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Aliases for ZNF57 Gene

Aliases for ZNF57 Gene

  • Zinc Finger Protein 57 2 3 5
  • Zinc Finger Protein 424 2 3 4
  • ZNF424 3 4

External Ids for ZNF57 Gene

Previous HGNC Symbols for ZNF57 Gene

  • ZNF424

Previous GeneCards Identifiers for ZNF57 Gene

  • GC19U990105
  • GC19P002852
  • GC19P002671

Summaries for ZNF57 Gene

GeneCards Summary for ZNF57 Gene

ZNF57 (Zinc Finger Protein 57) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF555.

UniProtKB/Swiss-Prot for ZNF57 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF57 Gene

Genomics for ZNF57 Gene

Regulatory Elements for ZNF57 Gene

Enhancers for ZNF57 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F002615 1.8 FANTOM5 Ensembl ENCODE 10.4 -273.3 -273273 24.4 HDGF PKNOX1 ARNT MLX CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 GADD45B SF3A2 GNG7 DIRAS1 LOC100288123 CACTIN-AS1 RNU6-993P SLC39A3 C19orf35 LOC101928631
GH19F002160 1.6 FANTOM5 ENCODE 9.8 -733.2 -733158 13.7 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 SP3 ZNF77 GADD45B DOT1L LOC100288123 SF3A2 ZNF554 ENSG00000267139 CIRBP ENSG00000267317 ADAT3
GH19F001901 1.5 FANTOM5 ENCODE 9.8 -996.9 -996927 5.0 HDGF PKNOX1 ARNT MLX CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF766 LOC100288123 TMEM259 SF3A2 ENSG00000267317 ADAT3 GRIN3B ZNF57 SCAMP4 CSNK1G2 DOT1L
GH19F002968 1.3 FANTOM5 ENCODE 11.3 +70.9 70860 6.7 PKNOX1 ARNT FEZF1 YY1 ZNF121 ZNF766 GLIS2 GATA2 ZNF263 NCOA1 TLE6 TLE2 AES ZNF77 GNA11 LOC101928631 ZNF57 S1PR4 NCLN SLC39A3
GH19F002949 1.2 ENCODE 11.1 +49.4 49382 2.3 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 FZR1 CACTIN LOC101928631 ZNF57 TLE6 ZNF77 SF3A2 C19orf35 ENSG00000279452 GC19M002947
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF57 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF57 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000042469 302 2001 HDGF PKNOX1 MLX CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 FOS

Genomic Location for ZNF57 Gene

Chromosome:
19
Start:
2,900,898 bp from pter
End:
2,918,646 bp from pter
Size:
17,749 bases
Orientation:
Plus strand

Genomic View for ZNF57 Gene

Genes around ZNF57 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF57 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF57 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF57 Gene

Proteins for ZNF57 Gene

  • Protein details for ZNF57 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q68EA5-ZNF57_HUMAN
    Recommended name:
    Zinc finger protein 57
    Protein Accession:
    Q68EA5
    Secondary Accessions:
    • Q8N6R9

    Protein attributes for ZNF57 Gene

    Size:
    555 amino acids
    Molecular mass:
    64428 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF57 Gene

Post-translational modifications for ZNF57 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF57 Gene

No data available for DME Specific Peptides for ZNF57 Gene

Domains & Families for ZNF57 Gene

Gene Families for ZNF57 Gene

Protein Domains for ZNF57 Gene

Suggested Antigen Peptide Sequences for ZNF57 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q68EA5

UniProtKB/Swiss-Prot:

ZNF57_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 13 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 13 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF57: view

Function for ZNF57 Gene

Molecular function for ZNF57 Gene

GENATLAS Biochemistry:
zinc finger protein 57 (C2H2 type,Kruppel-like)
UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF57 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF57: view
genes like me logo Genes that share phenotypes with ZNF57: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF57 Gene

Localization for ZNF57 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF57 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF57 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF57 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF57: view

Pathways & Interactions for ZNF57 Gene

SuperPathways for ZNF57 Gene

No Data Available

Interacting Proteins for ZNF57 Gene

Gene Ontology (GO) - Biological Process for ZNF57 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF57: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF57 Gene

Transcripts for ZNF57 Gene

mRNA/cDNA for ZNF57 Gene

Unigene Clusters for ZNF57 Gene

Zinc finger protein 57:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF57 Gene

