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Aliases for ZNF813 Gene

Aliases for ZNF813 Gene

  • Zinc Finger Protein 813 2 3 5

External Ids for ZNF813 Gene

Previous GeneCards Identifiers for ZNF813 Gene

  • GC19P058686
  • GC19P058664
  • GC19P053970
  • GC19P050291

Summaries for ZNF813 Gene

GeneCards Summary for ZNF813 Gene

ZNF813 (Zinc Finger Protein 813) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF845.

UniProtKB/Swiss-Prot for ZNF813 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF813 Gene

Genomics for ZNF813 Gene

Regulatory Elements for ZNF813 Gene

Enhancers for ZNF813 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F053864 1.5 FANTOM5 ENCODE 16.4 +401.2 401180 9.8 PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766 ZNF845 ZNF765 ZNF816 ENSG00000235681 ZNF813 TPM3P6 LENG8-AS1 MYADM ZNF525 ZNF665
GH19F053389 0.8 ENCODE 24.5 -77.8 -77807 1.8 KLF1 SUZ12 CREB3L1 ZNF76 DEAF1 DIDO1 ZNF766 ZNF366 POLR2A ZNF143 ZNF808 ZNF765 ZNF525 ZNF813 ENSG00000268970 ZNF845 ZNF137P ZNF816 ENSG00000269825 TPM3P6
GH19F053364 1.1 ENCODE 16.4 -102.0 -102045 1.6 HDGF CREB3L1 ZFP64 ARID4B SIN3A DMAP1 KLF13 ZNF263 SP3 REST ZNF525 ZNF808 ZNF845 ENSG00000268970 ZNF137P ZNF765 ZNF816 ENSG00000269825 ZNF813 TPM3P6
GH19F053893 0.7 ENCODE 24.4 +425.4 425447 0.2 SUZ12 CREB3L1 HCFC1 ZBTB11 ZNF76 DEAF1 SIX5 ZEB2 ETS1 MBD2 ZNF765 CDC42EP5 ZNF813 ZNF845 ZNF816 ENSG00000235681 TPM3P6 LENG8-AS1 ZNF525 ZNF665
GH19F054199 1.6 FANTOM5 ENCODE 10 +738.0 737976 12.1 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 LILRB5 PRPF31 RPS9 LILRB3 LILRA6 LILRA2 ZNF765 ZNF525 LILRA4 ENSG00000269288
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF813 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF813 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000348706 165 2201 ATF1 PKNOX1 SIN3A ARID4B DMAP1 SLC30A9 SP3 SP5 MXD4 KAT8
ENSR00001818768 1865 801 HMBOX1

Transcription factor binding sites by QIAGEN in the ZNF813 gene promoter:

Genomic Location for ZNF813 Gene

Chromosome:
19
Start:
53,467,735 bp from pter
End:
53,496,255 bp from pter
Size:
28,521 bases
Orientation:
Plus strand

Genomic View for ZNF813 Gene

Genes around ZNF813 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF813 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF813 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF813 Gene

Proteins for ZNF813 Gene

  • Protein details for ZNF813 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZN06-ZN813_HUMAN
    Recommended name:
    Zinc finger protein 813
    Protein Accession:
    Q6ZN06

    Protein attributes for ZNF813 Gene

    Size:
    617 amino acids
    Molecular mass:
    71721 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAD18569.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for ZNF813 Gene

Post-translational modifications for ZNF813 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF813 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF813 Gene

Domains & Families for ZNF813 Gene

Gene Families for ZNF813 Gene

Protein Domains for ZNF813 Gene

Suggested Antigen Peptide Sequences for ZNF813 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6ZN06

UniProtKB/Swiss-Prot:

ZN813_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 14 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 14 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF813: view

Function for ZNF813 Gene

Molecular function for ZNF813 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF813 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF813: view
genes like me logo Genes that share phenotypes with ZNF813: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF813 Gene

Localization for ZNF813 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF813 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF813 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF813 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF813: view

Pathways & Interactions for ZNF813 Gene

SuperPathways for ZNF813 Gene

No Data Available

Interacting Proteins for ZNF813 Gene

Gene Ontology (GO) - Biological Process for ZNF813 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF813: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF813 Gene

