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Aliases for ZNF79 Gene

Aliases for ZNF79 Gene

  • Zinc Finger Protein 79 2 3
  • ZNFpT7 3 4
  • Zinc Finger Protein 79 (PT7) 2
  • PT7 3

External Ids for ZNF79 Gene

Previous GeneCards Identifiers for ZNF79 Gene

  • GC09P121301
  • GC09P121833
  • GC09P123640
  • GC09P125562
  • GC09P127266
  • GC09P129227
  • GC09P130186
  • GC09P099802

Summaries for ZNF79 Gene

GeneCards Summary for ZNF79 Gene

ZNF79 (Zinc Finger Protein 79) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF529.

UniProtKB/Swiss-Prot for ZNF79 Gene

  • May be involved in transcriptional regulation

Gene Wiki entry for ZNF79 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF79 Gene

Genomics for ZNF79 Gene

Regulatory Elements for ZNF79 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF79 Gene

Chromosome:
9
Start:
127,424,374 bp from pter
End:
127,446,964 bp from pter
Size:
22,591 bases
Orientation:
Plus strand

Genomic View for ZNF79 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF79 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF79 Gene

Proteins for ZNF79 Gene

  • Protein details for ZNF79 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q15937-ZNF79_HUMAN
    Recommended name:
    Zinc finger protein 79
    Protein Accession:
    Q15937
    Secondary Accessions:
    • Q5VVW1
    • Q96NV1

    Protein attributes for ZNF79 Gene

    Size:
    498 amino acids
    Molecular mass:
    55350 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF79 Gene

Proteomics data for ZNF79 Gene at MOPED

Post-translational modifications for ZNF79 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF79 Gene

No data available for DME Specific Peptides for ZNF79 Gene

Domains & Families for ZNF79 Gene

Gene Families for ZNF79 Gene

Protein Domains for ZNF79 Gene

Suggested Antigen Peptide Sequences for ZNF79 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q15937

UniProtKB/Swiss-Prot:

ZNF79_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 11 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 11 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF79: view

Function for ZNF79 Gene

Molecular function for ZNF79 Gene

GENATLAS Biochemistry:
zinc finger protein 79
UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA --
GO:0003674 molecular_function ND --
GO:0003676 nucleic acid binding --
GO:0003700 transcription factor activity, sequence-specific DNA binding IBA --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ZNF79: view
genes like me logo Genes that share phenotypes with ZNF79: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF79

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF79 Gene

Localization for ZNF79 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF79 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF79 Gene COMPARTMENTS Subcellular localization image for ZNF79 gene
Compartment Confidence
nucleus 3
cytosol 2
plasma membrane 2

Gene Ontology (GO) - Cellular Components for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005654 nucleoplasm IBA --
genes like me logo Genes that share ontologies with ZNF79: view

Pathways & Interactions for ZNF79 Gene

SuperPathways for ZNF79 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF79: view

Pathways by source for ZNF79 Gene

2 Reactome pathways for ZNF79 Gene

Gene Ontology (GO) - Biological Process for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with ZNF79: view

No data available for SIGNOR curated interactions for ZNF79 Gene

Drugs & Compounds for ZNF79 Gene

No Compound Related Data Available

Transcripts for ZNF79 Gene

Unigene Clusters for ZNF79 Gene

Zinc finger protein 79:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF79

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF79 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b
SP1: - - -
SP2: -
SP3: - - - -
SP4:

Relevant External Links for ZNF79 Gene

GeneLoc Exon Structure for
ZNF79
ECgene alternative splicing isoforms for
ZNF79

Expression for ZNF79 Gene

mRNA expression in normal human tissues for ZNF79 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZNF79 Gene



SOURCE GeneReport for Unigene cluster for ZNF79 Gene Hs.522399

genes like me logo Genes that share expression patterns with ZNF79: view

Protein tissue co-expression partners for ZNF79 Gene

- Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF79 Gene

Orthologs for ZNF79 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF79 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF79 35
  • 85.34 (n)
  • 86.55 (a)
ZNF79 36
  • 65 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF79 35
  • 85.04 (n)
  • 85.11 (a)
ZNF79 36
  • 84 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ZNF79 35
  • 99.33 (n)
  • 98.59 (a)
ZNF79 36
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZNF79 36
  • 64 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta BG:DS02740.8 37
  • 39 (a)
CG1832 37
  • 54 (a)
CG9650 37
  • 48 (a)
gl 37
  • 51 (a)
Kr 37
  • 50 (a)
CG6654 36
  • 21 (a)
OneToMany
Species with no ortholog for ZNF79:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF79 Gene

ENSEMBL:
Gene Tree for ZNF79 (if available)
TreeFam:
Gene Tree for ZNF79 (if available)

Paralogs for ZNF79 Gene

(550) SIMAP similar genes for ZNF79 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for ZNF79 Gene

genes like me logo Genes that share paralogs with ZNF79: view

Variants for ZNF79 Gene

Sequence variations from dbSNP and Humsavar for ZNF79 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs2247781 -- 127,446,645(+) GTAGT(C/T)AGTCT utr-variant-3-prime
rs2247905 -- 127,446,097(+) AGAGC(G/T)TGCTG utr-variant-3-prime
rs2248025 -- 127,444,483(+) CAGAA(C/T)GCCAA reference, synonymous-codon
rs2248154 -- 127,443,855(+) gagat(C/T)gtgcc intron-variant
rs2265686 -- 127,442,497(+) ggagc(G/T)tgcag intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF79 Gene

Variant ID Type Subtype PubMed ID
esv1000498 CNV Deletion 20482838
dgv1376e199 CNV Deletion 23128226
esv2665517 CNV Deletion 23128226

Variation tolerance for ZNF79 Gene

Residual Variation Intolerance Score: 59.47% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.31; 26.05% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF79 Gene

HapMap Linkage Disequilibrium report
ZNF79
Human Gene Mutation Database (HGMD)
ZNF79

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF79 Gene

Disorders for ZNF79 Gene

Relevant External Links for ZNF79

Genetic Association Database (GAD)
ZNF79
Human Genome Epidemiology (HuGE) Navigator
ZNF79
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF79
genes like me logo Genes that share disorders with ZNF79: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF79 Gene

Publications for ZNF79 Gene

  1. Proteomic analysis of differentially expressed proteins between metastatic and non-metastatic human colorectal carcinoma cell lines. (PMID: 15947549) Ying-Tao Z. … Yi-Li W. (Eur J Gastroenterol Hepatol 2005) 23 67
  2. Chromosomal localization of four human zinc finger cDNAs. (PMID: 8478004) Huebner K. … Lania L. (Hum. Genet. 1993) 2 67
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 67
  4. Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals. (PMID: 19851296) Oguri M. … Yamada Y. (Am. J. Hypertens. 2010) 67
  5. Association of genetic variants with hemorrhagic stroke in Japanese individuals. (PMID: 20198315) Yoshida T. … Yamada Y. (Int. J. Mol. Med. 2010) 67

Products for ZNF79 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF79
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF79
    • Block miRNA regulation of ZNF79 using miScript Target Protectors

    Sources for ZNF79 Gene

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