Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF793 Gene

Aliases for ZNF793 Gene

  • Zinc Finger Protein 793 2 3

External Ids for ZNF793 Gene

Previous GeneCards Identifiers for ZNF793 Gene

  • GC19P042690
  • GC19P037997
  • GC19P034448

Summaries for ZNF793 Gene

GeneCards Summary for ZNF793 Gene

ZNF793 (Zinc Finger Protein 793) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF182.

UniProtKB/Swiss-Prot for ZNF793 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF793 Gene

Genomics for ZNF793 Gene

Regulatory Elements for ZNF793 Gene

Transcription factor binding sites by QIAGEN in the ZNF793 gene promoter:

Genomic Location for ZNF793 Gene

Start:
37,506,421 bp from pter
End:
37,548,762 bp from pter
Size:
42,342 bases
Orientation:
Plus strand

Genomic View for ZNF793 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF793 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF793 Gene

Proteins for ZNF793 Gene

  • Protein details for ZNF793 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZN11-ZN793_HUMAN
    Recommended name:
    Zinc finger protein 793
    Protein Accession:
    Q6ZN11
    Secondary Accessions:
    • E9PGN4
    • Q7Z3Q9

    Protein attributes for ZNF793 Gene

    Size:
    406 amino acids
    Molecular mass:
    46927 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAD97772.1; Type=Frameshift; Positions=291; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF793 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF793 Gene

Proteomics data for ZNF793 Gene at MOPED

Post-translational modifications for ZNF793 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF793 Gene

No data available for DME Specific Peptides for ZNF793 Gene

Domains for ZNF793 Gene

Gene Families for ZNF793 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF793 Gene

Suggested Antigen Peptide Sequences for ZNF793 Gene

Graphical View of Domain Structure for InterPro Entry

Q6ZN11

UniProtKB/Swiss-Prot:

ZN793_HUMAN :
  • Q6ZN11
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 6 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF793: view

Function for ZNF793 Gene

Molecular function for ZNF793 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF793 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF793: view

Animal Model Products

CRISPR Products

miRNA for ZNF793 Gene

miRTarBase miRNAs that target ZNF793

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF793

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF793 Gene

Localization for ZNF793 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF793 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF793 Gene COMPARTMENTS Subcellular localization image for ZNF793 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF793 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF793: view

Pathways for ZNF793 Gene

SuperPathways for ZNF793 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF793: view

Pathways by source for ZNF793 Gene

2 Reactome pathways for ZNF793 Gene

Interacting Proteins for ZNF793 Gene

Gene Ontology (GO) - Biological Process for ZNF793 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF793: view

Transcripts for ZNF793 Gene

Unigene Clusters for ZNF793 Gene

Zinc finger protein 793:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF793

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF793 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c
SP1:
SP2: -

Relevant External Links for ZNF793 Gene

GeneLoc Exon Structure for
ZNF793
ECgene alternative splicing isoforms for
ZNF793

Expression for ZNF793 Gene

mRNA expression in normal human tissues for ZNF793 Gene

SOURCE GeneReport for Unigene cluster for ZNF793 Gene Hs.568010

genes like me logo Genes that share expressions with ZNF793: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for ZNF793 Gene

Orthologs for ZNF793 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF793 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF793 35
  • 87.18 (n)
  • 84.37 (a)
ZNF793 36
  • 83 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ZNF793 35
  • 99.01 (n)
  • 98.52 (a)
ZNF793 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF793 36
  • 87 (a)
OneToOne
Species with no ortholog for ZNF793:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF793 Gene

ENSEMBL:
Gene Tree for ZNF793 (if available)
TreeFam:
Gene Tree for ZNF793 (if available)

Paralogs for ZNF793 Gene

Selected SIMAP similar genes for ZNF793 Gene using alignment to 7 proteins:

Pseudogenes.org Pseudogenes for ZNF793 Gene

genes like me logo Genes that share paralogs with ZNF793: view

Variants for ZNF793 Gene

Sequence variations from dbSNP and Humsavar for ZNF793 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs955476 -- 37,540,980(+) taaaa(A/T)TTTTT utr-variant-3-prime
rs965162 -- 37,516,042(-) AGGTC(A/G)TAGCC intron-variant
rs1038084 -- 37,539,780(-) CAATG(G/T)TAACT utr-variant-3-prime
rs1038085 -- 37,539,539(-) TTTCT(A/T)ATATG utr-variant-3-prime
rs2126976 -- 37,540,031(-) TGTTG(A/G)GATTA utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for ZNF793 Gene

Variant ID Type Subtype PubMed ID
dgv1081e1 CNV Complex 17122850
nsv833819 CNV Gain 17160897
nsv2478 CNV Loss 18451855
esv269267 CNV Insertion 20981092
esv272929 CNV Insertion 20981092

Relevant External Links for ZNF793 Gene

HapMap Linkage Disequilibrium report
ZNF793

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF793 Gene

Disorders for ZNF793 Gene

No disorders were found for ZNF793 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ZNF793 Gene

Publications for ZNF793 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4
  5. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4

Products for ZNF793 Gene

Sources for ZNF793 Gene

Back to Top

Content