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Aliases for ZNF607 Gene

Aliases for ZNF607 Gene

  • Zinc Finger Protein 607 2 3

External Ids for ZNF607 Gene

Previous GeneCards Identifiers for ZNF607 Gene

  • GC19M042880
  • GC19M042881
  • GC19M038187
  • GC19M034637

Summaries for ZNF607 Gene

GeneCards Summary for ZNF607 Gene

ZNF607 (Zinc Finger Protein 607) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression.

UniProtKB/Swiss-Prot for ZNF607 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF607 Gene

Genomics for ZNF607 Gene

Regulatory Elements for ZNF607 Gene

Transcription factor binding sites by QIAGEN in the ZNF607 gene promoter:

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF607 Gene

Start:
37,696,363 bp from pter
End:
37,719,790 bp from pter
Size:
23,428 bases
Orientation:
Minus strand

Genomic View for ZNF607 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF607 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF607 Gene

Proteins for ZNF607 Gene

  • Protein details for ZNF607 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96SK3-ZN607_HUMAN
    Recommended name:
    Zinc finger protein 607
    Protein Accession:
    Q96SK3
    Secondary Accessions:
    • F5H141
    • Q6ZMN2
    • Q6ZMN4
    • Q96C40

    Protein attributes for ZNF607 Gene

    Size:
    696 amino acids
    Molecular mass:
    80507 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF607 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF607 Gene

Proteomics data for ZNF607 Gene at MOPED

Post-translational modifications for ZNF607 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF607 Gene

No data available for DME Specific Peptides for ZNF607 Gene

Domains for ZNF607 Gene

Gene Families for ZNF607 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Suggested Antigen Peptide Sequences for ZNF607 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96SK3

UniProtKB/Swiss-Prot:

ZN607_HUMAN :
  • Q96SK3
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 20 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF607: view

Function for ZNF607 Gene

Molecular function for ZNF607 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF607 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IBA --
GO:0005515 protein binding IPI 16189514
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF607: view

Animal Model Products

CRISPR Products

miRNA for ZNF607 Gene

miRTarBase miRNAs that target ZNF607

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF607 Gene

Localization for ZNF607 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF607 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF607 Gene COMPARTMENTS Subcellular localization image for ZNF607 gene
Compartment Confidence
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF607 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF607: view

Pathways for ZNF607 Gene

SuperPathways for ZNF607 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF607: view

Pathways by source for ZNF607 Gene

2 Reactome pathways for ZNF607 Gene

Gene Ontology (GO) - Biological Process for ZNF607 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF607: view

Transcripts for ZNF607 Gene

Unigene Clusters for ZNF607 Gene

Zinc finger protein 607:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF607

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF607 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b · 7c · 7d · 7e
SP1: - - -
SP2: -
SP3:
SP4: - -
SP5: - -
SP6: - - -

Relevant External Links for ZNF607 Gene

GeneLoc Exon Structure for
ZNF607
ECgene alternative splicing isoforms for
ZNF607

Expression for ZNF607 Gene

mRNA expression in normal human tissues for ZNF607 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF607 Gene

This gene is overexpressed in Testis (8.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF607 Gene

SOURCE GeneReport for Unigene cluster for ZNF607 Gene Hs.116622

genes like me logo Genes that share expressions with ZNF607: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ZNF607 Gene

Orthologs for ZNF607 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF607 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF607 35
  • 99.62 (n)
  • 99.57 (a)
cow
(Bos Taurus)
Mammalia LOC787397 35
  • 74.08 (n)
  • 60.06 (a)
dog
(Canis familiaris)
Mammalia LOC102156679 35
  • 73.63 (n)
  • 60.37 (a)
mouse
(Mus musculus)
Mammalia Gm13051 36
  • 41 (a)
OneToMany
Gm13150 36
  • 41 (a)
OneToMany
Gm13151 36
  • 40 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 43 (a)
OneToMany
-- 36
  • 35 (a)
OneToMany
-- 36
  • 43 (a)
OneToMany
-- 36
  • 38 (a)
OneToMany
-- 36
  • 43 (a)
OneToMany
-- 36
  • 45 (a)
OneToMany
-- 36
  • 42 (a)
OneToMany
-- 36
  • 41 (a)
OneToMany
-- 36
  • 38 (a)
OneToMany
-- 36
  • 41 (a)
OneToMany
-- 36
  • 41 (a)
OneToMany
-- 36
  • 42 (a)
OneToMany
-- 36
  • 46 (a)
OneToMany
-- 36
  • 44 (a)
OneToMany
-- 36
  • 39 (a)
OneToMany
-- 36
  • 44 (a)
OneToMany
-- 36
  • 35 (a)
OneToMany
-- 36
  • 38 (a)
OneToMany
-- 36
  • 37 (a)
OneToMany
-- 36
  • 40 (a)
OneToMany
-- 36
  • 39 (a)
OneToMany
-- 36
  • 39 (a)
OneToMany
-- 36
  • 39 (a)
OneToMany
-- 36
  • 35 (a)
OneToMany
-- 36
  • 41 (a)
OneToMany
-- 36
  • 37 (a)
OneToMany
-- 36
  • 42 (a)
OneToMany
-- 36
  • 36 (a)
OneToMany
-- 36
  • 42 (a)
OneToMany
-- 36
  • 42 (a)
OneToMany
-- 36
  • 39 (a)
OneToMany
-- 36
  • 44 (a)
OneToMany
-- 36
  • 41 (a)
OneToMany
-- 36
  • 42 (a)
OneToMany
-- 36
  • 42 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia ZNF607 36
  • 40 (a)
OneToOne
Species with no ortholog for ZNF607:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF607 Gene

ENSEMBL:
Gene Tree for ZNF607 (if available)
TreeFam:
Gene Tree for ZNF607 (if available)

Paralogs for ZNF607 Gene

Selected SIMAP similar genes for ZNF607 Gene using alignment to 5 proteins:

Pseudogenes.org Pseudogenes for ZNF607 Gene

genes like me logo Genes that share paralogs with ZNF607: view

No data available for Paralogs for ZNF607 Gene

Variants for ZNF607 Gene

Sequence variations from dbSNP and Humsavar for ZNF607 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs1060522 -- 37,720,155(+) TGACT(A/G)AAAAA upstream-variant-2KB
rs1974714 -- 37,715,560(+) AGATC(A/G)TGCCA intron-variant
rs2385005 -- 37,701,991(-) tttaa(A/T)ccatt intron-variant
rs2891656 -- 37,707,326(-) tttgt(A/G)gagac intron-variant
rs2891657 -- 37,706,183(-) agagt(C/G)ttgct intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF607 Gene

Variant ID Type Subtype PubMed ID
nsv833820 CNV Loss 17160897

Relevant External Links for ZNF607 Gene

HapMap Linkage Disequilibrium report
ZNF607
Human Gene Mutation Database (HGMD)
ZNF607

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF607 Gene

Disorders for ZNF607 Gene

Relevant External Links for ZNF607

Genetic Association Database (GAD)
ZNF607
Human Genome Epidemiology (HuGE) Navigator
ZNF607
genes like me logo Genes that share disorders with ZNF607: view

No data available for UniProtKB/Swiss-Prot for ZNF607 Gene

Publications for ZNF607 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals. (PMID: 19851296) Oguri M. … Yamada Y. (Am. J. Hypertens. 2010) 3 48
  4. Association of genetic variants with hemorrhagic stroke in Japanese individuals. (PMID: 20198315) Yoshida T. … Yamada Y. (Int. J. Mol. Med. 2010) 3 48
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for ZNF607 Gene

Sources for ZNF607 Gene

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