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Aliases for ZNF799 Gene

Aliases for ZNF799 Gene

  • Zinc Finger Protein 799 2 3 5
  • Zinc Finger Protein 842 2 3 4
  • ZNF842 3 4
  • Zinc Finger Protein HIT-40 3
  • Zinc Finger Protein 14 3
  • HIT-40 3

External Ids for ZNF799 Gene

Previous HGNC Symbols for ZNF799 Gene

  • ZNF842

Previous GeneCards Identifiers for ZNF799 Gene

  • GC19M012353
  • GC19M012492
  • GC19M012075
  • GC19M012500

Summaries for ZNF799 Gene

GeneCards Summary for ZNF799 Gene

ZNF799 (Zinc Finger Protein 799) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF443.

UniProtKB/Swiss-Prot for ZNF799 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF799 Gene

Genomics for ZNF799 Gene

Regulatory Elements for ZNF799 Gene

Enhancers for ZNF799 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F012781 1.6 FANTOM5 ENCODE 70.6 -375.3 -375315 16.0 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ZNF136 CCDC130 ZNF564 ZNF442 ZNF844 ZNF44 WDR83OS ZNF799 TRMT1 ZNF625
GH19F011420 1.1 Ensembl ENCODE 60.5 +992.1 992140 3.1 ATF1 PKNOX1 ZNF493 ZFP64 SIN3A DMAP1 ZNF48 ETS1 ZNF121 GLIS2 ZNF627 ZNF136 ZNF442 ZNF844 ZNF625 ZNF44 ZNF799 ZNF763 ZNF441 ZNF491
GH19F012983 1 FANTOM5 Ensembl ENCODE 52.8 -570.8 -570760 3.5 HDGF PKNOX1 CREB3L1 ARNT MLX SIN3A ARID4B DMAP1 ZNF2 ZNF143 ZNF136 CCDC130 ZNF564 ZNF625 WDR83OS ZNF844 ZNF442 MRI1 ZNF799 ZNF44
GH19F011531 1.5 FANTOM5 Ensembl ENCODE 51.9 +881.5 881545 1.6 PKNOX1 ATF1 ZFP64 ZNF493 FOS ZNF202 ZNF263 REST ZNF518A ZNF623 ZNF627 ZNF136 ZNF844 ZNF442 ZNF625 ZNF44 ZNF799 ZNF441 ZNF491 ZNF700
GH19F011534 1 Ensembl ENCODE 36.8 +878.3 878346 2.9 HDGF PKNOX1 ARNT ARID4B YBX1 ZNF2 ZNF143 FOS KLF13 SP3 ZNF700 ZNF44 ZNF799 ZNF136 ZNF763 ZNF627 ZNF878 TIMM29 ZNF442 YIPF2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF799 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF799 Gene

Chromosome:
19
Start:
12,390,014 bp from pter
End:
12,413,983 bp from pter
Size:
23,970 bases
Orientation:
Minus strand

Genomic View for ZNF799 Gene

Genes around ZNF799 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF799 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF799 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF799 Gene

Proteins for ZNF799 Gene

  • Protein details for ZNF799 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96GE5-ZN799_HUMAN
    Recommended name:
    Zinc finger protein 799
    Protein Accession:
    Q96GE5

    Protein attributes for ZNF799 Gene

    Size:
    643 amino acids
    Molecular mass:
    74288 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF799 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF799 Gene

Post-translational modifications for ZNF799 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF799 Gene

No data available for DME Specific Peptides for ZNF799 Gene

Domains & Families for ZNF799 Gene

Gene Families for ZNF799 Gene

Protein Domains for ZNF799 Gene

Suggested Antigen Peptide Sequences for ZNF799 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96GE5

UniProtKB/Swiss-Prot:

ZN799_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 18 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 18 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF799: view

Function for ZNF799 Gene

Molecular function for ZNF799 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF799 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF799: view
genes like me logo Genes that share phenotypes with ZNF799: view

