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Aliases for ZNF610 Gene

Aliases for ZNF610 Gene

  • Zinc Finger Protein 610 2 3

External Ids for ZNF610 Gene

Previous GeneCards Identifiers for ZNF610 Gene

  • GC19P057540
  • GC19P052839
  • GC19P049169

Summaries for ZNF610 Gene

GeneCards Summary for ZNF610 Gene

ZNF610 (Zinc Finger Protein 610) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF860.

UniProtKB/Swiss-Prot for ZNF610 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF610 Gene

Genomics for ZNF610 Gene

Regulatory Elements for ZNF610 Gene

Transcription factor binding sites by QIAGEN in the ZNF610 gene promoter:

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF610 Gene

Start:
52,336,245 bp from pter
End:
52,367,778 bp from pter
Size:
31,534 bases
Orientation:
Plus strand

Genomic View for ZNF610 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF610 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF610 Gene

Proteins for ZNF610 Gene

  • Protein details for ZNF610 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N9Z0-ZN610_HUMAN
    Recommended name:
    Zinc finger protein 610
    Protein Accession:
    Q8N9Z0
    Secondary Accessions:
    • A8K4C3
    • Q86YH8
    • Q8NDS9

    Protein attributes for ZNF610 Gene

    Size:
    462 amino acids
    Molecular mass:
    53489 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF610 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF610 Gene

Proteomics data for ZNF610 Gene at MOPED

Post-translational modifications for ZNF610 Gene

  • Ubiquitination at Lys412
  • Modification sites at PhosphoSitePlus

Other Protein References for ZNF610 Gene

No data available for DME Specific Peptides for ZNF610 Gene

Domains for ZNF610 Gene

Gene Families for ZNF610 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Suggested Antigen Peptide Sequences for ZNF610 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N9Z0

UniProtKB/Swiss-Prot:

ZN610_HUMAN :
  • Q8N9Z0
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 9 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF610: view

Function for ZNF610 Gene

Molecular function for ZNF610 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF610 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF610: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF610 Gene

Localization for ZNF610 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF610 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF610 Gene COMPARTMENTS Subcellular localization image for ZNF610 gene
Compartment Confidence
nucleus 4
cytosol 1
endoplasmic reticulum 1
mitochondrion 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for ZNF610 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF610: view

Pathways for ZNF610 Gene

SuperPathways for ZNF610 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF610: view

Pathways by source for ZNF610 Gene

2 Reactome pathways for ZNF610 Gene

Interacting Proteins for ZNF610 Gene

Gene Ontology (GO) - Biological Process for ZNF610 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF610: view

Transcripts for ZNF610 Gene

Unigene Clusters for ZNF610 Gene

Zinc finger protein 610:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF610

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF610 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b
SP1: -
SP2: - -
SP3:

Relevant External Links for ZNF610 Gene

GeneLoc Exon Structure for
ZNF610
ECgene alternative splicing isoforms for
ZNF610

Expression for ZNF610 Gene

mRNA expression in normal human tissues for ZNF610 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF610 Gene

SOURCE GeneReport for Unigene cluster for ZNF610 Gene Hs.147025

genes like me logo Genes that share expressions with ZNF610: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF610 Gene

Orthologs for ZNF610 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF610 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 87 (a)
ManyToMany
ZNF610 35
  • 99.28 (n)
  • 98.91 (a)
cow
(Bos Taurus)
Mammalia -- 36
  • 32 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 41 (a)
ManyToMany
Species with no ortholog for ZNF610:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF610 Gene

ENSEMBL:
Gene Tree for ZNF610 (if available)
TreeFam:
Gene Tree for ZNF610 (if available)

Paralogs for ZNF610 Gene

Selected SIMAP similar genes for ZNF610 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for ZNF610 Gene

genes like me logo Genes that share paralogs with ZNF610: view

Variants for ZNF610 Gene

Sequence variations from dbSNP and Humsavar for ZNF610 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs162117 -- 52,367,562(+) TGTGT(A/G)TGTGT downstream-variant-500B
rs162118 -- 52,367,473(-) AACAA(C/T)GCTGG downstream-variant-500B
rs162119 -- 52,366,281(+) TGTTC(A/C/G/T)GGACT synonymous-codon, reference
rs162120 -- 52,366,059(+) CATAC(C/T)GCAGA synonymous-codon, reference
rs167707 -- 52,336,691(-) CCCAG(C/T)ACAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF610 Gene

Variant ID Type Subtype PubMed ID
nsv833873 CNV Gain 17160897
nsv458742 CNV Loss 19166990
dgv3978n71 CNV Loss 21882294
esv2600634 CNV Deletion 19546169
esv2660483 CNV Deletion 23128226
dgv3979n71 CNV Loss 21882294
esv21813 CNV Gain 19812545
esv2671354 CNV Deletion 23128226
nsv2536 CNV Loss 18451855

Relevant External Links for ZNF610 Gene

HapMap Linkage Disequilibrium report
ZNF610

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF610 Gene

Disorders for ZNF610 Gene

No disorders were found for ZNF610 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF610 Gene

Publications for ZNF610 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3

Products for ZNF610 Gene

Sources for ZNF610 Gene

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