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Aliases for ZNF613 Gene

Aliases for ZNF613 Gene

  • Zinc Finger Protein 613 2 3

External Ids for ZNF613 Gene

Previous GeneCards Identifiers for ZNF613 Gene

  • GC19P057123
  • GC19P057125
  • GC19P052430
  • GC19P048761

Summaries for ZNF613 Gene

GeneCards Summary for ZNF613 Gene

ZNF613 (Zinc Finger Protein 613) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF182.

UniProtKB/Swiss-Prot for ZNF613 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF613 Gene

Genomics for ZNF613 Gene

Regulatory Elements for ZNF613 Gene

Transcription factor binding sites by QIAGEN in the ZNF613 gene promoter:

Genomic Location for ZNF613 Gene

Start:
51,879,872 bp from pter
End:
51,948,759 bp from pter
Size:
68,888 bases
Orientation:
Plus strand

Genomic View for ZNF613 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF613 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF613 Gene

Proteins for ZNF613 Gene

  • Protein details for ZNF613 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6PF04-ZN613_HUMAN
    Recommended name:
    Zinc finger protein 613
    Protein Accession:
    Q6PF04
    Secondary Accessions:
    • Q96SS9

    Protein attributes for ZNF613 Gene

    Size:
    617 amino acids
    Molecular mass:
    70143 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF613 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF613 Gene

Proteomics data for ZNF613 Gene at MOPED

Post-translational modifications for ZNF613 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF613 Gene

No data available for DME Specific Peptides for ZNF613 Gene

Domains for ZNF613 Gene

Gene Families for ZNF613 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Suggested Antigen Peptide Sequences for ZNF613 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6PF04

UniProtKB/Swiss-Prot:

ZN613_HUMAN :
  • Q6PF04
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 12 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF613: view

Function for ZNF613 Gene

Molecular function for ZNF613 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF613 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF613: view

Phenotypes for ZNF613 Gene

GenomeRNAi human phenotypes for ZNF613:
genes like me logo Genes that share phenotypes with ZNF613: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF613

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF613 Gene

Localization for ZNF613 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF613 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF613 Gene COMPARTMENTS Subcellular localization image for ZNF613 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF613 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF613: view

Pathways for ZNF613 Gene

SuperPathways for ZNF613 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF613: view

Pathways by source for ZNF613 Gene

2 Reactome pathways for ZNF613 Gene

Interacting Proteins for ZNF613 Gene

Gene Ontology (GO) - Biological Process for ZNF613 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF613: view

Transcripts for ZNF613 Gene

Unigene Clusters for ZNF613 Gene

Zinc finger protein 613:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF613

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ZNF613
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF613 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8a · 8b · 8c · 8d
SP1: - - - -
SP2: - -
SP3: - - - -
SP4: - - - - -
SP5: - - - -
SP6: - -
SP7: - - - -
SP8:
SP9: - - - - - -

Relevant External Links for ZNF613 Gene

GeneLoc Exon Structure for
ZNF613
ECgene alternative splicing isoforms for
ZNF613

Expression for ZNF613 Gene

mRNA expression in normal human tissues for ZNF613 Gene

SOURCE GeneReport for Unigene cluster for ZNF613 Gene Hs.183390

genes like me logo Genes that share expressions with ZNF613: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ZNF613 Gene

Orthologs for ZNF613 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF613 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF613 35
  • 99.68 (n)
  • 99.51 (a)
ZNF613 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF613 35
  • 82.36 (n)
  • 75.32 (a)
ZNF613 36
  • 72 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF613 35
  • 84.36 (n)
  • 78.83 (a)
ZNF613 36
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp157 35
  • 59.86 (n)
  • 50.83 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 43 (a)
ManyToMany
-- 36
  • 45 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
-- 36
  • 42 (a)
ManyToMany
-- 36
  • 45 (a)
ManyToMany
-- 36
  • 46 (a)
ManyToMany
-- 36
  • 40 (a)
ManyToMany
-- 36
  • 38 (a)
ManyToMany
-- 36
  • 44 (a)
ManyToMany
-- 36
  • 45 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 39 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Zfp157 35
  • 59.48 (n)
  • 51.26 (a)
Species with no ortholog for ZNF613:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF613 Gene

ENSEMBL:
Gene Tree for ZNF613 (if available)
TreeFam:
Gene Tree for ZNF613 (if available)

Paralogs for ZNF613 Gene

Selected SIMAP similar genes for ZNF613 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with ZNF613: view

Variants for ZNF613 Gene

Sequence variations from dbSNP and Humsavar for ZNF613 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs919779 -- 51,935,094(+) AAGCT(C/T)AGGGT intron-variant
rs4801902 -- 51,936,045(+) GACTT(C/T)AGGAG utr-variant-5-prime, intron-variant
rs6509598 -- 51,938,630(+) CCTGT(C/G)TAAGA intron-variant
rs6509599 -- 51,938,637(+) AAGAT(A/T)GTGCA intron-variant
rs6509600 -- 51,939,336(+) tttat(G/T)tattt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF613 Gene

Variant ID Type Subtype PubMed ID
esv638 CNV CNV 17122850
dgv143e55 CNV Gain 17911159
dgv1112e1 CNV Complex 17122850
dgv425n27 CNV Gain 19166990
dgv1113e1 CNV Complex 17122850
nsv833872 CNV Loss 17160897

Relevant External Links for ZNF613 Gene

HapMap Linkage Disequilibrium report
ZNF613

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF613 Gene

Disorders for ZNF613 Gene

No disorders were found for ZNF613 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF613 Gene

Publications for ZNF613 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for ZNF613 Gene

Sources for ZNF613 Gene

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