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Aliases for ZNF630-AS1 Gene

Subcategory (RNA class) for ZNF630-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF630-AS1 Gene

  • ZNF630 Antisense RNA 1 2 3 5
  • ZNF630 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZNF630-AS1 Gene

Previous GeneCards Identifiers for ZNF630-AS1 Gene

  • GC00U933357
  • GC0XP047916

Summaries for ZNF630-AS1 Gene

GeneCards Summary for ZNF630-AS1 Gene

ZNF630-AS1 (ZNF630 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF630-AS1 Gene

Genomics for ZNF630-AS1 Gene

Regulatory Elements for ZNF630-AS1 Gene

Enhancers for ZNF630-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG048020 1.5 FANTOM5 Ensembl ENCODE 0.3 -34.9 -34885 2.1 TBP PKNOX1 FOXA2 WRNIP1 ZNF76 KLF17 SIN3A RAD21 BRCA1 ZNF2 ZNF182 LINC01560 ZNF630 SYN1 PIR35699 ZNF630-AS1
GH0XG048045 0.9 Ensembl ENCODE 0.4 -10.2 -10229 1.7 FOSL1 JUND ATF3 IKZF1 JUN CREB1 FOXP2 FOS ZNF630 INE1 ZNF630-AS1 PIR35699
GH0XG048070 0.9 ENCODE 0.4 +15.3 15345 1.7 HDGF PKNOX1 ATF1 SIN3A ZNF76 FEZF1 ZBTB40 YY1 GLIS2 EGR1 ZNF630 ZNF630-AS1
GH0XG048026 1 Ensembl ENCODE 0.3 -29.5 -29510 0.4 CTCF ESRRA RB1 RAD21 RFX5 ZNF143 SMC3 NFE2 CREM NFE2L2 ZNF630 PIR35699 ZNF630-AS1
GH0XG048025 0.9 Ensembl ENCODE 0.3 -30.4 -30410 0.6 CTCF ZNF654 STAT1 REST ATF2 RAD21 ZNF121 ZBTB48 SMC3 ZNF630 PIR35699 ZNF630-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF630-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF630-AS1 Gene

Chromosome:
X
Start:
48,056,310 bp from pter
End:
48,066,583 bp from pter
Size:
10,274 bases
Orientation:
Plus strand

Genomic View for ZNF630-AS1 Gene

Genes around ZNF630-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF630-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF630-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF630-AS1 Gene

Proteins for ZNF630-AS1 Gene

Post-translational modifications for ZNF630-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF630-AS1 Gene

Domains & Families for ZNF630-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF630-AS1 Gene

Function for ZNF630-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF630-AS1 Gene

Localization for ZNF630-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF630-AS1 Gene

Pathways & Interactions for ZNF630-AS1 Gene

SuperPathways for ZNF630-AS1 Gene

No Data Available

Interacting Proteins for ZNF630-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF630-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF630-AS1 Gene

Drugs & Compounds for ZNF630-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF630-AS1 Gene

mRNA/cDNA for ZNF630-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF630-AS1 Gene

No ASD Table

Relevant External Links for ZNF630-AS1 Gene

GeneLoc Exon Structure for
ZNF630-AS1
ECgene alternative splicing isoforms for
ZNF630-AS1

Expression for ZNF630-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF630-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF630-AS1 Gene

This gene is overexpressed in Ovary (x6.1).
genes like me logo Genes that share expression patterns with ZNF630-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF630-AS1 Gene

Orthologs for ZNF630-AS1 Gene

Evolution for ZNF630-AS1 Gene

ENSEMBL:
Gene Tree for ZNF630-AS1 (if available)
TreeFam:
Gene Tree for ZNF630-AS1 (if available)

No data available for Orthologs for ZNF630-AS1 Gene

Paralogs for ZNF630-AS1 Gene

No data available for Paralogs for ZNF630-AS1 Gene

Variants for ZNF630-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF630-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000455425 -- 48,062,654(+) GCTTG(A/T)ACCCA intron-variant
rs1000923691 -- 48,055,631(+) TCGAG(A/T)CCATC upstream-variant-2KB
rs1001351347 -- 48,055,282(+) TCTCC(A/T)CTAAA upstream-variant-2KB
rs1001467389 -- 48,064,555(+) CCTCC(C/T)GGGCT intron-variant
rs1001772490 -- 48,064,791(+) TGATT(A/G)AAAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF630-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv17n29 CNV gain+loss 16826518
dgv2286e212 CNV gain 25503493
dgv2287e212 CNV loss 25503493
dgv268e55 CNV loss 17911159
dgv37n14 CNV gain 18776910
esv25781 CNV gain 19812545
esv2752324 CNV gain 17911159
esv2758866 CNV gain+loss 17122850
esv32909 CNV gain+loss 17666407
esv3380999 CNV duplication 20981092
esv3389425 CNV duplication 20981092
esv3426243 CNV duplication 20981092
esv34308 CNV gain 17911159
esv34932 CNV gain 17911159
nsv438131 CNV loss 16468122
nsv442804 CNV gain+loss 18776908
nsv470351 CNV loss 18288195
nsv470352 CNV gain 18288195
nsv471601 CNV gain 15918152
nsv515199 CNV gain+loss 21397061
nsv517350 CNV gain+loss 19592680
nsv519165 CNV loss 19592680
nsv521227 CNV gain 19592680
nsv522886 CNV gain 19592680
nsv6890 CNV deletion 18451855
nsv818025 CNV gain+loss 17921354
nsv9940 CNV gain 18304495

Relevant External Links for ZNF630-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF630-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF630-AS1 Gene

Disorders for ZNF630-AS1 Gene

Relevant External Links for ZNF630-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF630-AS1

No disorders were found for ZNF630-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF630-AS1 Gene

Publications for ZNF630-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for ZNF630-AS1 Gene

Sources for ZNF630-AS1 Gene

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