Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF576 Gene

Aliases for ZNF576 Gene

  • Zinc Finger Protein 576 2 3 5

External Ids for ZNF576 Gene

Previous GeneCards Identifiers for ZNF576 Gene

  • GC19P048793
  • GC19P048794
  • GC19P044100
  • GC19P040531

Summaries for ZNF576 Gene

GeneCards Summary for ZNF576 Gene

ZNF576 (Zinc Finger Protein 576) is a Protein Coding gene. GO annotations related to this gene include RNA polymerase II transcription factor activity, sequence-specific DNA binding.

UniProtKB/Swiss-Prot for ZNF576 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF576 Gene

Genomics for ZNF576 Gene

Regulatory Elements for ZNF576 Gene

Enhancers for ZNF576 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G043560 1.6 FANTOM5 Ensembl ENCODE 13.7 -33.7 -33718 3.9 CBX3 KLF17 ZBTB40 RAD21 ZNF23 GLIS2 ZNF350 FOS ZNF391 IKZF2 ZNF575 ZNF180 ZNF45 ZNF284 ZNF224 ZNF225 IRGQ ETHE1 PLAUR ZNF230
GH19G043462 1.5 Ensembl ENCODE dbSUPER 10.9 -131.9 -131860 3.6 HDGF PKNOX1 SIN3A YY1 ZNF416 FOS SP3 ZHX2 SMARCB1 ZNF579 ZNF225 ZNF284 ZNF223 ZNF575 XRCC1 ZNF45 LOC100505715 PHLDB3 ETHE1 LYPD3
GH19G043555 0.8 ENCODE 13.2 -41.0 -41014 0.2 HDGF CTCF ARID4B ZNF2 RAD21 GLIS2 ZNF366 ZNF143 SMC3 PRDM10 XRCC1 PINLYP SRRM5 ZNF576 IRGQ ZNF575 ETHE1 ZNF428 ZNF45 ZNF225
GH19G043623 0.7 ENCODE 11.1 +27.6 27642 0.2 HDGF SP3 ZBTB2 SP2 ZNF662 E2F1 HIC1 EGR1 ZNF512 KLF9 IRGQ SRRM5 ZNF576 PLAUR XRCC1 PINLYP ZNF428 LOC105372410
GH19G043557 0.5 ENCODE 13.1 -38.8 -38839 0.3 OSR2 ZNF777 ZNF362 ZNF366 XRCC1 IRGQ SRRM5 ZNF576 ZNF428 PHLDB3 CADM4 GC19M043549 ENSG00000269583
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF576 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF576 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000109975 -492 2601 CREB3L1 AGO1 DMAP1 YY1 ZNF143 ZNF263 SP3 TBX21 MEF2D ZNF610

Genomic Location for ZNF576 Gene

Chromosome:
19
Start:
43,596,392 bp from pter
End:
43,601,157 bp from pter
Size:
4,766 bases
Orientation:
Plus strand

Genomic View for ZNF576 Gene

Genes around ZNF576 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF576 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF576 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF576 Gene

Proteins for ZNF576 Gene

  • Protein details for ZNF576 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H609-ZN576_HUMAN
    Recommended name:
    Zinc finger protein 576
    Protein Accession:
    Q9H609
    Secondary Accessions:
    • Q9BU03

    Protein attributes for ZNF576 Gene

    Size:
    170 amino acids
    Molecular mass:
    18890 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF576 Gene

Post-translational modifications for ZNF576 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF576 Gene

No data available for DME Specific Peptides for ZNF576 Gene

Domains & Families for ZNF576 Gene

Gene Families for ZNF576 Gene

Protein Domains for ZNF576 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ZNF576 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9H609

UniProtKB/Swiss-Prot:

ZN576_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF576: view

Function for ZNF576 Gene

Molecular function for ZNF576 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF576 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF576: view
genes like me logo Genes that share phenotypes with ZNF576: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF576 Gene

Localization for ZNF576 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF576 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF576 gene
Compartment Confidence
nucleus 5
golgi apparatus 2

Gene Ontology (GO) - Cellular Components for ZNF576 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF576: view

Pathways & Interactions for ZNF576 Gene

SuperPathways for ZNF576 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF576 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF576: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF576 Gene

Drugs & Compounds for ZNF576 Gene

No Compound Related Data Available

Transcripts for ZNF576 Gene

Unigene Clusters for ZNF576 Gene

Zinc finger protein 576:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF576 Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f · 1g ^ 2a · 2b ^ 3a · 3b · 3c · 3d
SP1: - - - - -
SP2: - - - - -
SP3: - -
SP4: -
SP5: -
SP6:

Relevant External Links for ZNF576 Gene

GeneLoc Exon Structure for
ZNF576
ECgene alternative splicing isoforms for
ZNF576

Expression for ZNF576 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF576 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF576 Gene:

ZNF576

SOURCE GeneReport for Unigene cluster for ZNF576 Gene:

Hs.11110

Evidence on tissue expression from TISSUES for ZNF576 Gene

  • Intestine(4.1)
  • Lung(4.1)
genes like me logo Genes that share expression patterns with ZNF576: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF576 Gene

Orthologs for ZNF576 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF576 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF576 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF576 34
  • 89.02 (n)
cow
(Bos Taurus)
Mammalia ZNF576 34 35
  • 88.43 (n)
zebrafish
(Danio rerio)
Actinopterygii ZNF576 (1 of 2) 35
  • 22 (a)
OneToMany
ZNF576 (2 of 2) 35
  • 2 (a)
OneToMany
Species where no ortholog for ZNF576 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF576 Gene

ENSEMBL:
Gene Tree for ZNF576 (if available)
TreeFam:
Gene Tree for ZNF576 (if available)

Paralogs for ZNF576 Gene

No data available for Paralogs for ZNF576 Gene

Variants for ZNF576 Gene

Sequence variations from dbSNP and Humsavar for ZNF576 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000301047 -- 43,596,524(+) CCCAC(G/T)TCTCT upstream-variant-2KB, utr-variant-5-prime
rs1001605966 -- 43,598,033(+) CAGGA(A/G)GCAGG intron-variant, upstream-variant-2KB
rs1004602656 -- 43,598,482(+) TGCCT(A/C)GGAAG intron-variant
rs1004888059 -- 43,597,778(+) CCCTT(G/T)AAACT intron-variant, upstream-variant-2KB
rs1004940607 -- 43,597,489(+) ATTGG(A/G)AGAGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF576 Gene

Variant ID Type Subtype PubMed ID
nsv833839 CNV loss 17160897

Variation tolerance for ZNF576 Gene

Residual Variation Intolerance Score: 67.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.30; 53.26% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF576 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF576

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF576 Gene

Disorders for ZNF576 Gene

Relevant External Links for ZNF576

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF576

No disorders were found for ZNF576 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF576 Gene

Publications for ZNF576 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  5. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3 64

Products for ZNF576 Gene

Sources for ZNF576 Gene

Content
Loading form....