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Aliases for ZNF79 Gene

Aliases for ZNF79 Gene

  • Zinc Finger Protein 79 2 3
  • ZNFpT7 3 4
  • Zinc Finger Protein 79 (PT7) 2
  • PT7 3

External Ids for ZNF79 Gene

Summaries for ZNF79 Gene

GeneCards Summary for ZNF79 Gene

ZNF79 (Zinc Finger Protein 79) is a Protein Coding gene. Diseases associated with ZNF79 include prostate carcinoma in situ. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF529.

UniProtKB/Swiss-Prot for ZNF79 Gene

  • May be involved in transcriptional regulation

Gene Wiki entry for ZNF79 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF79 Gene

Genomics for ZNF79 Gene

Genomic Location for ZNF79 Gene

Start:
127,424,374 bp from pter
End:
127,447,246 bp from pter
Size:
22,873 bases
Orientation:
Plus strand

Genomic View for ZNF79 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF79 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF79 Gene

Regulatory Elements for ZNF79 Gene

Proteins for ZNF79 Gene

  • Protein details for ZNF79 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q15937-ZNF79_HUMAN
    Recommended name:
    Zinc finger protein 79
    Protein Accession:
    Q15937
    Secondary Accessions:
    • Q5VVW1
    • Q96NV1

    Protein attributes for ZNF79 Gene

    Size:
    498 amino acids
    Molecular mass:
    55350 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF79 Gene

Proteomics data for ZNF79 Gene at MOPED

Post-translational modifications for ZNF79 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys443

Other Protein References for ZNF79 Gene

No data available for DME Specific Peptides for ZNF79 Gene

Domains for ZNF79 Gene

Gene Families for ZNF79 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

UniProtKB/Swiss-Prot:

ZNF79_HUMAN
Domain:
  • Contains 1 KRAB domain.:
    • Q15937
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q15937
Similarity:
  • Contains 11 C2H2-type zinc fingers.:
    • Q15937
genes like me logo Genes that share domains with ZNF79: view

Function for ZNF79 Gene

Molecular function for ZNF79 Gene

GENATLAS Biochemistry: zinc finger protein 79
UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF79: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF79 Gene

Localization for ZNF79 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF79 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF79 Gene COMPARTMENTS Subcellular localization image for ZNF79 gene
Compartment Confidence
nucleus 5
cytosol 2
chloroplast 1
golgi apparatus 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF79: view

Pathways for ZNF79 Gene

SuperPathways for ZNF79 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF79: view

Pathways by source for ZNF79 Gene

2 Reactome pathways for ZNF79 Gene

Gene Ontology (GO) - Biological Process for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with ZNF79: view

Transcripts for ZNF79 Gene

Unigene Clusters for ZNF79 Gene

Zinc finger protein 79:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF79 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b
SP1: - - -
SP2: -
SP3: - - - -
SP4:

Relevant External Links for ZNF79 Gene

GeneLoc Exon Structure for
ZNF79
ECgene alternative splicing isoforms for
ZNF79

Expression for ZNF79 Gene

mRNA expression in normal human tissues for ZNF79 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF79 Gene

SOURCE GeneReport for Unigene cluster for ZNF79 Gene Hs.522399

genes like me logo Genes that share expressions with ZNF79: view

Orthologs for ZNF79 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF79 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF79 36
  • 99.33 (n)
  • 98.59 (a)
ZNF79 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF79 36
  • 85.34 (n)
  • 86.55 (a)
ZNF79 37
  • 65 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF79 36
  • 85.04 (n)
  • 85.11 (a)
ZNF79 37
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZNF79 37
  • 64 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG6654 37
  • 21 (a)
OneToMany
CG9650 38
  • 48 (a)
BG:DS02740.8 38
  • 39 (a)
Kr 38
  • 50 (a)
gl 38
  • 51 (a)
CG1832 38
  • 54 (a)
Species with no ortholog for ZNF79:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF79 Gene

ENSEMBL:
Gene Tree for ZNF79 (if available)
TreeFam:
Gene Tree for ZNF79 (if available)

Paralogs for ZNF79 Gene

Selected SIMAP similar genes for ZNF79 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for ZNF79 Gene

genes like me logo Genes that share paralogs with ZNF79: view

Variants for ZNF79 Gene

Sequence variations from dbSNP and Humsavar for ZNF79 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs2247781 -- 127,446,645(+) GTAGT(C/T)AGTCT utr-variant-3-prime
rs2247905 -- 127,446,097(+) AGAGC(G/T)TGCTG utr-variant-3-prime
rs2248025 -- 127,444,483(+) CAGAA(C/T)GCCAA reference, synonymous-codon
rs2248154 -- 127,443,855(+) gagat(C/T)gtgcc intron-variant
rs2265686 -- 127,442,497(+) ggagc(G/T)tgcag intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF79 Gene

Variant ID Type Subtype PubMed ID
esv1000498 CNV Deletion 20482838
dgv1376e199 CNV Deletion 23128226
esv2665517 CNV Deletion 23128226

Relevant External Links for ZNF79 Gene

HapMap Linkage Disequilibrium report
ZNF79
Human Gene Mutation Database (HGMD)
ZNF79

Disorders for ZNF79 Gene

(1) University of Copenhagen DISEASES for ZNF79 Gene

Relevant External Links for ZNF79

Genetic Association Database (GAD)
ZNF79
Human Genome Epidemiology (HuGE) Navigator
ZNF79
genes like me logo Genes that share disorders with ZNF79: view

No data available for UniProtKB/Swiss-Prot for ZNF79 Gene

Publications for ZNF79 Gene

  1. Chromosomal localization of four human zinc finger cDNAs. (PMID: 8478004) Huebner K. … Lania L. (Hum. Genet. 1993) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4
  4. Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals. (PMID: 19851296) Oguri M. … Yamada Y. (Am. J. Hypertens. 2010) 3 49
  5. Association of genetic variants with hemorrhagic stroke in Japanese individuals. (PMID: 20198315) Yoshida T. … Yamada Y. (Int. J. Mol. Med. 2010) 3 49

Products for ZNF79 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF79
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF79
    • Block miRNA regulation of ZNF79 using miScript Target Protectors

    Sources for ZNF79 Gene

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