Transcripts for ZNF813 Gene

mRNA/cDNA for ZNF813 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(9) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF813 Gene

Zinc finger protein 813:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF813 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b
SP1: -
SP2:
SP3: -

Relevant External Links for ZNF813 Gene

GeneLoc Exon Structure for
ZNF813
ECgene alternative splicing isoforms for
ZNF813

Expression for ZNF813 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF813 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for ZNF813 Gene



NURSA nuclear receptor signaling pathways regulating expression of ZNF813 Gene:

ZNF813

SOURCE GeneReport for Unigene cluster for ZNF813 Gene:

Hs.710780
genes like me logo Genes that share expression patterns with ZNF813: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF813 Gene

Orthologs for ZNF813 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF813 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 100 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 54 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia -- 35
  • 42 (a)
ManyToMany
Species where no ortholog for ZNF813 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF813 Gene

ENSEMBL:
Gene Tree for ZNF813 (if available)
TreeFam:
Gene Tree for ZNF813 (if available)

Paralogs for ZNF813 Gene

(505) SIMAP similar genes for ZNF813 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for ZNF813 Gene

genes like me logo Genes that share paralogs with ZNF813: view

Variants for ZNF813 Gene

Sequence variations from dbSNP and Humsavar for ZNF813 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10401310 -- 53,482,860(+) gctga(A/G)agtac intron-variant
rs10402448 -- 53,482,898(+) tattg(G/T)atttt intron-variant
rs10402859 -- 53,492,276(+) TTCAT(A/C)GTGGA utr-variant-3-prime
rs10404498 -- 53,477,849(+) CTTTG(G/T)GTTCA intron-variant
rs10405917 -- 53,487,432(+) atgga(A/G)tctca intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF813 Gene

Variant ID Type Subtype PubMed ID
nsv963077 CNV duplication 23825009
nsv956579 CNV deletion 24416366
nsv580101 CNV gain 21841781
nsv580097 CNV gain+loss 21841781
nsv515728 CNV gain+loss 19592680
nsv470156 CNV gain 18288195
nsv458779 CNV loss 19166990
nsv1072897 CNV deletion 25765185
nsv1059834 CNV gain 25217958
nsv1055773 CNV gain 25217958
nsv1055497 CNV gain 25217958
esv3893245 CNV loss 25118596
esv3893244 CNV gain 25118596
esv3893243 CNV gain 25118596
esv3893241 CNV gain+loss 25118596
esv3644760 CNV loss 21293372
esv3644758 CNV gain 21293372
esv3644757 CNV loss 21293372
esv3644756 CNV gain 21293372
esv3583517 CNV loss 25503493
esv2762954 CNV gain+loss 21179565
esv2758770 CNV loss 17122850
esv2718824 CNV deletion 23290073
esv2718823 CNV deletion 23290073
esv2718812 CNV deletion 23290073
esv2491793 CNV deletion 19546169
dgv88e19 CNV loss 19470904
dgv661e199 CNV deletion 23128226
dgv6540n54 CNV loss 21841781
dgv6539n54 CNV loss 21841781
dgv6537n54 CNV gain 21841781
dgv6536n54 CNV gain 21841781
dgv530e201 CNV deletion 23290073
dgv431n27 CNV gain 19166990
dgv3652n100 CNV gain 25217958
dgv3651n100 CNV gain 25217958
dgv3650n100 CNV gain+loss 25217958
dgv3649n100 CNV loss 25217958
dgv3648n100 CNV gain 25217958
dgv1071e212 CNV gain 25503493

Variation tolerance for ZNF813 Gene

Residual Variation Intolerance Score: 87% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 8.65; 86.36% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF813 Gene

Human Gene Mutation Database (HGMD)
ZNF813
SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF813

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF813 Gene

Disorders for ZNF813 Gene

Relevant External Links for ZNF813

Genetic Association Database (GAD)
ZNF813
Human Genome Epidemiology (HuGE) Navigator
ZNF813
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF813

No disorders were found for ZNF813 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF813 Gene

Publications for ZNF813 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4 64

Products for ZNF813 Gene

Sources for ZNF813 Gene

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