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Aliases for ZNF738 Gene

Aliases for ZNF738 Gene

  • Zinc Finger Protein 738 2 3

External Ids for ZNF738 Gene

Summaries for ZNF738 Gene

GeneCards Summary for ZNF738 Gene

ZNF738 (Zinc Finger Protein 738) is a Pseudogene. Among its related pathways are Gene Expression and Gene Expression. GO annotations related to this gene include ubiquitin-protein transferase activity. An important paralog of this gene is ENSG00000267552.

UniProtKB/Swiss-Prot for ZNF738 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF738 Gene

Genomics for ZNF738 Gene

Genomic Location for ZNF738 Gene

Start:
21,358,930 bp from pter
End:
21,388,582 bp from pter
Size:
29,653 bases
Orientation:
Plus strand

Genomic View for ZNF738 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF738 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF738 Gene

Regulatory Elements for ZNF738 Gene

Transcription factor binding sites by QIAGEN in the ZNF738 gene promoter:

Proteins for ZNF738 Gene

  • Protein details for ZNF738 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NE65-ZN738_HUMAN
    Recommended name:
    Protein ZNF738
    Protein Accession:
    Q8NE65
    Secondary Accessions:
    • A8K4N7

    Protein attributes for ZNF738 Gene

    Size:
    137 amino acids
    Molecular mass:
    15884 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF738 Gene

Proteomics data for ZNF738 Gene at MOPED

Post-translational modifications for ZNF738 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys12 and Lys32

Other Protein References for ZNF738 Gene

No data available for DME Specific Peptides for ZNF738 Gene

Domains for ZNF738 Gene

Protein Domains for ZNF738 Gene

UniProtKB/Swiss-Prot:

ZN738_HUMAN
Domain:
  • Contains 1 KRAB domain.:
    • Q8NE65
genes like me logo Genes that share domains with ZNF738: view

No data available for Gene Families for ZNF738 Gene

Function for ZNF738 Gene

Molecular function for ZNF738 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF738 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0004842 ubiquitin-protein transferase activity ISS --
genes like me logo Genes that share ontologies with ZNF738: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF738 Gene

Localization for ZNF738 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF738 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF738 Gene COMPARTMENTS Subcellular localization image for ZNF738 gene
Compartment Confidence
nucleus 4
cytosol 2
endoplasmic reticulum 1
extracellular 1

Gene Ontology (GO) - Cellular Components for ZNF738 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF738: view

Pathways for ZNF738 Gene

SuperPathways for ZNF738 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF738: view

Pathways by source for ZNF738 Gene

2 Reactome pathways for ZNF738 Gene

Interacting Proteins for ZNF738 Gene

Gene Ontology (GO) - Biological Process for ZNF738 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000209 protein polyubiquitination ISS --
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF738: view

Transcripts for ZNF738 Gene

mRNA/cDNA for ZNF738 Gene

(6) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF738 Gene

Zinc finger protein 738:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF738 Gene

No ASD Table

Relevant External Links for ZNF738 Gene

GeneLoc Exon Structure for
ZNF738
ECgene alternative splicing isoforms for
ZNF738

Expression for ZNF738 Gene

mRNA expression in normal human tissues for ZNF738 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF738 Gene

SOURCE GeneReport for Unigene cluster for ZNF738 Gene Hs.124384

genes like me logo Genes that share expressions with ZNF738: view

Orthologs for ZNF738 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF738 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF738 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 37
  • 39 (a)
ManyToMany
-- 37
  • 34 (a)
ManyToMany
-- 37
  • 32 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 53 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm10037 37
  • 39 (a)
ManyToMany
Gm26965 37
  • 47 (a)
ManyToMany
RP24-242F4.8 37
  • 40 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 23 (a)
OneToMany
Species with no ortholog for ZNF738:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF738 Gene

ENSEMBL:
Gene Tree for ZNF738 (if available)
TreeFam:
Gene Tree for ZNF738 (if available)

Paralogs for ZNF738 Gene

Paralogs for ZNF738 Gene

Selected SIMAP similar genes for ZNF738 Gene using alignment to 5 proteins:

Pseudogenes.org Pseudogenes for ZNF738 Gene

genes like me logo Genes that share paralogs with ZNF738: view

Variants for ZNF738 Gene

Sequence variations from dbSNP and Humsavar for ZNF738 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs924485 -- 21,377,654(+) gatgt(A/G)gcttt nc-transcript-variant
rs1142653 -- 21,361,769(+) AGGAC(A/G)ACCTG nc-transcript-variant
rs1827225 -- 21,384,558(-) AATTA(C/T)CTTAT nc-transcript-variant
rs1846713 -- 21,373,429(+) gggac(C/T)gttct intron-variant
rs1846714 -- 21,373,761(+) aagac(A/G)aaaga intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF738 Gene

Variant ID Type Subtype PubMed ID
nsv458377 CNV Gain 19166990
esv2665276 CNV Deletion 23128226
esv4924 CNV Complex 18987735
esv2718325 CNV Deletion 23290073
dgv3807n71 CNV Loss 21882294
nsv911420 CNV Loss 21882294
esv2751783 CNV Loss 17911159
esv2663001 CNV Deletion 23128226
esv2718330 CNV Deletion 23290073
esv2718331 CNV Deletion 23290073
esv2718332 CNV Deletion 23290073
esv2718333 CNV Deletion 23290073

Relevant External Links for ZNF738 Gene

HapMap Linkage Disequilibrium report
ZNF738

Disorders for ZNF738 Gene

No disorders were found for ZNF738 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF738 Gene

Publications for ZNF738 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ZNF738 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF738
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF738
    • Block miRNA regulation of ZNF738 using miScript Target Protectors

    Sources for ZNF738 Gene

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