No ASD Table

Relevant External Links for ZNF57 Gene

GeneLoc Exon Structure for
ZNF57
ECgene alternative splicing isoforms for
ZNF57

Expression for ZNF57 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF57 Gene

Protein differential expression in normal tissues from HIPED for ZNF57 Gene

This gene is overexpressed in Plasma (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZNF57 Gene



Protein tissue co-expression partners for ZNF57 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ZNF57 Gene:

ZNF57

SOURCE GeneReport for Unigene cluster for ZNF57 Gene:

Hs.591378
genes like me logo Genes that share expression patterns with ZNF57: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF57 Gene

Orthologs for ZNF57 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF57 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF57 34 35
  • 98.56 (n)
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 45 (a)
ManyToMany
-- 35
  • 41 (a)
ManyToMany
-- 35
  • 40 (a)
ManyToMany
-- 35
  • 39 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 42 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Zfp81 35
  • 40 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 40 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 38 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii CR388132.2 35
  • 35 (a)
ManyToMany
CT573234.2 35
  • 35 (a)
ManyToMany
Species where no ortholog for ZNF57 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF57 Gene

ENSEMBL:
Gene Tree for ZNF57 (if available)
TreeFam:
Gene Tree for ZNF57 (if available)

Paralogs for ZNF57 Gene

(481) SIMAP similar genes for ZNF57 Gene using alignment to 4 proteins:

Pseudogenes.org Pseudogenes for ZNF57 Gene

genes like me logo Genes that share paralogs with ZNF57: view

Variants for ZNF57 Gene

Sequence variations from dbSNP and Humsavar for ZNF57 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10409641 -- 2,911,259(+) ggcac(A/G)gtggc intron-variant
rs10410539 -- 2,917,614(+) CACAC(C/T)GGGGA intron-variant, reference, synonymous-codon
rs10412217 -- 2,911,394(+) tgggc(A/C)tgatg intron-variant
rs10413382 -- 2,911,898(+) tgtta(A/T)tcata intron-variant
rs10414256 -- 2,906,634(+) TGCTG(C/T)GTGGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF57 Gene

Variant ID Type Subtype PubMed ID
nsv960772 CNV duplication 23825009
nsv956564 CNV deletion 24416366
nsv821398 CNV deletion 20802225
nsv578419 CNV loss 21841781
nsv578418 CNV loss 21841781
nsv578417 CNV gain+loss 21841781
nsv578416 CNV gain 21841781
nsv512558 CNV loss 21212237
nsv511619 CNV loss 21212237
nsv1065985 CNV loss 25217958
nsv1063039 CNV loss 25217958
esv3643444 CNV loss 21293372
esv3643443 CNV loss 21293372
esv3643442 CNV loss 21293372
esv3643441 CNV loss 21293372
esv2762020 CNV loss 21179565
esv2717919 CNV deletion 23290073
esv2674415 CNV deletion 23128226
esv2658906 CNV deletion 23128226
esv2555501 CNV deletion 19546169
esv22112 CNV gain 19812545
esv1105151 CNV deletion 17803354
esv1000566 CNV deletion 20482838
dgv215e215 CNV deletion 23714750
dgv1689n106 CNV deletion 24896259

Variation tolerance for ZNF57 Gene

Residual Variation Intolerance Score: 88.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.31; 76.63% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF57 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF57

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF57 Gene

Disorders for ZNF57 Gene

Relevant External Links for ZNF57

Genetic Association Database (GAD)
ZNF57
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF57

No disorders were found for ZNF57 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF57 Gene

Publications for ZNF57 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  2. Clustering of C2-H2 zinc finger motif sequences within telomeric and fragile site regions of human chromosomes. (PMID: 1505991) Lichter P. … Ward D.C. (Genomics 1992) 2 3 64
  3. A Y2H-seq approach defines the human protein methyltransferase interactome. (PMID: 23455924) Weimann M. … Stelzl U. (Nat. Methods 2013) 3 64
  4. ZNF424, a novel human KRAB/C2H2 zinc finger protein, suppresses NFAT and p21 pathway. (PMID: 20356463) Wang Y. … Wu X. (BMB Rep 2010) 3 64
  5. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4 64

Products for ZNF57 Gene

Sources for ZNF57 Gene

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