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Aliases for ZNF672 Gene

Aliases for ZNF672 Gene

  • Zinc Finger Protein 672 2 3
  • Hypothetical Protein FLJ22301 2

External Ids for ZNF672 Gene

Summaries for ZNF672 Gene

GeneCards Summary for ZNF672 Gene

ZNF672 (Zinc Finger Protein 672) is a Protein Coding gene.

UniProtKB/Swiss-Prot for ZNF672 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF672 Gene

Genomics for ZNF672 Gene

Genomic Location for ZNF672 Gene

Start:
248,838,210 bp from pter
End:
248,849,517 bp from pter
Size:
11,308 bases
Orientation:
Plus strand

Genomic View for ZNF672 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF672 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF672 Gene

Regulatory Elements for ZNF672 Gene

Proteins for ZNF672 Gene

  • Protein details for ZNF672 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q499Z4-ZN672_HUMAN
    Recommended name:
    Zinc finger protein 672
    Protein Accession:
    Q499Z4
    Secondary Accessions:
    • Q96H65
    • Q96IM3
    • Q9H6G5

    Protein attributes for ZNF672 Gene

    Size:
    452 amino acids
    Molecular mass:
    50224 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF672 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF672 Gene

Proteomics data for ZNF672 Gene at MOPED

Post-translational modifications for ZNF672 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF672 Gene

No data available for DME Specific Peptides for ZNF672 Gene

Domains for ZNF672 Gene

Gene Families for ZNF672 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF672 Gene

Suggested Antigen Peptide Sequences for ZNF672 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q499Z4

UniProtKB/Swiss-Prot:

ZN672_HUMAN
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q499Z4
Similarity:
  • Contains 14 C2H2-type zinc fingers.:
    • Q499Z4
genes like me logo Genes that share domains with ZNF672: view

Function for ZNF672 Gene

Molecular function for ZNF672 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF672 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF672: view

miRNA for ZNF672 Gene

miRTarBase miRNAs that target ZNF672

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF672 Gene

Localization for ZNF672 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF672 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF672 Gene COMPARTMENTS Subcellular localization image for ZNF672 gene
Compartment Confidence
nucleus 4

Gene Ontology (GO) - Cellular Components for ZNF672 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF672: view

Pathways for ZNF672 Gene

SuperPathways for ZNF672 Gene

No Data Available

Interacting Proteins for ZNF672 Gene

Gene Ontology (GO) - Biological Process for ZNF672 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF672: view

No data available for Pathways by source for ZNF672 Gene

Transcripts for ZNF672 Gene

Unigene Clusters for ZNF672 Gene

Zinc finger protein 672:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF672 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9a · 9b · 9c
SP1: - - - - - - - - -
SP2: - - - - - - -
SP3: - - - - - - - -
SP4: - - - -
SP5: - -
SP6: - - - - - -
SP7: - - - -
SP8: -

Relevant External Links for ZNF672 Gene

GeneLoc Exon Structure for
ZNF672
ECgene alternative splicing isoforms for
ZNF672

Expression for ZNF672 Gene

mRNA expression in normal human tissues for ZNF672 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF672 Gene

SOURCE GeneReport for Unigene cluster for ZNF672 Gene Hs.521151

genes like me logo Genes that share expressions with ZNF672: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF672 Gene

Orthologs for ZNF672 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF672 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF672 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF672 35
  • 80.93 (n)
  • 82.26 (a)
ZNF672 36
  • 80 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF672 35
  • 79.57 (n)
  • 78.08 (a)
ZNF672 36
  • 78 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp672 35
  • 75.09 (n)
  • 77.61 (a)
Zfp672 16
Zfp672 36
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZNF672 36
  • 64 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zfp672 35
  • 74.35 (n)
  • 77.83 (a)
Species with no ortholog for ZNF672:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF672 Gene

ENSEMBL:
Gene Tree for ZNF672 (if available)
TreeFam:
Gene Tree for ZNF672 (if available)

Paralogs for ZNF672 Gene

Selected SIMAP similar genes for ZNF672 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with ZNF672: view

No data available for Paralogs for ZNF672 Gene

Variants for ZNF672 Gene

Sequence variations from dbSNP and Humsavar for ZNF672 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs2511 -- 248,849,447(-) TCCAT(A/C)CTGCC utr-variant-3-prime
rs13985 -- 248,848,186(-) GTGTG(A/G)ATGCG reference, synonymous-codon
rs1138456 -- 248,849,433(+) ACCAG(A/C)AGGGA utr-variant-3-prime
rs1138457 -- 248,848,410(+) CGTCG(A/C)CTCCA missense, reference
rs4271253 -- 248,847,007(+) CCATT(C/T)CTTAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF672 Gene

Variant ID Type Subtype PubMed ID
esv2750832 CNV Gain 17911159
esv2750835 CNV Gain 17911159
nsv5398 CNV Insertion 18451855

Relevant External Links for ZNF672 Gene

HapMap Linkage Disequilibrium report
ZNF672

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF672 Gene

Disorders for ZNF672 Gene

No disorders were found for ZNF672 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF672 Gene

Publications for ZNF672 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3

Products for ZNF672 Gene

  • antibodies-online peptides for ZNF672
  • antibodies-online antibodies for ZNF672
  • antibodies-online kits for ZNF672

Sources for ZNF672 Gene

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