Animal Model Products

miRNA for ZNF799 Gene

miRTarBase miRNAs that target ZNF799

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF799 Gene

Localization for ZNF799 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF799 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF799 Gene COMPARTMENTS Subcellular localization image for ZNF799 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF799 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF799: view

Pathways & Interactions for ZNF799 Gene

SuperPathways for ZNF799 Gene

SuperPathway Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF799: view

Pathways by source for ZNF799 Gene

2 Reactome pathways for ZNF799 Gene

Interacting Proteins for ZNF799 Gene

Gene Ontology (GO) - Biological Process for ZNF799 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF799: view

No data available for SIGNOR curated interactions for ZNF799 Gene

Transcripts for ZNF799 Gene

mRNA/cDNA for ZNF799 Gene

(5) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF799 Gene

Zinc finger protein 799:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF799 Gene

No ASD Table

Relevant External Links for ZNF799 Gene

GeneLoc Exon Structure for
ZNF799
ECgene alternative splicing isoforms for
ZNF799

Expression for ZNF799 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF799 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

NURSA nuclear receptor signaling pathways regulating expression of ZNF799 Gene:

ZNF799

SOURCE GeneReport for Unigene cluster for ZNF799 Gene:

Hs.546637
genes like me logo Genes that share expression patterns with ZNF799: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF799 Gene

Orthologs for ZNF799 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF799 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF799 34
  • 99.06 (n)
-- 35
  • 98 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Zfp799 34 16
  • 63.61 (n)
rat
(Rattus norvegicus)
Mammalia Zfp799 34
  • 62.45 (n)
cow
(Bos Taurus)
Mammalia -- 35
  • 49 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii Dr.15807 34
Species where no ortholog for ZNF799 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF799 Gene

ENSEMBL:
Gene Tree for ZNF799 (if available)
TreeFam:
Gene Tree for ZNF799 (if available)

Paralogs for ZNF799 Gene

(575) SIMAP similar genes for ZNF799 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for ZNF799 Gene

genes like me logo Genes that share paralogs with ZNF799: view

Variants for ZNF799 Gene

Sequence variations from dbSNP and Humsavar for ZNF799 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1035464 -- 12,392,331(-) TTCAC(A/G)TTCAA intron-variant
rs10419804 -- 12,401,516(+) TCCTG(G/T)ACACT upstream-variant-2KB
rs10425337 -- 12,399,477(+) CCAGG(A/G)GTTAG intron-variant
rs111324580 -- 12,397,935(+) AAATA(C/T)ACTCC intron-variant
rs111329774 -- 12,389,549(+) GGTAC(A/G)ATCCT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for ZNF799 Gene

Variant ID Type Subtype PubMed ID
dgv3431n100 CNV loss 25217958
dgv3432n100 CNV gain 25217958
esv21983 CNV gain 19812545
esv2421660 CNV duplication 20811451
esv2528408 CNV deletion 19546169
esv2718192 CNV deletion 23290073
esv2718193 CNV deletion 23290073
esv2718194 CNV deletion 23290073
esv2758745 CNV gain 17122850
esv2760528 CNV gain 21179565
esv2762025 CNV loss 21179565
esv3574319 CNV gain 25503493
esv3643700 CNV loss 21293372
esv3643701 CNV gain 21293372
nsv1063391 CNV gain 25217958
nsv1140383 CNV deletion 24896259
nsv578625 CNV gain 21841781
nsv960792 CNV duplication 23825009

Variation tolerance for ZNF799 Gene

Residual Variation Intolerance Score: 86.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.47; 64.29% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF799 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF799

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF799 Gene

Disorders for ZNF799 Gene

Relevant External Links for ZNF799

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF799

No disorders were found for ZNF799 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF799 Gene

Publications for ZNF799 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  2. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  5. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4 64

Products for ZNF799 Gene

Sources for ZNF799 Gene

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