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Aliases for ZNF579 Gene

Aliases for ZNF579 Gene

  • Zinc Finger Protein 579 2 3

External Ids for ZNF579 Gene

Summaries for ZNF579 Gene

GeneCards Summary for ZNF579 Gene

ZNF579 (Zinc Finger Protein 579) is a Protein Coding gene.

UniProtKB/Swiss-Prot for ZNF579 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF579 Gene

Genomics for ZNF579 Gene

Genomic Location for ZNF579 Gene

Start:
55,576,770 bp from pter
End:
55,580,845 bp from pter
Size:
4,076 bases
Orientation:
Minus strand

Genomic View for ZNF579 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF579 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF579 Gene

Regulatory Elements for ZNF579 Gene

Proteins for ZNF579 Gene

  • Protein details for ZNF579 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NAF0-ZN579_HUMAN
    Recommended name:
    Zinc finger protein 579
    Protein Accession:
    Q8NAF0
    Secondary Accessions:

    Protein attributes for ZNF579 Gene

    Size:
    562 amino acids
    Molecular mass:
    60509 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF579 Gene

Proteomics data for ZNF579 Gene at MOPED

Post-translational modifications for ZNF579 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF579 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF579 Gene

Domains for ZNF579 Gene

Gene Families for ZNF579 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF579 Gene

Suggested Antigen Peptide Sequences for ZNF579 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NAF0

UniProtKB/Swiss-Prot:

ZN579_HUMAN
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q8NAF0
Similarity:
  • Contains 8 C2H2-type zinc fingers.:
    • Q8NAF0
genes like me logo Genes that share domains with ZNF579: view

Function for ZNF579 Gene

Molecular function for ZNF579 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF579 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0044822 poly(A) RNA binding IDA 22681889
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF579: view

Phenotypes for ZNF579 Gene

GenomeRNAi human phenotypes for ZNF579:
genes like me logo Genes that share phenotypes with ZNF579: view

miRNA for ZNF579 Gene

miRTarBase miRNAs that target ZNF579

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF579 Gene

Localization for ZNF579 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF579 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF579 Gene COMPARTMENTS Subcellular localization image for ZNF579 gene
Compartment Confidence
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF579 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF579: view

Pathways for ZNF579 Gene

SuperPathways for ZNF579 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF579 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF579: view

No data available for Pathways by source for ZNF579 Gene

Transcripts for ZNF579 Gene

mRNA/cDNA for ZNF579 Gene

(2) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(41) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF579 Gene

Zinc finger protein 579:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF579 Gene

No ASD Table

Relevant External Links for ZNF579 Gene

GeneLoc Exon Structure for
ZNF579
ECgene alternative splicing isoforms for
ZNF579

Expression for ZNF579 Gene

mRNA expression in normal human tissues for ZNF579 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF579 Gene

SOURCE GeneReport for Unigene cluster for ZNF579 Gene Hs.112529

genes like me logo Genes that share expressions with ZNF579: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF579 Gene

Orthologs for ZNF579 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF579 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF579 35
  • 99.55 (n)
  • 100 (a)
ZNF579 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF579 35
  • 83.76 (n)
  • 83.04 (a)
dog
(Canis familiaris)
Mammalia ZNF579 35
  • 85.4 (n)
  • 87.79 (a)
ZNF579 36
  • 31 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp579 35
  • 80.87 (n)
  • 84.63 (a)
Zfp579 16
Zfp579 36
  • 90 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zfp579 35
  • 80.61 (n)
  • 84.63 (a)
Species with no ortholog for ZNF579:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF579 Gene

ENSEMBL:
Gene Tree for ZNF579 (if available)
TreeFam:
Gene Tree for ZNF579 (if available)

Paralogs for ZNF579 Gene

Selected SIMAP similar genes for ZNF579 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ZNF579: view

No data available for Paralogs for ZNF579 Gene

Variants for ZNF579 Gene

Sequence variations from dbSNP and Humsavar for ZNF579 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs754818 -- 55,581,053(+) GTGAG(G/T)GGAGG upstream-variant-2KB
rs1053817 -- 55,577,853(-) CACCC(A/G)TCCCC utr-variant-3-prime
rs1079082 -- 55,581,433(-) CCGTA(A/G)TAGAT upstream-variant-2KB
rs1079083 -- 55,581,353(-) GGCTC(A/G)AAGTG upstream-variant-2KB
rs1079084 -- 55,581,325(-) GACAG(C/T)CAAGG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF579 Gene

Variant ID Type Subtype PubMed ID
nsv912473 CNV Loss 21882294
nsv912486 CNV Loss 21882294
dgv4025n71 CNV Loss 21882294
dgv4026n71 CNV Loss 21882294
nsv828643 CNV Loss 20364138
nsv912499 CNV Loss 21882294
nsv912500 CNV Loss 21882294

Relevant External Links for ZNF579 Gene

HapMap Linkage Disequilibrium report
ZNF579

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF579 Gene

Disorders for ZNF579 Gene

No disorders were found for ZNF579 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF579 Gene

Publications for ZNF579 Gene

  1. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PMID: 16964243) Beausoleil S.A. … Gygi S.P. (Nat. Biotechnol. 2006) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  4. Large-scale characterization of HeLa cell nuclear phosphoproteins. (PMID: 15302935) Beausoleil S.A. … Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3
  5. A directed protein interaction network for investigating intracellular signal transduction. (PMID: 21900206) Vinayagam A. … Wanker E.E. (Sci Signal 2011) 3

Products for ZNF579 Gene

Sources for ZNF579 Gene

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