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Aliases for ZNF787 Gene

Aliases for ZNF787 Gene

  • Zinc Finger Protein 787 2 3
  • TTF-I-Interacting Peptide 20 3 4
  • Transcription Termination Factor I Interacting Peptide 20 3
  • TIP20 3

External Ids for ZNF787 Gene

Summaries for ZNF787 Gene

GeneCards Summary for ZNF787 Gene

ZNF787 (Zinc Finger Protein 787) is a Protein Coding gene. An important paralog of this gene is ZFP42.

UniProtKB/Swiss-Prot for ZNF787 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF787 Gene

Genomics for ZNF787 Gene

Genomic Location for ZNF787 Gene

Start:
56,087,366 bp from pter
End:
56,121,280 bp from pter
Size:
33,915 bases
Orientation:
Minus strand

Genomic View for ZNF787 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF787 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF787 Gene

Regulatory Elements for ZNF787 Gene

Proteins for ZNF787 Gene

  • Protein details for ZNF787 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6DD87-ZN787_HUMAN
    Recommended name:
    Zinc finger protein 787
    Protein Accession:
    Q6DD87
    Secondary Accessions:
    • O00455

    Protein attributes for ZNF787 Gene

    Size:
    383 amino acids
    Molecular mass:
    40543 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAB58413.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

neXtProt entry for ZNF787 Gene

Proteomics data for ZNF787 Gene at MOPED

Post-translational modifications for ZNF787 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF787 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF787 Gene

Domains for ZNF787 Gene

Gene Families for ZNF787 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF787 Gene

UniProtKB/Swiss-Prot:

ZN787_HUMAN
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q6DD87
Similarity:
  • Contains 7 C2H2-type zinc fingers.:
    • Q6DD87
genes like me logo Genes that share domains with ZNF787: view

Function for ZNF787 Gene

Molecular function for ZNF787 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF787 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF787: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF787 Gene

Localization for ZNF787 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF787 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF787 Gene COMPARTMENTS Subcellular localization image for ZNF787 gene
Compartment Confidence
nucleus 3
cytosol 2
endoplasmic reticulum 1
golgi apparatus 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for ZNF787 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF787: view

Pathways for ZNF787 Gene

SuperPathways for ZNF787 Gene

No Data Available

Interacting Proteins for ZNF787 Gene

Selected Interacting proteins: Q6DD87-ZN787_HUMAN for ZNF787 Gene via I2D

Symbol External ID(s) Details
PTEN

Gene Ontology (GO) - Biological Process for ZNF787 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF787: view

No data available for Pathways by source for ZNF787 Gene

Transcripts for ZNF787 Gene

mRNA/cDNA for ZNF787 Gene

Unigene Clusters for ZNF787 Gene

Zinc finger protein 787:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF787 Gene

No ASD Table

Relevant External Links for ZNF787 Gene

GeneLoc Exon Structure for
ZNF787
ECgene alternative splicing isoforms for
ZNF787

Expression for ZNF787 Gene

mRNA expression in normal human tissues for ZNF787 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF787 Gene

This gene is overexpressed in Whole Blood (4.7).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for ZNF787 Gene

SOURCE GeneReport for Unigene cluster for ZNF787 Gene Hs.397153

genes like me logo Genes that share expressions with ZNF787: view

Orthologs for ZNF787 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF787 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF787 36
  • 92.67 (n)
  • 94.24 (a)
ZNF787 37
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF787 36
  • 91.19 (n)
  • 96.07 (a)
ZNF787 37
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp787 36
  • 85.74 (n)
  • 92.65 (a)
Zfp787 16
Zfp787 37
  • 93 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zfp787 36
  • 85.21 (n)
  • 91.86 (a)
zebrafish
(Danio rerio)
Actinopterygii ZNF787 37
  • 34 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta pho 37
  • 7 (a)
ManyToMany
phol 37
  • 6 (a)
ManyToMany
Species with no ortholog for ZNF787:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF787 Gene

ENSEMBL:
Gene Tree for ZNF787 (if available)
TreeFam:
Gene Tree for ZNF787 (if available)

Paralogs for ZNF787 Gene

Paralogs for ZNF787 Gene

Selected SIMAP similar genes for ZNF787 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with ZNF787: view

Variants for ZNF787 Gene

Sequence variations from dbSNP and Humsavar for ZNF787 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs473045 -- 56,103,283(-) GCCCT(C/T)GGTGC intron-variant
rs473953 -- 56,119,289(-) ATGTA(A/G)TCCAT intron-variant
rs478402 -- 56,115,979(-) TCACC(C/T)AGAGT intron-variant
rs481936 -- 56,099,497(-) CTGAC(C/T)TCAGG intron-variant
rs490015 -- 56,089,158(-) CGTAG(C/T)AGCCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF787 Gene

Variant ID Type Subtype PubMed ID
nsv833883 CNV Loss 17160897
dgv206n21 CNV Loss 19592680
dgv4027n71 CNV Loss 21882294
nsv912513 CNV Loss 21882294
dgv207n21 CNV Loss 19592680
esv2657534 CNV Deletion 23128226
nsv912515 CNV Loss 21882294
nsv912516 CNV Gain 21882294
esv2719010 CNV Deletion 23290073
esv2064147 CNV Deletion 18987734
esv4826 CNV Deletion 18987735
dgv585e201 CNV Deletion 23290073
esv2719013 CNV Deletion 23290073
esv991692 CNV Deletion 20482838
esv1322949 CNV Deletion 17803354
esv2719015 CNV Deletion 23290073
esv2719016 CNV Deletion 23290073
esv2719018 CNV Deletion 23290073
esv1002478 CNV Insertion 20482838
esv1007685 CNV Insertion 20482838
esv1027952 CNV Insertion 17803354
esv2719019 CNV Deletion 23290073

Relevant External Links for ZNF787 Gene

HapMap Linkage Disequilibrium report
ZNF787

Disorders for ZNF787 Gene

No disorders were found for ZNF787 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF787 Gene

Publications for ZNF787 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Analysis of phosphatase and tensin homolog tumor suppressor interacting proteins by in vitro and in silico proteomics. (PMID: 15717329) Crockett D.K. … Lim M.S. (Proteomics 2005) 3
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  4. Cleavage and polyadenylation specificity factor 1 (CPSF1) regulates alternative splicing of interleukin 7 receptor (IL7R) exon 6. (PMID: 23151878) Evsyukova I. … Garcia-Blanco M.A. (RNA 2013) 3
  5. Proteomic investigation of the interactome of FMNL1 in hematopoietic cells unveils a role in calcium-dependent membrane plasticity. (PMID: 23182705) Han Y. … Krackhardt A.M. (J Proteomics 2013) 3

Products for ZNF787 Gene

Sources for ZNF787 Gene

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