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Aliases for ZNF780B Gene

Aliases for ZNF780B Gene

  • Zinc Finger Protein 780B 2 3
  • Zinc Finger Protein 779 2 3 4
  • ZNF779 3 4

External Ids for ZNF780B Gene

Previous HGNC Symbols for ZNF780B Gene

  • ZNF779

Previous GeneCards Identifiers for ZNF780B Gene

  • GC19M045232
  • GC19M040534
  • GC19M036971

Summaries for ZNF780B Gene

GeneCards Summary for ZNF780B Gene

ZNF780B (Zinc Finger Protein 780B) is a Protein Coding gene. An important paralog of this gene is ZNF268.

UniProtKB/Swiss-Prot for ZNF780B Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF780B Gene

Genomics for ZNF780B Gene

Regulatory Elements for ZNF780B Gene

Genomic Location for ZNF780B Gene

40,028,260 bp from pter
40,056,238 bp from pter
27,979 bases
Minus strand

Genomic View for ZNF780B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF780B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF780B Gene

Proteins for ZNF780B Gene

  • Protein details for ZNF780B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Zinc finger protein 780B
    Protein Accession:
    Secondary Accessions:
    • B9EH00

    Protein attributes for ZNF780B Gene

    833 amino acids
    Molecular mass:
    96807 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF780B Gene

Proteomics data for ZNF780B Gene at MOPED

Post-translational modifications for ZNF780B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF780B Gene

No data available for DME Specific Peptides for ZNF780B Gene

Domains for ZNF780B Gene

Gene Families for ZNF780B Gene

  • ZNF :Zinc fingers, C2H2-type

Suggested Antigen Peptide Sequences for ZNF780B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Q9Y6R6
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 23 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF780B: view

Function for ZNF780B Gene

Molecular function for ZNF780B Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF780B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF780B: view

Animal Model Products

CRISPR Products

miRNA for ZNF780B Gene

miRTarBase miRNAs that target ZNF780B

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF780B Gene

Localization for ZNF780B Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF780B Gene

Subcellular locations from

Jensen Localization Image for ZNF780B Gene COMPARTMENTS Subcellular localization image for ZNF780B gene
Compartment Confidence
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF780B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF780B: view

Pathways for ZNF780B Gene

SuperPathways for ZNF780B Gene

No Data Available

Interacting Proteins for ZNF780B Gene

Gene Ontology (GO) - Biological Process for ZNF780B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF780B: view

No data available for Pathways by source for ZNF780B Gene

Transcripts for ZNF780B Gene

Unigene Clusters for ZNF780B Gene

Zinc finger protein 780B:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF780B

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF780B Gene

No ASD Table

Relevant External Links for ZNF780B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZNF780B Gene

mRNA expression in normal human tissues for ZNF780B Gene

SOURCE GeneReport for Unigene cluster for ZNF780B Gene Hs.101139

genes like me logo Genes that share expressions with ZNF780B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for ZNF780B Gene

Orthologs for ZNF780B Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF780B Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia LOC100684414 35
  • 78.22 (n)
  • 69.59 (a)
ZNF780B 36
  • 53 (a)
(Mus musculus)
Mammalia Zfp780b 35
  • 70.58 (n)
  • 59.52 (a)
Zfp780b 16
1700049G17Rik 36
  • 53 (a)
Zfp780b 36
  • 57 (a)
(Rattus norvegicus)
Mammalia Zfp780b 35
  • 68.55 (n)
  • 55.9 (a)
(Bos Taurus)
Mammalia -- 36
  • 41 (a)
-- 36
  • 45 (a)
-- 36
  • 33 (a)
(Monodelphis domestica)
Mammalia -- 36
  • 43 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 51 (a)
(Pan troglodytes)
Mammalia -- 36
  • 51 (a)
Species with no ortholog for ZNF780B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF780B Gene

Gene Tree for ZNF780B (if available)
Gene Tree for ZNF780B (if available)

Paralogs for ZNF780B Gene

Selected SIMAP similar genes for ZNF780B Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZNF780B: view

Variants for ZNF780B Gene

Sequence variations from dbSNP and Humsavar for ZNF780B Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs3754 -- 40,028,429(+) AAAAA(A/T)GTCTC utr-variant-3-prime
rs13775 -- 40,037,377(+) cacta(A/G)gtctg intron-variant
rs163212 -- 40,050,128(+) ggagg(C/T)ggaag intron-variant
rs163213 -- 40,053,046(+) tttct(A/G)gaaat intron-variant
rs170900 -- 40,048,059(+) CGGAA(G/T)GTCTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF780B Gene

Variant ID Type Subtype PubMed ID
nsv2486 CNV Insertion 18451855

Relevant External Links for ZNF780B Gene

HapMap Linkage Disequilibrium report
Human Gene Mutation Database (HGMD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF780B Gene

Disorders for ZNF780B Gene

Relevant External Links for ZNF780B

Genetic Association Database (GAD)

No disorders were found for ZNF780B Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for ZNF780B Gene

Publications for ZNF780B Gene

  1. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 48
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 48
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 48

Products for ZNF780B Gene

Sources for ZNF780B Gene

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