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Aliases for ZNF667-AS1 Gene

Subcategory (RNA class) for ZNF667-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF667-AS1 Gene

  • ZNF667 Antisense RNA 1 (Head To Head) 2 3 5
  • MORT 3

External Ids for ZNF667-AS1 Gene

Previous GeneCards Identifiers for ZNF667-AS1 Gene

  • GC19P056994

Summaries for ZNF667-AS1 Gene

GeneCards Summary for ZNF667-AS1 Gene

ZNF667-AS1 (ZNF667 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with ZNF667-AS1 include Aorta Angiosarcoma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF667-AS1 Gene

Genomics for ZNF667-AS1 Gene

Regulatory Elements for ZNF667-AS1 Gene

Enhancers for ZNF667-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F056476 0.2 ENCODE 34.7 +0.2 208 2.8 ZNF76 SIN3A ETS1 YY1 GLIS2 FOS KLF7 ZNF548 EGR2 ZNF280D ZNF667-AS1 ZNF667 ZNF264 U2AF2 ZNF543 ENSG00000267523 ZNF582-AS1 ZNF805 ZNF17 ZNF460
GH19F055519 1 FANTOM5 Ensembl ENCODE 18.4 -957.0 -957041 1.0 HDGF ATF1 ZNF493 ZNF133 GLI4 YBX1 ZNF416 ZNF548 FOS MCM3 FIZ1 ZNF580 NAT14 U2AF2 SHISA7 ZNF667 ZNF667-AS1 SSC5D SBK3 LOC100506374
GH19F055503 1.1 Ensembl ENCODE 18.4 -973.3 -973282 1.6 PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZNF416 ZNF143 ZNF548 U2AF2 ZNF667 FIZ1 ZNF667-AS1 NAT14 LOC100506374 ZNF580 ZNF582-AS1 ENSG00000267523 KMT5C
GH19F055671 1.1 ENCODE 15.7 -800.7 -800748 10.0 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ZNF766 ZNF583 ZNF470 ZNF582-AS1 ENSG00000269696 ZNF542P ZNF667-AS1 ENSG00000267224 ZFP28 ZNF667 LOC729999
GH19F057361 1 ENCODE 12.1 +885.7 885732 3.2 HDGF PKNOX1 ATF1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 BRCA1 ZNF2 ZNF548 ZNF304 ZFP28 ZNF667 ZIM2 ZNF667-AS1 PEG3 SMIM17 ZNF805 ZNF470
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF667-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF667-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000349133 750 2800 ZFP64 ZNF76 SIN3A ETS1 YY1 FOS KLF7 ZNF548 EGR2 ZNF280D

Genomic Location for ZNF667-AS1 Gene

Chromosome:
19
Start:
56,477,250 bp from pter
End:
56,500,666 bp from pter
Size:
23,417 bases
Orientation:
Plus strand

Genomic View for ZNF667-AS1 Gene

Genes around ZNF667-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF667-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF667-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF667-AS1 Gene

Proteins for ZNF667-AS1 Gene

Post-translational modifications for ZNF667-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF667-AS1 Gene

Domains & Families for ZNF667-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF667-AS1 Gene

Function for ZNF667-AS1 Gene

Phenotypes for ZNF667-AS1 Gene

genes like me logo Genes that share phenotypes with ZNF667-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF667-AS1 Gene

Localization for ZNF667-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF667-AS1 Gene

Pathways & Interactions for ZNF667-AS1 Gene

SuperPathways for ZNF667-AS1 Gene

No Data Available

Interacting Proteins for ZNF667-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF667-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF667-AS1 Gene

Transcripts for ZNF667-AS1 Gene

mRNA/cDNA for ZNF667-AS1 Gene

(1) REFSEQ mRNAs :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF667-AS1 Gene

No ASD Table

Relevant External Links for ZNF667-AS1 Gene

GeneLoc Exon Structure for
ZNF667-AS1
ECgene alternative splicing isoforms for
ZNF667-AS1

Expression for ZNF667-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF667-AS1 Gene

genes like me logo Genes that share expression patterns with ZNF667-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF667-AS1 Gene

Orthologs for ZNF667-AS1 Gene

Evolution for ZNF667-AS1 Gene

ENSEMBL:
Gene Tree for ZNF667-AS1 (if available)
TreeFam:
Gene Tree for ZNF667-AS1 (if available)

No data available for Orthologs for ZNF667-AS1 Gene

Paralogs for ZNF667-AS1 Gene

No data available for Paralogs for ZNF667-AS1 Gene

Variants for ZNF667-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF667-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10404345 -- 56,483,556(+) CTCAT(A/G)AGCTA intron-variant
rs10408147 -- 56,487,878(+) TAGAA(C/T)CATTA intron-variant, nc-transcript-variant
rs10411554 -- 56,476,191(+) ccaga(C/G)agcgg intron-variant, upstream-variant-2KB
rs10412827 -- 56,484,515(+) ccacg(G/T)ggatt intron-variant
rs10412888 -- 56,476,061(+) ACTTA(G/T)GCTCA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF667-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv6591n54 CNV loss 21841781
nsv1055357 CNV gain 25217958

Relevant External Links for ZNF667-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF667-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF667-AS1 Gene

Disorders for ZNF667-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ZNF667-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
aorta angiosarcoma
  • aortic hemangiosarcoma
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for ZNF667-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF667-AS1
genes like me logo Genes that share disorders with ZNF667-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ZNF667-AS1 Gene

Publications for ZNF667-AS1 Gene

  1. A lincRNA connected to cell mortality and epigenetically-silenced in most common human cancers. (PMID: 26646903) Vrba L. … Futscher B.W. (Epigenetics 2015) 2 3 64
  2. The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease. (PMID: 24705354) Butland S.L. … Hayden M.R. (Hum. Mol. Genet. 2014) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF667-AS1 Gene

Sources for ZNF667-AS1 Gene

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