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Aliases for ZNF667-AS1 Gene

Subcategory (RNA class) for ZNF667-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF667-AS1 Gene

  • ZNF667 Antisense RNA 1 (Head To Head) 2 3 5
  • Mortal Obligate RNA Transcript 2 3
  • MORT 3

External Ids for ZNF667-AS1 Gene

Previous GeneCards Identifiers for ZNF667-AS1 Gene

  • GC19P056994

Summaries for ZNF667-AS1 Gene

GeneCards Summary for ZNF667-AS1 Gene

ZNF667-AS1 (ZNF667 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with ZNF667-AS1 include Aorta Angiosarcoma.

Additional gene information for ZNF667-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF667-AS1 Gene

Genomics for ZNF667-AS1 Gene

Regulatory Elements for ZNF667-AS1 Gene

Enhancers for ZNF667-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H055503 1.3 Ensembl ENCODE 48.6 -973.3 -973282 1 PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 CBX5 ZNF416 ZNF143 ZNF548 U2AF2 FIZ1 ZNF667 ZNF582-AS1 NAT14 ZNF667-AS1 ZNF542P ZNF582 ZNF583 ENSG00000267523
GH19H055519 1.6 FANTOM5 Ensembl ENCODE 33.8 -957.0 -957041 0 HDGF ATF1 ZNF493 ZNF133 YBX1 GLI4 ZNF416 FOS ZNF548 ATF7 U2AF2 ZNF471 FIZ1 ZNF582 ZNF581 ZNF580 SSC5D ENSG00000267523 NAT14 ZNF667
GH19H056594 1 ENCODE 39.4 +118.2 118191 1 HDGF PKNOX1 ZNF133 ARID4B SIN3A FEZF1 YBX1 GLI4 YY1 ETS1 U2AF2 ZNF17 ZNF264 ZNF773 ZNF543 ZNF549 ENSG00000269696 ZNF550 ZFP28 ZNF470
GH19H056403 1.1 ENCODE 28.9 -73.1 -73101 2 HDGF ARNT ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF416 ZNF143 ZNF207 ZNF582-AS1 ZNF582 ZFP28 ZNF264 ZNF470 ZNF471 FIZ1 U2AF2 ZNF548 LOC105372476
GH19H056476 0.9 ENCODE 34.7 +0.2 208 2 ATF1 ZNF76 YY1 ETS1 GLIS2 FOS KLF7 ZNF548 EGR2 SP3 ZNF667-AS1 ZNF667 ZNF264 SSC5D U2AF2 ZNF543 ENSG00000267523 ZNF582-AS1 ZNF805 ZNF17
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF667-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF667-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000111756 650 2600 ZNF76 RAD21 YY1 ETS1 FOS KLF7 ZNF548 EGR2 SP3 ZNF280D

Genomic Location for ZNF667-AS1 Gene

Chromosome:
19
Start:
56,477,250 bp from pter
End:
56,500,666 bp from pter
Size:
23,417 bases
Orientation:
Plus strand

Genomic View for ZNF667-AS1 Gene

Genes around ZNF667-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF667-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF667-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF667-AS1 Gene

Proteins for ZNF667-AS1 Gene

Post-translational modifications for ZNF667-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF667-AS1 Gene

Domains & Families for ZNF667-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF667-AS1 Gene

Function for ZNF667-AS1 Gene

Phenotypes From GWAS Catalog for ZNF667-AS1 Gene

Phenotypes for ZNF667-AS1 Gene

genes like me logo Genes that share phenotypes with ZNF667-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF667-AS1 Gene

Localization for ZNF667-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF667-AS1 Gene

Pathways & Interactions for ZNF667-AS1 Gene

SuperPathways for ZNF667-AS1 Gene

No Data Available

Interacting Proteins for ZNF667-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF667-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF667-AS1 Gene

Drugs & Compounds for ZNF667-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF667-AS1 Gene

mRNA/cDNA for ZNF667-AS1 Gene

(1) REFSEQ mRNAs :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF667-AS1 Gene

No ASD Table

Relevant External Links for ZNF667-AS1 Gene

GeneLoc Exon Structure for
ZNF667-AS1
ECgene alternative splicing isoforms for
ZNF667-AS1

Expression for ZNF667-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF667-AS1 Gene

genes like me logo Genes that share expression patterns with ZNF667-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF667-AS1 Gene

Orthologs for ZNF667-AS1 Gene

Evolution for ZNF667-AS1 Gene

ENSEMBL:
Gene Tree for ZNF667-AS1 (if available)
TreeFam:
Gene Tree for ZNF667-AS1 (if available)

No data available for Orthologs for ZNF667-AS1 Gene

Paralogs for ZNF667-AS1 Gene

No data available for Paralogs for ZNF667-AS1 Gene

Variants for ZNF667-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF667-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000034281 -- 56,477,642(+) TCAGG(A/C)GATCA upstream-variant-2KB
rs1000083984 -- 56,486,623(+) ATATA(A/G)AACCA intron-variant
rs1000178068 -- 56,480,886(+) ACAGC(A/G)TCCAC intron-variant
rs1000247853 -- 56,479,955(+) TCCCC(A/C)CCTGC intron-variant
rs1000341767 -- 56,493,588(+) ATTTA(C/T)AAAAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF667-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv6591n54 CNV loss 21841781
nsv1055357 CNV gain 25217958

Relevant External Links for ZNF667-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF667-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF667-AS1 Gene

Disorders for ZNF667-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ZNF667-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
aorta angiosarcoma
  • aortic hemangiosarcoma
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for ZNF667-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF667-AS1
genes like me logo Genes that share disorders with ZNF667-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ZNF667-AS1 Gene

Publications for ZNF667-AS1 Gene

  1. A lincRNA connected to cell mortality and epigenetically-silenced in most common human cancers. (PMID: 26646903) Vrba L … Futscher BW (Epigenetics 2015) 2 3 60
  2. The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease. (PMID: 24705354) Butland SL … Hayden MR (Human molecular genetics 2014) 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ZNF667-AS1 Gene

Sources for ZNF667-AS1 Gene

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