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Aliases for ZNF800 Gene

Aliases for ZNF800 Gene

  • Zinc Finger Protein 800 2 3

External Ids for ZNF800 Gene

Summaries for ZNF800 Gene

GeneCards Summary for ZNF800 Gene

ZNF800 (Zinc Finger Protein 800) is a Protein Coding gene.

UniProtKB/Swiss-Prot for ZNF800 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF800 Gene

Genomics for ZNF800 Gene

Genomic Location for ZNF800 Gene

Start:
127,346,790 bp from pter
End:
127,431,924 bp from pter
Size:
85,135 bases
Orientation:
Minus strand

Genomic View for ZNF800 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF800 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF800 Gene

Regulatory Elements for ZNF800 Gene

Proteins for ZNF800 Gene

  • Protein details for ZNF800 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q2TB10-ZN800_HUMAN
    Recommended name:
    Zinc finger protein 800
    Protein Accession:
    Q2TB10
    Secondary Accessions:
    • Q9HBN0

    Protein attributes for ZNF800 Gene

    Size:
    664 amino acids
    Molecular mass:
    75236 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAG17274.1; Type=Frameshift; Positions=335; Evidence={ECO:0000305}; Sequence=AAG17274.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};

neXtProt entry for ZNF800 Gene

Proteomics data for ZNF800 Gene at MOPED

Post-translational modifications for ZNF800 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF800 Gene

No data available for DME Specific Peptides for ZNF800 Gene

Domains for ZNF800 Gene

Gene Families for ZNF800 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF800 Gene

UniProtKB/Swiss-Prot:

ZN800_HUMAN
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q2TB10
Similarity:
  • Contains 7 C2H2-type zinc fingers.:
    • Q2TB10
genes like me logo Genes that share domains with ZNF800: view

Function for ZNF800 Gene

Molecular function for ZNF800 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF800 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF800: view

miRNA for ZNF800 Gene

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF800 Gene

Localization for ZNF800 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF800 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF800 Gene COMPARTMENTS Subcellular localization image for ZNF800 gene
Compartment Confidence
nucleus 4
cytosol 2
plasma membrane 1

Gene Ontology (GO) - Cellular Components for ZNF800 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF800: view

Pathways for ZNF800 Gene

SuperPathways for ZNF800 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF800 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF800: view

No data available for Pathways by source for ZNF800 Gene

Transcripts for ZNF800 Gene

Unigene Clusters for ZNF800 Gene

Zinc finger protein 800:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF800 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b · 5c ^ 6
SP1: -
SP2: -
SP3:

Relevant External Links for ZNF800 Gene

GeneLoc Exon Structure for
ZNF800
ECgene alternative splicing isoforms for
ZNF800

Expression for ZNF800 Gene

mRNA expression in normal human tissues for ZNF800 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF800 Gene

SOURCE GeneReport for Unigene cluster for ZNF800 Gene Hs.159006

genes like me logo Genes that share expressions with ZNF800: view

Orthologs for ZNF800 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF800 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF800 36
  • 99.8 (n)
  • 100 (a)
ZNF800 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF800 36
  • 96.64 (n)
  • 97.89 (a)
ZNF800 37
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF800 36
  • 97.74 (n)
  • 98.95 (a)
ZNF800 37
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp800 36
  • 93.39 (n)
  • 94.86 (a)
Zfp800 16
Zfp800 37
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZNF800 37
  • 94 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ZNF800 37
  • 90 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zfp800 36
  • 93.01 (n)
  • 94.87 (a)
chicken
(Gallus gallus)
Aves ZNF800 36
  • 83.99 (n)
  • 85.69 (a)
ZNF800 37
  • 83 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ZNF800 37
  • 70 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia znf800 36
  • 66.15 (n)
  • 60.03 (a)
zebrafish
(Danio rerio)
Actinopterygii -- 36
znf800a 37
  • 39 (a)
OneToMany
znf800b 36
  • 50.33 (n)
  • 44.37 (a)
znf800b 37
  • 45 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta CG10979 37
  • 15 (a)
OneToOne
Species with no ortholog for ZNF800:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF800 Gene

ENSEMBL:
Gene Tree for ZNF800 (if available)
TreeFam:
Gene Tree for ZNF800 (if available)

Paralogs for ZNF800 Gene

No data available for Paralogs for ZNF800 Gene

Variants for ZNF800 Gene

Sequence variations from dbSNP and Humsavar for ZNF800 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs712696 -- 127,347,041(+) cccag(C/T)agtgt downstream-variant-500B
rs951808 -- 127,365,510(+) TGTAA(A/T)CTCAA intron-variant
rs951809 -- 127,365,970(+) TGCTA(A/G)GTACA intron-variant
rs951991 -- 127,346,822(+) tgaca(C/G)ctgtg downstream-variant-500B
rs951992 -- 127,346,784(+) ggagc(A/G)gggaa downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for ZNF800 Gene

Variant ID Type Subtype PubMed ID
nsv820163 CNV Gain 19587683

Relevant External Links for ZNF800 Gene

HapMap Linkage Disequilibrium report
ZNF800

Disorders for ZNF800 Gene

Relevant External Links for ZNF800

Genetic Association Database (GAD)
ZNF800
genes like me logo Genes that share disorders with ZNF800: view

No data available for UniProtKB/Swiss-Prot for ZNF800 Gene

Publications for ZNF800 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions. (PMID: 17567994) Denoeud F. … Reymond A. (Genome Res. 2007) 3
  4. Structured RNAs in the ENCODE selected regions of the human genome. (PMID: 17568003) Washietl S. … Stadler P.F. (Genome Res. 2007) 3
  5. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3

Products for ZNF800 Gene

Sources for ZNF800 Gene

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