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Aliases for ZNF674-AS1 Gene

Subcategory (RNA class) for ZNF674-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF674-AS1 Gene

  • ZNF674 Antisense RNA 1 (Head To Head) 2 3 5
  • ZNF674 Antisense RNA 1 (Non-Protein Coding) 2
  • ZNF674 Antisense RNA 1 2

External Ids for ZNF674-AS1 Gene

Previous GeneCards Identifiers for ZNF674-AS1 Gene

  • GC0XP046406

Summaries for ZNF674-AS1 Gene

GeneCards Summary for ZNF674-AS1 Gene

ZNF674-AS1 (ZNF674 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF674-AS1 Gene

Genomics for ZNF674-AS1 Gene

Regulatory Elements for ZNF674-AS1 Gene

Enhancers for ZNF674-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF047216 1.1 ENCODE 28.5 +673.0 673029 5.0 HDGF PKNOX1 WRNIP1 SIN3A DMAP1 FEZF1 ZNF2 YY1 ZNF207 ZNF143 LOC100113397 ZNF674-AS1 LINC01560 ZNF81 ZNF182 INE1 UXT-AS1 LOC100419232 SNORA11C ZNF674
GH0XF045798 1.5 FANTOM5 Ensembl ENCODE 15.6 -740.8 -740827 12.3 CTCF PKNOX1 JUN TEAD4 SIN3A MAX ZNF384 CEBPG RAD21 ZNF316 ZNF674-AS1 ZNF674 MIR222HG LOC401585
GH0XF046544 1.1 ENCODE 12.7 +1.0 986 4.6 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 LOC100113397 INE1 LINC01560 LOC392452 SLC9A7 ZNF674-AS1 NUS1P1 KRBOX4 ENSG00000277721
GH0XF047190 1 ENCODE 11.4 +645.8 645780 2.3 CREB3L1 ARID4B SIN3A BRCA1 ZNF2 ETS1 ZNF143 ZNF263 SP3 MXD4 LOC100113397 ZNF674-AS1 LINC01560 ZNF182 ZNF674 ZNF630 INE1 UBA1
GH0XF046551 0.9 Ensembl ENCODE 0.4 +6.8 6793 2.0 HIC1 PKNOX1 JUND NCOR1 GLIS1 ZNF600 PRDM1 MAFK SLC9A7 KRBOX4 ENSG00000277721 ZNF674-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF674-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF674-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001489782 210 2601 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143

Genomic Location for ZNF674-AS1 Gene

Chromosome:
X
Start:
46,545,490 bp from pter
End:
46,548,475 bp from pter
Size:
2,986 bases
Orientation:
Plus strand

Genomic View for ZNF674-AS1 Gene

Genes around ZNF674-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF674-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF674-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF674-AS1 Gene

Proteins for ZNF674-AS1 Gene

Post-translational modifications for ZNF674-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF674-AS1 Gene

Domains & Families for ZNF674-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF674-AS1 Gene

Function for ZNF674-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF674-AS1 Gene

Localization for ZNF674-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF674-AS1 Gene

Pathways & Interactions for ZNF674-AS1 Gene

SuperPathways for ZNF674-AS1 Gene

No Data Available

Interacting Proteins for ZNF674-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF674-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF674-AS1 Gene

Transcripts for ZNF674-AS1 Gene

mRNA/cDNA for ZNF674-AS1 Gene

Unigene Clusters for ZNF674-AS1 Gene

ZNF674 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF674-AS1 Gene

No ASD Table

Relevant External Links for ZNF674-AS1 Gene

GeneLoc Exon Structure for
ZNF674-AS1
ECgene alternative splicing isoforms for
ZNF674-AS1

Expression for ZNF674-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF674-AS1 Gene

SOURCE GeneReport for Unigene cluster for ZNF674-AS1 Gene:

Hs.729370
genes like me logo Genes that share expression patterns with ZNF674-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF674-AS1 Gene

Orthologs for ZNF674-AS1 Gene

Evolution for ZNF674-AS1 Gene

ENSEMBL:
Gene Tree for ZNF674-AS1 (if available)
TreeFam:
Gene Tree for ZNF674-AS1 (if available)

No data available for Orthologs for ZNF674-AS1 Gene

Paralogs for ZNF674-AS1 Gene

No data available for Paralogs for ZNF674-AS1 Gene

Variants for ZNF674-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF674-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs113649194 -- 46,548,960(+) ACTCT(A/G)TCTCC downstream-variant-500B
rs12014472 -- 46,548,495(+) TTCTC(A/G)GTGTT downstream-variant-500B
rs12388857 -- 46,545,950(+) AGGTC(C/T)GGCTC intron-variant, upstream-variant-2KB
rs139620268 -- 46,547,181(+) TAAAT(A/G)TTAGT nc-transcript-variant, upstream-variant-2KB
rs139701331 -- 46,547,600(+) CCTCC(C/T)GAGTG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF674-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3576853 CNV gain 25503493

Relevant External Links for ZNF674-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF674-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF674-AS1 Gene

Disorders for ZNF674-AS1 Gene

Relevant External Links for ZNF674-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF674-AS1

No disorders were found for ZNF674-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF674-AS1 Gene

Publications for ZNF674-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF674-AS1 Gene

Sources for ZNF674-AS1 Gene

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