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Aliases for ZNF671 Gene

Aliases for ZNF671 Gene

  • Zinc Finger Protein 671 2 3
  • Hypothetical Protein FLJ23506 2

External Ids for ZNF671 Gene

Previous GeneCards Identifiers for ZNF671 Gene

  • GC19M062923
  • GC19M058231
  • GC19M054543

Summaries for ZNF671 Gene

GeneCards Summary for ZNF671 Gene

ZNF671 (Zinc Finger Protein 671) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF17.

UniProtKB/Swiss-Prot for ZNF671 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF671 Gene

Genomics for ZNF671 Gene

Regulatory Elements for ZNF671 Gene

Transcription factor binding sites by QIAGEN in the ZNF671 gene promoter:

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF671 Gene

Start:
57,719,751 bp from pter
End:
57,727,627 bp from pter
Size:
7,877 bases
Orientation:
Minus strand

Genomic View for ZNF671 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF671 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF671 Gene

Proteins for ZNF671 Gene

  • Protein details for ZNF671 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TAW3-ZN671_HUMAN
    Recommended name:
    Zinc finger protein 671
    Protein Accession:
    Q8TAW3
    Secondary Accessions:
    • A6NF07
    • Q9H5E9

    Protein attributes for ZNF671 Gene

    Size:
    534 amino acids
    Molecular mass:
    60972 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH25728.1; Type=Frameshift; Positions=534; Evidence={ECO:0000305};

neXtProt entry for ZNF671 Gene

Proteomics data for ZNF671 Gene at MOPED

Post-translational modifications for ZNF671 Gene

  • Ubiquitination at Lys381
  • Modification sites at PhosphoSitePlus

Other Protein References for ZNF671 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF671 Gene

Domains for ZNF671 Gene

Gene Families for ZNF671 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF671 Gene

Suggested Antigen Peptide Sequences for ZNF671 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8TAW3

UniProtKB/Swiss-Prot:

ZN671_HUMAN :
  • Q8TAW3
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 10 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF671: view

Function for ZNF671 Gene

Molecular function for ZNF671 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF671 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003712 transcription cofactor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF671: view

Phenotypes for ZNF671 Gene

GenomeRNAi human phenotypes for ZNF671:
genes like me logo Genes that share phenotypes with ZNF671: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF671

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF671 Gene

Localization for ZNF671 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF671 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF671 Gene COMPARTMENTS Subcellular localization image for ZNF671 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF671 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IBA --
genes like me logo Genes that share ontologies with ZNF671: view

Pathways for ZNF671 Gene

SuperPathways for ZNF671 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF671: view

Pathways by source for ZNF671 Gene

2 Reactome pathways for ZNF671 Gene

Gene Ontology (GO) - Biological Process for ZNF671 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated --
GO:0006357 regulation of transcription from RNA polymerase II promoter IBA --
genes like me logo Genes that share ontologies with ZNF671: view

Transcripts for ZNF671 Gene

Unigene Clusters for ZNF671 Gene

Zinc finger protein 671:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF671

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF671 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7a · 7b
SP1: - -
SP2: - - -
SP3: - - - - -
SP4: - - - -
SP5: - -
SP6: -

Relevant External Links for ZNF671 Gene

GeneLoc Exon Structure for
ZNF671
ECgene alternative splicing isoforms for
ZNF671

Expression for ZNF671 Gene

mRNA expression in normal human tissues for ZNF671 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF671 Gene

SOURCE GeneReport for Unigene cluster for ZNF671 Gene Hs.180402

genes like me logo Genes that share expressions with ZNF671: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF671 Gene

Orthologs for ZNF671 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ZNF671 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF671 35
  • 99.5 (n)
  • 99.06 (a)
ZNF671 36
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF671 35
  • 79.72 (n)
  • 74.38 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes MET31 38
Species with no ortholog for ZNF671:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF671 Gene

ENSEMBL:
Gene Tree for ZNF671 (if available)
TreeFam:
Gene Tree for ZNF671 (if available)

Paralogs for ZNF671 Gene

Selected SIMAP similar genes for ZNF671 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZNF671: view

Variants for ZNF671 Gene

Sequence variations from dbSNP and Humsavar for ZNF671 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs1059397 -- 57,720,173(-) GAGTG(C/T)CAAGT utr-variant-3-prime
rs1544358 -- 57,722,850(+) AGATC(A/G)TGCCA intron-variant
rs2239985 -- 57,719,563(+) CCCTG(A/C)AGTCT downstream-variant-500B
rs2239986 -- 57,720,439(+) AAGTC(A/G)GGGGC utr-variant-3-prime
rs3062203 -- 57,724,527(-) aaaaa(-/AA)Ttgtt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF671 Gene

Variant ID Type Subtype PubMed ID
nsv912528 CNV Gain 21882294

Relevant External Links for ZNF671 Gene

HapMap Linkage Disequilibrium report
ZNF671

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF671 Gene

Disorders for ZNF671 Gene

No disorders were found for ZNF671 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF671 Gene

Publications for ZNF671 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3

Products for ZNF671 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF671
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF671
    • Block miRNA regulation of ZNF671 using miScript Target Protectors

    Sources for ZNF671 Gene

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