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Aliases for ZNF579 Gene

Aliases for ZNF579 Gene

  • Zinc Finger Protein 579 2 3 5

External Ids for ZNF579 Gene

Previous GeneCards Identifiers for ZNF579 Gene

  • GC19M060781
  • GC19M060782
  • GC19M056088
  • GC19M052399

Summaries for ZNF579 Gene

GeneCards Summary for ZNF579 Gene

ZNF579 (Zinc Finger Protein 579) is a Protein Coding gene. GO annotations related to this gene include poly(A) RNA binding. An important paralog of this gene is FIZ1.

UniProtKB/Swiss-Prot for ZNF579 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF579 Gene

Genomics for ZNF579 Gene

Regulatory Elements for ZNF579 Gene

Enhancers for ZNF579 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F055579 0.6 ENCODE 7.8 -0.3 -301 3.3 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ZNF583 ZNF471 ZFP28 U2AF2 ZNF579 ZNF580 ZNF524
GH19F055584 0.6 Ensembl ENCODE 7.3 -5.7 -5691 3.2 ATF1 PKNOX1 ARID4B SIN3A BRCA1 ZNF121 GLIS2 ZNF263 SP3 SP5 ZNF579 ZNF580 ZNF524
GH19F055552 0.9 FANTOM5 Ensembl ENCODE 1.6 +27.9 27857 1.7 ELF3 ARID4B DMAP1 RAD21 RARA ZNF366 THAP11 CEBPB MIER2 KAT8 SSC5D ZNF579 SBK3 GC19P055562
GH19F055368 1.3 FANTOM5 ENCODE 1.4 +210.9 210909 2.9 ZNF76 KLF17 SIN3A GLI4 ZNF48 ZNF121 GLIS2 EGR1 ZNF366 SCRT2 TMEM190 RPL28 COX6B2 IL11 NAT14 ZNF579 FAM71E2
GH19F055591 0.2 ENCODE 0.4 -10.8 -10811 0.1 MBD2 JUND FOXK2 POLR2A BHLHE40 PRDM10 TCF7L2 ZNF524 ZNF579
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF579 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF579 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000349030 399 1801 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9

Genomic Location for ZNF579 Gene

Chromosome:
19
Start:
55,576,770 bp from pter
End:
55,580,899 bp from pter
Size:
4,130 bases
Orientation:
Minus strand

Genomic View for ZNF579 Gene

Genes around ZNF579 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF579 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF579 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF579 Gene

Proteins for ZNF579 Gene

  • Protein details for ZNF579 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NAF0-ZN579_HUMAN
    Recommended name:
    Zinc finger protein 579
    Protein Accession:
    Q8NAF0

    Protein attributes for ZNF579 Gene

    Size:
    562 amino acids
    Molecular mass:
    60509 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF579 Gene

Post-translational modifications for ZNF579 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF579 Gene

No data available for DME Specific Peptides for ZNF579 Gene

Domains & Families for ZNF579 Gene

Gene Families for ZNF579 Gene

Protein Domains for ZNF579 Gene

Suggested Antigen Peptide Sequences for ZNF579 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8NAF0

UniProtKB/Swiss-Prot:

ZN579_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 8 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 8 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF579: view

Function for ZNF579 Gene

Molecular function for ZNF579 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF579 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0044822 poly(A) RNA binding IDA 22681889
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF579: view
genes like me logo Genes that share phenotypes with ZNF579: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF579 Gene

Localization for ZNF579 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF579 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF579 Gene COMPARTMENTS Subcellular localization image for ZNF579 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF579 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF579: view

Pathways & Interactions for ZNF579 Gene

SuperPathways for ZNF579 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF579 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF579: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF579 Gene

Transcripts for ZNF579 Gene

mRNA/cDNA for ZNF579 Gene

Unigene Clusters for ZNF579 Gene

Zinc finger protein 579:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF579 Gene

No ASD Table

Relevant External Links for ZNF579 Gene

GeneLoc Exon Structure for
ZNF579
ECgene alternative splicing isoforms for
ZNF579

Expression for ZNF579 Gene

mRNA expression in normal human tissues for ZNF579 Gene

Protein differential expression in normal tissues from HIPED for ZNF579 Gene

This gene is overexpressed in Bone marrow stromal cell (20.9), Fetal Brain (17.9), and Adrenal (14.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for ZNF579 Gene



Protein tissue co-expression partners for ZNF579 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF579 Gene:

ZNF579

SOURCE GeneReport for Unigene cluster for ZNF579 Gene:

Hs.112529
genes like me logo Genes that share expression patterns with ZNF579: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF579 Gene

Orthologs for ZNF579 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF579 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF579 34 35
  • 99.55 (n)
dog
(Canis familiaris)
Mammalia ZNF579 34 35
  • 85.4 (n)
cow
(Bos Taurus)
Mammalia ZNF579 34
  • 83.76 (n)
mouse
(Mus musculus)
Mammalia Zfp579 34 16 35
  • 80.87 (n)
rat
(Rattus norvegicus)
Mammalia Zfp579 34
  • 80.61 (n)
Species where no ortholog for ZNF579 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF579 Gene

ENSEMBL:
Gene Tree for ZNF579 (if available)
TreeFam:
Gene Tree for ZNF579 (if available)

Paralogs for ZNF579 Gene

Paralogs for ZNF579 Gene

(11) SIMAP similar genes for ZNF579 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ZNF579: view

Variants for ZNF579 Gene

Sequence variations from dbSNP and Humsavar for ZNF579 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10403008 -- 55,578,581(+) GCCCC(C/G)TCGCC reference, missense
rs10413819 -- 55,582,105(+) atcat(G/T)actga upstream-variant-2KB
rs1053817 -- 55,577,853(-) CACCC(A/G)TCCCC intron-variant, utr-variant-3-prime
rs10643219 -- 55,578,544(+) TGCCC(-/GCC)TTCTC cds-indel
rs10683739 -- 55,582,364(+) TTTTG(-/TT/TTT)TTTGT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF579 Gene

Variant ID Type Subtype PubMed ID
nsv828643 CNV loss 20364138
nsv953624 CNV deletion 24416366

Variation tolerance for ZNF579 Gene

Gene Damage Index Score: 2.60; 45.08% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF579 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF579

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF579 Gene

Disorders for ZNF579 Gene

Relevant External Links for ZNF579

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF579

No disorders were found for ZNF579 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF579 Gene

Publications for ZNF579 Gene

  1. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PMID: 16964243) Beausoleil S.A. … Gygi S.P. (Nat. Biotechnol. 2006) 3 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression. (PMID: 25693804) Diner B.A. … Cristea I.M. (Mol. Cell Proteomics 2015) 3 64
  4. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  5. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein M.Y. … Mann M. (Cell 2015) 3 64

Products for ZNF579 Gene

Sources for ZNF579 Gene

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