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Aliases for ZNF79 Gene

Aliases for ZNF79 Gene

  • Zinc Finger Protein 79 2 3 5
  • ZNFpT7 3 4
  • Zinc Finger Protein 79 (PT7) 2
  • PT7 3

External Ids for ZNF79 Gene

Previous GeneCards Identifiers for ZNF79 Gene

  • GC09P121301
  • GC09P121833
  • GC09P123640
  • GC09P125562
  • GC09P127266
  • GC09P129227
  • GC09P130186
  • GC09P099802

Summaries for ZNF79 Gene

GeneCards Summary for ZNF79 Gene

ZNF79 (Zinc Finger Protein 79) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF135.

UniProtKB/Swiss-Prot for ZNF79 Gene

  • May be involved in transcriptional regulation.

Gene Wiki entry for ZNF79 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF79 Gene

Genomics for ZNF79 Gene

Regulatory Elements for ZNF79 Gene

Enhancers for ZNF79 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G127946 1.4 ENCODE dbSUPER 28.9 +524.6 524636 5.2 FOXA2 MLX CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 PIP5KL1 ZNF79 SNORA65 NAIF1 COQ4 WDR34 DPM2 GC09P127942 FAM102A
GH09G126718 2 FANTOM5 Ensembl ENCODE dbSUPER 18.3 -702.8 -702782 5.8 HDGF PKNOX1 CREB3L1 AGO1 ARID4B FEZF1 ZNF2 ZBTB7B YY1 FOS ZNF79 SNORA65 ZBTB43 MVB12B ZBTB34 PIR57638
GH09G127516 1.9 FANTOM5 Ensembl ENCODE dbSUPER 15.7 +97.1 97133 9.3 PKNOX1 ARNT SIN3A FEZF1 ZNF2 GTF3C2 ZNF766 GATA2 CBX5 ZNF143 RPL12 SLC2A8 ZNF79 SNORA65 NAIF1 URM1 FAM129B CDK9 TOR2A SH2D3C
GH09G126436 2.3 VISTA dbSUPER 12.5 -987.1 -987084 2.3 BCOR CTCF PTBP1 ZMYM3 SALL2 RAD21 FOSL1 ZBTB48 ADNP FOS MVB12B ZNF79 ENSG00000252985 LOC105376276
GH09G128363 1.3 ENCODE dbSUPER 21.7 +939.1 939143 0.2 HNRNPUL1 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 FOS ZNF548 ZNF79 PKN3 LOC102723566 URM1 SNORA65 TMSB4XP4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF79 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF79 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000241689 -74 2201 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766

Genomic Location for ZNF79 Gene

Chromosome:
9
Start:
127,424,374 bp from pter
End:
127,446,964 bp from pter
Size:
22,591 bases
Orientation:
Plus strand

Genomic View for ZNF79 Gene

Genes around ZNF79 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF79 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF79 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF79 Gene

Proteins for ZNF79 Gene

  • Protein details for ZNF79 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q15937-ZNF79_HUMAN
    Recommended name:
    Zinc finger protein 79
    Protein Accession:
    Q15937
    Secondary Accessions:
    • Q5VVW1
    • Q96NV1

    Protein attributes for ZNF79 Gene

    Size:
    498 amino acids
    Molecular mass:
    55350 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF79 Gene

Post-translational modifications for ZNF79 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF79 Gene

Domains & Families for ZNF79 Gene

Gene Families for ZNF79 Gene

Protein Domains for ZNF79 Gene

Suggested Antigen Peptide Sequences for ZNF79 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q15937

UniProtKB/Swiss-Prot:

ZNF79_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF79: view

Function for ZNF79 Gene

Molecular function for ZNF79 Gene

GENATLAS Biochemistry:
zinc finger protein 79
UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0003676 nucleic acid binding IEA --
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF79: view
genes like me logo Genes that share phenotypes with ZNF79: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF79 Gene

Localization for ZNF79 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF79 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF79 gene
Compartment Confidence
nucleus 5
cytosol 3
plasma membrane 2

Gene Ontology (GO) - Cellular Components for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF79: view

