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Aliases for ZNF707 Gene

Aliases for ZNF707 Gene

  • Zinc Finger Protein 707 2 3

External Ids for ZNF707 Gene

Previous GeneCards Identifiers for ZNF707 Gene

  • GC08P144825
  • GC08P144838
  • GC08P144766
  • GC08P140019

Summaries for ZNF707 Gene

GeneCards Summary for ZNF707 Gene

ZNF707 (Zinc Finger Protein 707) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZFP92.

UniProtKB/Swiss-Prot for ZNF707 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF707 Gene

Genomics for ZNF707 Gene

Regulatory Elements for ZNF707 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF707 Gene

Start:
143,684,452 bp from pter
End:
143,713,898 bp from pter
Size:
29,447 bases
Orientation:
Plus strand

Genomic View for ZNF707 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF707 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF707 Gene

Proteins for ZNF707 Gene

  • Protein details for ZNF707 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96C28-ZN707_HUMAN
    Recommended name:
    Zinc finger protein 707
    Protein Accession:
    Q96C28
    Secondary Accessions:
    • A8K317
    • B3KNY1
    • D3DWK7

    Protein attributes for ZNF707 Gene

    Size:
    371 amino acids
    Molecular mass:
    43088 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH14894.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAF83121.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

neXtProt entry for ZNF707 Gene

Proteomics data for ZNF707 Gene at MOPED

Post-translational modifications for ZNF707 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for ZNF707 Gene

Domains for ZNF707 Gene

Gene Families for ZNF707 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF707 Gene

Suggested Antigen Peptide Sequences for ZNF707 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96C28

UniProtKB/Swiss-Prot:

ZN707_HUMAN :
  • Q96C28
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 7 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF707: view

Function for ZNF707 Gene

Molecular function for ZNF707 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF707 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF707: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF707

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF707 Gene

Localization for ZNF707 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF707 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF707 Gene COMPARTMENTS Subcellular localization image for ZNF707 gene
Compartment Confidence
nucleus 3

Gene Ontology (GO) - Cellular Components for ZNF707 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF707: view

Pathways for ZNF707 Gene

SuperPathways for ZNF707 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF707: view

Pathways by source for ZNF707 Gene

2 Reactome pathways for ZNF707 Gene

Interacting Proteins for ZNF707 Gene

Gene Ontology (GO) - Biological Process for ZNF707 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF707: view

Transcripts for ZNF707 Gene

Unigene Clusters for ZNF707 Gene

Zinc finger protein 707:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF707

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF707 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8a · 8b ^ 9a · 9b · 9c · 9d · 9e · 9f ^ 10a · 10b · 10c · 10d · 10e ^
SP1: - - - - - - - - - - - -
SP2: - - - - - - - - - - - - - - -
SP3: - - - - - - - - - - - - - - - - -
SP4: - - - - - - - - - - - - - - - - - -
SP5: - - - - - - - - - - - - -
SP6: - - - - -
SP7: - - - - - - - -
SP8: - - - - - - - - - - - - - - -
SP9: - - - - - - - - -
SP10: - - - - - - - - -
SP11: - - - - - - - - - - - - - - - - - - - -
SP12: - - - - - - - - - - - - - - - - - - -
SP13: - - - - - - - - - -
SP14: - - - -
SP15: - - - - - - - - - - - -
SP16: - - - - -
SP17: - - - - - - -
SP18: - - -

ExUns: 11a · 11b · 11c · 11d · 11e · 11f
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:
SP17:
SP18:

Relevant External Links for ZNF707 Gene

GeneLoc Exon Structure for
ZNF707
ECgene alternative splicing isoforms for
ZNF707

Expression for ZNF707 Gene

mRNA expression in normal human tissues for ZNF707 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF707 Gene

SOURCE GeneReport for Unigene cluster for ZNF707 Gene Hs.521922

genes like me logo Genes that share expressions with ZNF707: view

Expression partners for ZNF707 Gene

In Situ Assay Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF707 Gene

Orthologs for ZNF707 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ZNF707 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Zfp707 35
  • 74.43 (n)
  • 68.66 (a)
Zfp707 16
Zfp707 36
  • 69 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ZNF707 35
  • 98.83 (n)
  • 98.11 (a)
ZNF707 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1311188 35
  • 71.95 (n)
  • 67.71 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 31 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 32 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 36
  • 28 (a)
ManyToMany
-- 36
  • 32 (a)
ManyToMany
-- 36
  • 26 (a)
ManyToMany
-- 36
  • 34 (a)
ManyToMany
-- 36
  • 32 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes ZAP1 36
  • 9 (a)
OneToMany
Species with no ortholog for ZNF707:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF707 Gene

ENSEMBL:
Gene Tree for ZNF707 (if available)
TreeFam:
Gene Tree for ZNF707 (if available)

Paralogs for ZNF707 Gene

Paralogs for ZNF707 Gene

Selected SIMAP similar genes for ZNF707 Gene using alignment to 9 proteins:

genes like me logo Genes that share paralogs with ZNF707: view

Variants for ZNF707 Gene

Sequence variations from dbSNP and Humsavar for ZNF707 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs3204170 -- 143,695,072(+) AATAC(C/T)GAACC utr-variant-3-prime, nc-transcript-variant
rs4874088 -- 143,692,518(+) GGTGT(C/T)GGATC intron-variant
rs4874089 -- 143,692,558(+) GGTGT(C/T)GCATC intron-variant
rs4874090 -- 143,692,560(+) TGTTG(C/G)ATCCC intron-variant
rs4874091 -- 143,692,640(+) TGTCG(C/G)ATCCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF707 Gene

Variant ID Type Subtype PubMed ID
dgv7935n71 CNV Loss 21882294
dgv7938n71 CNV Loss 21882294
dgv7939n71 CNV Loss 21882294
dgv7940n71 CNV Loss 21882294
nsv891747 CNV Loss 21882294
nsv466007 CNV Loss 19166990
esv2738031 CNV Deletion 23290073
esv2738032 CNV Deletion 23290073
esv2738033 CNV Deletion 23290073
esv2738034 CNV Deletion 23290073
nsv519816 CNV Loss 19592680

Relevant External Links for ZNF707 Gene

HapMap Linkage Disequilibrium report
ZNF707

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF707 Gene

Disorders for ZNF707 Gene

No disorders were found for ZNF707 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ZNF707 Gene

Publications for ZNF707 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Human ORFeome version 1.1: a platform for reverse proteomics. (PMID: 15489335) Rual J.F. … Vidal M. (Genome Res. 2004) 3
  5. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3

Products for ZNF707 Gene

Sources for ZNF707 Gene

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