein 821:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF821 Gene

ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8a · 8b ^ 9 ^ 10 ^ 11 ^ 12a · 12b · 12c · 12d · 12e · 12f
SP1: - - - - - -
SP2: - - - - - - -
SP3: - - - - - - -
SP4: -
SP5: - - - - -
SP6: - - - - -
SP7: - - - -
SP8: - - - -
SP9: - - - -
SP10: - -
SP11: - - - - - - - -
SP12: - - - -
SP13: - - - -

Relevant External Links for ZNF821 Gene

GeneLoc Exon Structure for
ZNF821
ECgene alternative splicing isoforms for
ZNF821

Expression for ZNF821 Gene

mRNA expression in normal human tissues for ZNF821 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF821 Gene

This gene is overexpressed in Testis (4.2) and Brain - Cerebellar Hemisphere (4.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF821 Gene

SOURCE GeneReport for Unigene cluster for ZNF821 Gene Hs.744055

genes like me logo Genes that share expressions with ZNF821: view

Orthologs for ZNF821 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF821 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF821 36
  • 99.27 (n)
  • 100 (a)
ZNF821 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF821 36
  • 93.77 (n)
  • 97.33 (a)
ZNF821 37
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF821 36
  • 94.26 (n)
  • 98.54 (a)
ZNF821 37
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp821 36
  • 89.72 (n)
  • 95.63 (a)
Zfp821 16
Zfp821 37
  • 95 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZNF821 37
  • 93 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ZNF821 37
  • 92 (a)
OneToOne
chicken
(Gallus gallus)
Aves ZNF821 36
  • 77.67 (n)
  • 83.37 (a)
ZNF821 37
  • 83 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ZNF821 37
  • 67 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.882 36
znf821 36
  • 67.43 (n)
  • 72.66 (a)
zebrafish
(Danio rerio)
Actinopterygii CABZ01083862.1 37
  • 50 (a)
OneToOne
LOC571740 36
  • 57.85 (n)
  • 60.32 (a)
fruit fly
(Drosophila melanogaster)
Insecta peb 37
  • 4 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 12 (a)
OneToOne
Species with no ortholog for ZNF821:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF821 Gene

ENSEMBL:
Gene Tree for ZNF821 (if available)
TreeFam:
Gene Tree for ZNF821 (if available)

Paralogs for ZNF821 Gene

Paralogs for ZNF821 Gene

Selected SIMAP similar genes for ZNF821 Gene using alignment to 9 proteins:

genes like me logo Genes that share paralogs with ZNF821: view

Variants for ZNF821 Gene

Sequence variations from dbSNP and Humsavar for ZNF821 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs12285 -- 71,859,824(-) TGGCT(A/C)AAGGC utr-variant-3-prime
rs13036 -- 71,859,994(-) CCCTC(C/T)TTccc utr-variant-3-prime
rs960618 -- 71,870,511(+) TATGA(A/G)ACAAG intron-variant
rs1063754 -- 71,859,737(-) GTGGG(C/G)CCCCT utr-variant-3-prime
rs1125850 -- 71,882,018(-) TGCTG(A/G)GATTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF821 Gene

Variant ID Type Subtype PubMed ID
nsv7285 OTHER Inversion 18451855
esv1001782 CNV Insertion 20482838
esv267783 CNV Insertion 20981092

Relevant External Links for ZNF821 Gene

HapMap Linkage Disequilibrium report
ZNF821

Disorders for ZNF821 Gene

Relevant External Links for ZNF821

Genetic Association Database (GAD)
ZNF821
Human Genome Epidemiology (HuGE) Navigator
ZNF821
genes like me logo Genes that share disorders with ZNF821: view

No data available for UniProtKB/Swiss-Prot for ZNF821 Gene

Publications for ZNF821 Gene

  1. A "double adaptor" method for improved shotgun library construction. (PMID: 8619474) Andersson B. … Gibbs R.A. (Anal. Biochem. 1996) 2 3
  2. Large-scale concatenation cDNA sequencing. (PMID: 9110174) Yu W. … Gibbs R.A. (Genome Res. 1997) 2 3
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 49
  4. STPR, a 23-amino acid tandem repeat domain, found in the human function-unknown protein ZNF821. (PMID: 20795678) Nonaka Y. … Kawano K. (Biochemistry 2010) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for ZNF821 Gene

Sources for ZNF821 Gene

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