Pathways & Interactions for ZNF79 Gene

SuperPathways for ZNF79 Gene

SuperPathway Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF79: view

Pathways by source for ZNF79 Gene

2 Reactome pathways for ZNF79 Gene

Gene Ontology (GO) - Biological Process for ZNF79 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with ZNF79: view

No data available for SIGNOR curated interactions for ZNF79 Gene

Drugs & Compounds for ZNF79 Gene

No Compound Related Data Available

Transcripts for ZNF79 Gene

Unigene Clusters for ZNF79 Gene

Zinc finger protein 79:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF79 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b
SP1: - - -
SP2: -
SP3: - - - -
SP4:

Relevant External Links for ZNF79 Gene

GeneLoc Exon Structure for
ZNF79
ECgene alternative splicing isoforms for
ZNF79

Expression for ZNF79 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF79 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZNF79 Gene



Protein tissue co-expression partners for ZNF79 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ZNF79 Gene:

ZNF79

SOURCE GeneReport for Unigene cluster for ZNF79 Gene:

Hs.522399

Evidence on tissue expression from TISSUES for ZNF79 Gene

  • Lung(4.2)
genes like me logo Genes that share expression patterns with ZNF79: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF79 Gene

Orthologs for ZNF79 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF79 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF79 34 35
  • 99.33 (n)
cow
(Bos Taurus)
Mammalia ZNF79 34 35
  • 85.34 (n)
dog
(Canis familiaris)
Mammalia ZNF79 34 35
  • 85.04 (n)
oppossum
(Monodelphis domestica)
Mammalia ZNF79 35
  • 64 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG1832 36
  • 54 (a)
gl 36
  • 51 (a)
Kr 36
  • 50 (a)
CG9650 36
  • 48 (a)
BG:DS02740.8 36
  • 39 (a)
CG6654 35
  • 21 (a)
OneToMany
Species where no ortholog for ZNF79 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF79 Gene

ENSEMBL:
Gene Tree for ZNF79 (if available)
TreeFam:
Gene Tree for ZNF79 (if available)

Paralogs for ZNF79 Gene

(550) SIMAP similar genes for ZNF79 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for ZNF79 Gene

genes like me logo Genes that share paralogs with ZNF79: view

Variants for ZNF79 Gene

Sequence variations from dbSNP and Humsavar for ZNF79 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000103421 -- 127,444,360(+) AAGCC(C/G)TATGA reference, synonymous-codon
rs1000155790 -- 127,444,589(+) ATCAG(A/G)GAATT reference, missense
rs1000195555 -- 127,426,031(+) AGGAA(A/G)GGAAG intron-variant
rs1000238705 -- 127,438,283(+) GCTTC(A/T)GATTG intron-variant
rs1000301393 -- 127,431,519(+) GCTAA(G/T)ATTAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF79 Gene

Variant ID Type Subtype PubMed ID
dgv1376e199 CNV deletion 23128226
esv1000498 CNV deletion 20482838
esv2665517 CNV deletion 23128226
esv3573391 CNV loss 25503493
esv3621782 CNV loss 21293372

Variation tolerance for ZNF79 Gene

Residual Variation Intolerance Score: 59.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.31; 26.05% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF79 Gene

Human Gene Mutation Database (HGMD)
ZNF79
SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF79

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF79 Gene

Disorders for ZNF79 Gene

Relevant External Links for ZNF79

Genetic Association Database (GAD)
ZNF79
Human Genome Epidemiology (HuGE) Navigator
ZNF79
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF79

No disorders were found for ZNF79 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF79 Gene

Publications for ZNF79 Gene

  1. Chromosomal localization of four human zinc finger cDNAs. (PMID: 8478004) Huebner K. … Lania L. (Hum. Genet. 1993) 2 3 4 64
  2. Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals. (PMID: 19851296) Oguri M. … Yamada Y. (Am. J. Hypertens. 2010) 3 46 64
  3. Association of genetic variants with hemorrhagic stroke in Japanese individuals. (PMID: 20198315) Yoshida T. … Yamada Y. (Int. J. Mol. Med. 2010) 3 46 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  5. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4 64

Products for ZNF79 Gene

Sources for ZNF79 Gene

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