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Aliases for ZNF818P Gene

Subcategory (RNA class) for ZNF818P Gene

lncRNA

Aliases for ZNF818P Gene

  • Zinc Finger Protein 818, Pseudogene 2 3
  • ZNF818 3 4
  • Zinc Finger Protein 818 (Pseudogene) 2
  • Zinc Finger Protein 818 Pseudogene 2
  • Zinc Finger Protein 818 2

External Ids for ZNF818P Gene

ORGUL Members for ZNF818P Gene

Previous HGNC Symbols for ZNF818P Gene

  • ZNF818

Previous GeneCards Identifiers for ZNF818P Gene

  • GC19P058409
  • GC19P053716
  • GC19P050037

Summaries for ZNF818P Gene

GeneCards Summary for ZNF818P Gene

ZNF818P (Zinc Finger Protein 818, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

UniProtKB/Swiss-Prot for ZNF818P Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF818P Gene

Genomics for ZNF818P Gene

Regulatory Elements for ZNF818P Gene

Enhancers for ZNF818P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F053196 0.8 ENCODE 6.6 -15.7 -15709 1.6 CTCF SAP130 GATA3 FOXK2 POLR2A CBX5 ELF1 KAT8 GABPA POLR2H ZNF818P ZNF665 LOC100419845
GH19F052452 0.4 ENCODE 5.7 -759.4 -759406 1.2 SP3 SIN3A ELF1 ZBTB40 ZNF518A ETS1 GABPA CBX1 ZBTB33 ZSCAN29 ZNF534 ZNF578 ZNF818P GC19P052460
GH19F052584 0.8 Ensembl 5.4 -627.8 -627848 0.6 PRDM1 NR2F2 ZNF701 ZNF137P ZNF818P ENSG00000268886 RPL39P34
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF818P on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF818P Gene

Chromosome:
19
Start:
53,212,948 bp from pter
End:
53,216,102 bp from pter
Size:
3,155 bases
Orientation:
Plus strand

Genomic View for ZNF818P Gene

Genes around ZNF818P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF818P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF818P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF818P Gene

Proteins for ZNF818P Gene

  • Protein details for ZNF818P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZRF7-ZN818_HUMAN
    Recommended name:
    Putative zinc finger protein 818
    Protein Accession:
    Q6ZRF7

    Protein attributes for ZNF818P Gene

    Size:
    136 amino acids
    Molecular mass:
    15513 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF818P Gene

Post-translational modifications for ZNF818P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF818P Gene

Domains & Families for ZNF818P Gene

Protein Domains for ZNF818P Gene

Suggested Antigen Peptide Sequences for ZNF818P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6ZRF7

UniProtKB/Swiss-Prot:

ZN818_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 2 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 2 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF818P: view

No data available for Gene Families for ZNF818P Gene

Function for ZNF818P Gene

Molecular function for ZNF818P Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF818P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF818P: view

Phenotypes for ZNF818P Gene

GenomeRNAi human phenotypes for ZNF818P:
genes like me logo Genes that share phenotypes with ZNF818P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF818P Gene

Localization for ZNF818P Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF818P Gene

Gene Ontology (GO) - Cellular Components for ZNF818P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF818P: view

No data available for Subcellular locations from COMPARTMENTS for ZNF818P Gene

Pathways & Interactions for ZNF818P Gene

SuperPathways for ZNF818P Gene

No Data Available

Interacting Proteins for ZNF818P Gene

Gene Ontology (GO) - Biological Process for ZNF818P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF818P: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF818P Gene

Transcripts for ZNF818P Gene

mRNA/cDNA for ZNF818P Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:

Unigene Clusters for ZNF818P Gene

Zinc finger protein 818, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF818P Gene

No ASD Table

Relevant External Links for ZNF818P Gene

GeneLoc Exon Structure for
ZNF818P
ECgene alternative splicing isoforms for
ZNF818P

Expression for ZNF818P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF818P Gene

Protein differential expression in normal tissues from HIPED for ZNF818P Gene

This gene is overexpressed in Pancreatic juice (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF818P Gene



Protein tissue co-expression partners for ZNF818P Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ZNF818P Gene:

ZNF818P

SOURCE GeneReport for Unigene cluster for ZNF818P Gene:

Hs.444446
genes like me logo Genes that share expression patterns with ZNF818P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF818P Gene

Orthologs for ZNF818P Gene

No data available for Orthologs and Evolution for ZNF818P Gene

Paralogs for ZNF818P Gene

(398) SIMAP similar genes for ZNF818P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF818P: view

No data available for Paralogs for ZNF818P Gene

Variants for ZNF818P Gene

Sequence variations from dbSNP and Humsavar for ZNF818P Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10402454 -- 53,212,090(+) GTGAT(A/G)CATGT upstream-variant-2KB
rs10416778 -- 53,213,557(+) AATTC(A/G)TACTG nc-transcript-variant
rs10775558 -- 53,212,937(+) AATGC(A/G)GCAAG upstream-variant-2KB
rs10853858 -- 53,213,025(+) TGGAA(A/G)AACCT nc-transcript-variant
rs10853859 -- 53,213,207(+) AATTC(A/G)CACCT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF818P Gene

Variant ID Type Subtype PubMed ID
esv2718787 CNV deletion 23290073
esv2718812 CNV deletion 23290073
esv3644741 CNV gain 21293372
esv3644742 CNV gain 21293372
nsv1078889 OTHER inversion 25765185
nsv1141887 OTHER inversion 24896259

Relevant External Links for ZNF818P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF818P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF818P Gene

Disorders for ZNF818P Gene

Relevant External Links for ZNF818P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF818P

No disorders were found for ZNF818P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF818P Gene

Publications for ZNF818P Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  2. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3 64

Products for ZNF818P Gene

Sources for ZNF818P Gene

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