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Aliases for ZNF571-AS1 Gene

Subcategory (RNA class) for ZNF571-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF571-AS1 Gene

  • ZNF571 Antisense RNA 1 2 3 5
  • CTD-3064H18.6 3

External Ids for ZNF571-AS1 Gene

Previous GeneCards Identifiers for ZNF571-AS1 Gene

  • GC19P038043

Summaries for ZNF571-AS1 Gene

GeneCards Summary for ZNF571-AS1 Gene

ZNF571-AS1 (ZNF571 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF571-AS1 Gene

Genomics for ZNF571-AS1 Gene

Regulatory Elements for ZNF571-AS1 Gene

Enhancers for ZNF571-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G038312 2 FANTOM5 Ensembl ENCODE dbSUPER 13.9 +768.7 768707 9.9 CREB3L1 DMAP1 YY1 ZNF143 SP3 NFYC MEF2D ZNF610 GLIS1 NBN C19orf33 CATSPERG SPINT2 ZNF607 ENSG00000269688 ZNF571-AS1 ZNF793-AS1 ZNF793 ZNF781 LOC100631378
GH19G037778 1.2 ENCODE 22 +230.5 230482 2.1 CREB3L1 DMAP1 FEZF1 YY1 ZNF416 ZNF143 ZNF548 SP3 ZNF610 GLIS1 ZNF793 ZNF383 ZNF345 ZNF585B ZNF781 LINC01535 ZNF607 ZNF790-AS1 ZNF571 ZNF585A
GH19G038262 1.4 ENCODE dbSUPER 14 +717.0 716952 6.7 HDGF FOXA2 PKNOX1 MLX AGO1 ZFP64 SIN3A ARID4B DMAP1 ZNF2 ZNF573 ZNF607 ZNF793 ZNF569 C19orf33 ZNF570 CATSPERG LOC100631378 PPP1R14A LOC284412
GH19G037653 1.2 ENCODE 14.1 +106.4 106368 2.9 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 ZNF383 ZNF567 ZNF345 ZNF585B ZNF850 ZNF571 LINC01535 ZNF585A ZNF607 ZNF790-AS1
GH19G038336 1.2 ENCODE 13.9 +787.5 787511 2.5 MLX DMAP1 YBX1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 NFYC C19orf33 ZNF793 ZNF607 ZNF571 ZNF569 ZNF573 CATSPERG ENSG00000267152 ZNF571-AS1 ZNF793-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF571-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF571-AS1 Gene

Chromosome:
19
Start:
37,548,914 bp from pter
End:
37,587,348 bp from pter
Size:
38,435 bases
Orientation:
Plus strand

Genomic View for ZNF571-AS1 Gene

Genes around ZNF571-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF571-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF571-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF571-AS1 Gene

Proteins for ZNF571-AS1 Gene

Post-translational modifications for ZNF571-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF571-AS1 Gene

Domains & Families for ZNF571-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF571-AS1 Gene

Function for ZNF571-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF571-AS1 Gene

Localization for ZNF571-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF571-AS1 Gene

Pathways & Interactions for ZNF571-AS1 Gene

SuperPathways for ZNF571-AS1 Gene

No Data Available

Interacting Proteins for ZNF571-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF571-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF571-AS1 Gene

Drugs & Compounds for ZNF571-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF571-AS1 Gene

mRNA/cDNA for ZNF571-AS1 Gene

(12) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF571-AS1 Gene

No ASD Table

Relevant External Links for ZNF571-AS1 Gene

GeneLoc Exon Structure for
ZNF571-AS1
ECgene alternative splicing isoforms for
ZNF571-AS1

Expression for ZNF571-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF571-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF571-AS1 Gene

This gene is overexpressed in Testis (x7.5), Brain - Nucleus accumbens (basal ganglia) (x5.0), and Brain - Putamen (basal ganglia) (x4.9).
genes like me logo Genes that share expression patterns with ZNF571-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF571-AS1 Gene

Orthologs for ZNF571-AS1 Gene

Evolution for ZNF571-AS1 Gene

ENSEMBL:
Gene Tree for ZNF571-AS1 (if available)
TreeFam:
Gene Tree for ZNF571-AS1 (if available)

No data available for Orthologs for ZNF571-AS1 Gene

Paralogs for ZNF571-AS1 Gene

No data available for Paralogs for ZNF571-AS1 Gene

Variants for ZNF571-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF571-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000033413 -- 37,549,428(+) AAGCG(G/T)TCTTT intron-variant, upstream-variant-2KB
rs1000104470 -- 37,556,768(+) AAAAG(A/G)TGAGA intron-variant
rs1000105307 -- 37,567,646(+) GCCAA(G/T)AATGC intron-variant, nc-transcript-variant
rs1000136509 -- 37,567,366(+) TGCTT(C/T)TCATA intron-variant
rs1000381410 -- 37,581,350(+) CAACA(C/T)GTCTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF571-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2718520 CNV deletion 23290073
esv2718521 CNV deletion 23290073
esv2758759 CNV loss 17122850
esv3355793 CNV insertion 20981092
nsv1134790 CNV deletion 24896259
nsv2478 CNV deletion 18451855
nsv579468 CNV gain 21841781
nsv833819 CNV gain 17160897
nsv953295 CNV deletion 24416366

Relevant External Links for ZNF571-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF571-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF571-AS1 Gene

Disorders for ZNF571-AS1 Gene

Relevant External Links for ZNF571-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF571-AS1

No disorders were found for ZNF571-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF571-AS1 Gene

Publications for ZNF571-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF571-AS1 Gene

Sources for ZNF571-AS1 Gene

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